CaUC05G106350.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G106350.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Annexin
Location	Ciama_Chr05: 36649760 .. 36650339 (-)
Sequence length	396
RNA-Seq Expression	CaUC05G106350.1
Synteny	CaUC05G106350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCTGCTGTCATTTTTCTAAGCATTATGCTGTCTTTGCTTTTGCTTGTGAACTTCTGCTATGCGGCAGAAGAAAGTGTTGATGAATTTCAGTCTGGGAAAGGTACTCCTTTTTTCTTTTTTCTTTTTTTTGGCACTTTGAGGTTCTTTAATCTTTGCTTGTTTTGCACCACTCCTTTTAATGAAAATTGTACTTCTCTTCACATATTATAATATATATATGTATACACCTTTTTTTTTTTTTGTCTAGATAAAATTTGTTAGTGAAGGGCATTTTGTTTATACAGATGCATCTGGTGTAACAGCTAAGAATGGAGAAGAAGAGCAAGAAGAGAAACTCAAGTTTCTTCATCACCACAAGCCATACTTCAAGAAACCATTTCTAAAGCCAATTCCATACAAGCATCCTTTTCTGAAGAAGCCAATTCCAGTTCATCCATTTCTCAAGAAACCAATTCCAGTTCACCCATTTCTTAAGAAACCAATTCCAGTTCACCCATTTCTCAAGAAGCCAATTCCAGTTCATCCATTCCTTAAGAAGCCAATTAATCCACCAGTCTTCCACACCCATCCTTGA

mRNA sequence

ATGAAACCTGCTGTCATTTTTCTAAGCATTATGCTGTCTTTGCTTTTGCTTGTGAACTTCTGCTATGCGGCAGAAGAAAGTGTTGATGAATTTCAGTCTGGGAAAGATGCATCTGGTGTAACAGCTAAGAATGGAGAAGAAGAGCAAGAAGAGAAACTCAAGTTTCTTCATCACCACAAGCCATACTTCAAGAAACCATTTCTAAAGCCAATTCCATACAAGCATCCTTTTCTGAAGAAGCCAATTCCAGTTCATCCATTTCTCAAGAAACCAATTCCAGTTCACCCATTTCTTAAGAAACCAATTCCAGTTCACCCATTTCTCAAGAAGCCAATTCCAGTTCATCCATTCCTTAAGAAGCCAATTAATCCACCAGTCTTCCACACCCATCCTTGA

Coding sequence (CDS)

ATGAAACCTGCTGTCATTTTTCTAAGCATTATGCTGTCTTTGCTTTTGCTTGTGAACTTCTGCTATGCGGCAGAAGAAAGTGTTGATGAATTTCAGTCTGGGAAAGATGCATCTGGTGTAACAGCTAAGAATGGAGAAGAAGAGCAAGAAGAGAAACTCAAGTTTCTTCATCACCACAAGCCATACTTCAAGAAACCATTTCTAAAGCCAATTCCATACAAGCATCCTTTTCTGAAGAAGCCAATTCCAGTTCATCCATTTCTCAAGAAACCAATTCCAGTTCACCCATTTCTTAAGAAACCAATTCCAGTTCACCCATTTCTCAAGAAGCCAATTCCAGTTCATCCATTCCTTAAGAAGCCAATTAATCCACCAGTCTTCCACACCCATCCTTGA

Protein sequence

MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHKPYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPINPPVFHTHP

Homology

[Close]

BLAST of CaUC05G106350.1 vs. NCBI nr
Match: XP_038893221.1 (uncharacterized protein LOC120082072 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 5.3e-52
Identity = 111/131 (84.73%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           MK A IFL I+LSLLL VNFCYAAEESV EFQSGK A+GVTAKNG EEQEEK KFLHHHK
Sbjct: 1   MKTAAIFLGIILSLLLFVNFCYAAEESVTEFQSGKGAAGVTAKNGGEEQEEKFKFLHHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PYFKKPFLKP+PYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKP P      K
Sbjct: 61  PYFKKPFLKPVPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPFP------K 120

Query: 121 PINPPVFHTHP 132
           PI PPVFH+HP
Sbjct: 121 PIKPPVFHSHP 125

[Close]

BLAST of CaUC05G106350.1 vs. NCBI nr
Match: ADN34202.1 (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 498

