CaUC05G102870.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G102870.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr05: 33732223 .. 33733153 (-)
Sequence length	174
RNA-Seq Expression	CaUC05G102870.1
Synteny	CaUC05G102870.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATACTAAGATATAATAACCATTCTGATTCTGATTCTAGTTGGTGGTCCTCTCCGGTAATTGATTTCTTCATAAGCTTTTTGGTGCACCACCAAATTCAAACAGAGATTCAATCTTCACAATTATGCTTTGGTCTAATGATGTTTCAACTCTGTATTTTAAATTCCAACTTGCTTCCTCAACTTGTATTTCCACTATCTTATCTTATTACCATAATATTTGTATTATCTTTTCACTTCTCTCTCTCTCTCTTCTTAGAATCTAATTTGGCTAACTTTATGTAACTTTTTCTTGTTGTATATGGGTTAATATATATATATATATATATATATATATATATATATAATTGAAATGGTTAGAATTTAGTCTTACCTATTATTTGATAAATAGGAAGTAAACTTTCGTATTTAGATAAATGTGTATGTTAAAATGGATTTGAATGGTCTTGAATTTTTTAGTTTAGATAGTAATTGGAATCTAGAATTTAAAAATAAACCATAAAAAAACCACAAGACTAAATTCTAACTTTCTTAGATTATACTAAATTTGTAATTTAACCCATTTTTTAAATCAAGTTAGTATTATAATAATATATGTAATACTAAAATATTATTTTATTAATAGAGTTAAATAGTTGAGTGAATAAAATATATGTGAAGATGTATCTACTATTTTATGTTACTCACCATCTTATATAAGTTTATTGTATTTGAAATCTATTAAAAAGCATTATTAGAGGAGGGATAATGAAGCAAAGTTTCAGGATGGTACTGCTTTTGGAATCAGTCCAAGAAATAGAGATATCTTTCAAGATGATGCAATTTTGATGGTACTGTTTTTGGAATTAGTCCAAGCTTTGTTTGAGAGAGTTTTGCCATTCTCTTGCAGGAAATGAGGGCAATTGAGTCAAGGTTGTTTTTGGAATTG

mRNA sequence

ATGTACATACTAAGATATAATAACCATTCTGATTCTGATTCTAGTTGGTGGTCCTCTCCGAATCTAATTTGGCTAACTTTATGTAACTTTTTCTTGTTGTATATGGGAAGTAAACTTTCGTATTTAGATAAATGTGAAATGAGGGCAATTGAGTCAAGGTTGTTTTTGGAATTG

Coding sequence (CDS)

ATGTACATACTAAGATATAATAACCATTCTGATTCTGATTCTAGTTGGTGGTCCTCTCCGAATCTAATTTGGCTAACTTTATGTAACTTTTTCTTGTTGTATATGGGAAGTAAACTTTCGTATTTAGATAAATGTGAAATGAGGGCAATTGAGTCAAGGTTGTTTTTGGAATTG

Protein sequence

MYILRYNNHSDSDSSWWSSPNLIWLTLCNFFLLYMGSKLSYLDKCEMRAIESRLFLEL

Homology

The following BLAST results are available for this feature:

BLAST of CaUC05G102870.1 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC05G102870.1 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC05G102870.1 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC05G102870.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC05G102870	CaUC05G102870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G102870.1-exon	CaUC05G102870.1-exon-Ciama_Chr05:33732223..33732261	exon
CaUC05G102870.1-exon	CaUC05G102870.1-exon-Ciama_Chr05:33732731..33732759	exon
CaUC05G102870.1-exon	CaUC05G102870.1-exon-Ciama_Chr05:33732846..33732891	exon
CaUC05G102870.1-exon	CaUC05G102870.1-exon-Ciama_Chr05:33733094..33733153	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G102870.1-cds	CaUC05G102870.1-cds-Ciama_Chr05:33732223..33732261	CDS
CaUC05G102870.1-cds	CaUC05G102870.1-cds-Ciama_Chr05:33732731..33732759	CDS
CaUC05G102870.1-cds	CaUC05G102870.1-cds-Ciama_Chr05:33732846..33732891	CDS
CaUC05G102870.1-cds	CaUC05G102870.1-cds-Ciama_Chr05:33733094..33733153	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC05G102870.1	CaUC05G102870.1-protein	polypeptide