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 499 PIHPPVFHTHP 506

[Close]

BLAST of CaUC05G106350.1 vs. NCBI nr
Match: KAA0034746.1 (annexin [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 389 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 448

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 449 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 508

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 509 PIHPPVFHTHP 516

[Close]

BLAST of CaUC05G106350.1 vs. NCBI nr
Match: XP_008446928.1 (PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo] >TYK09299.1 annexin [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 120

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 121 PIHPPVFHTHP 128

[Close]

BLAST of CaUC05G106350.1 vs. NCBI nr
Match: XP_031741929.1 (repetitive proline-rich cell wall protein 1-like [Cucumis sativus] >KGN52301.1 hypothetical protein Csa_007763 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40
Identity = 99/131 (75.57%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           MK A IFL I+LS LLLVNFCYAAEESV EFQSGK A+GVTAKNGEEE +EK KFL HHK
Sbjct: 1   MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPI    F KKP+PVHPF KKPI        
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPI---VFEKKPLPVHPFFKKPID------- 118

Query: 121 PINPPVFHTHP 132
             +PPVFHTHP
Sbjct: 121 --HPPVFHTHP 118

[Close]

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL
Match: A0A5A7SY00 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007700 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.5e-52
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 389 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 448

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 449 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 508

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 509 PIHPPVFHTHP 516

[Close]

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL
Match: A0A5D3CG71 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.5e-52
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 120

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 121 PIHPPVFHTHP 128

[Close]

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL
Match: E5GCK5 (Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.5e-52
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 498

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 499 PIHPPVFHTHP 506

[Close]

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL
Match: A0A1S3BG81 (proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC103489493 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.5e-52
Identity = 111/131 (84.73%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           M+ A IFL I+LS LLLVNFCYAAEESV EFQ GK A+GVTAKNGEEEQEEK KFLHHHK
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 120

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 121 PIHPPVFHTHP 128

[Close]

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL
Match: A0A0A0KWW0 (ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 99/131 (75.57%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MKPAVIFLSIMLSLLLLVNFCYAAEESVDEFQSGKDASGVTAKNGEEEQEEKLKFLHHHK 60
           MK A IFL I+LS LLLVNFCYAAEESV EFQSGK A+GVTAKNGEEE +EK KFL HHK
Sbjct: 1   MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPI    F KKP+PVHPF KKPI        
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPI---VFEKKPLPVHPFFKKPID------- 118

Query: 121 PINPPVFHTHP 132
             +PPVFHTHP
Sbjct: 121 --HPPVFHTHP 118

The following BLAST results are available for this feature:

BLAST of CaUC05G106350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893221.1	5.3e-52	84.73	uncharacterized protein LOC120082072 [Benincasa hispida]	[more]
ADN34202.1	1.5e-51	84.73	annexin [Cucumis melo subsp. melo]	[more]
KAA0034746.1	1.5e-51	84.73	annexin [Cucumis melo var. makuwa]	[more]
XP_008446928.1	1.5e-51	84.73	PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo] >TYK...	[more]
XP_031741929.1	3.6e-40	75.57	repetitive proline-rich cell wall protein 1-like [Cucumis sativus] >KGN52301.1 h...	[more]

BLAST of CaUC05G106350.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY00	7.5e-52	84.73	Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007700 PE=3 S...	[more]
A0A5D3CG71	7.5e-52	84.73	Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 ...	[more]
E5GCK5	7.5e-52	84.73	Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3BG81	7.5e-52	84.73	proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KWW0	1.7e-40	75.57	ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 ...	[more]

BLAST of CaUC05G106350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC05G106350	CaUC05G106350	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G106350.1-exon	CaUC05G106350.1-exon-Ciama_Chr05:36649760..36650049	exon
CaUC05G106350.1-exon	CaUC05G106350.1-exon-Ciama_Chr05:36650234..36650339	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G106350.1-cds	CaUC05G106350.1-cds-Ciama_Chr05:36649760..36650049	CDS
CaUC05G106350.1-cds	CaUC05G106350.1-cds-Ciama_Chr05:36650234..36650339	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC05G106350.1	CaUC05G106350.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005544	calcium-dependent phospholipid binding
molecular_function	GO:0005509	calcium ion binding