CaUC05G096970.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G096970.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr05: 28298873 .. 28301807 (-)
Sequence length	1041
RNA-Seq Expression	CaUC05G096970.1
Synteny	CaUC05G096970.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTACATGGAAAGCGATACTGGGCCCACTACTGCAATAGCCATAGTCGCTTACCAAACTAGACCACTCACTAAATGGGCCGTCGAGGGGCCCATTAAGTAGACGTCAAAAGGACGCTTATACCCCCATGACTGGAAACATTTTTTCTATCATGTACACATCTTTTTAATTCTTACAATAATTCATCTGGCACTCATACCGTAGTAAAATCGTATAATCAAATGATGGGCTGAAACTGTAGAACGTTCCTCAGCCGTCGATCATCGACCGTACCAAACACTCCAATCCAATGGCCGATATCGCAGAAGCCGCCATTTCTTTCTTCTTGCAGCTGCAGAGTGGGACCATTGACGAGAGTCTTCAGTTGAGCTTCTAAGAAAAGAATCCCTCTGTATATTTACACACTCAATTCCTCTTCCTCTATACCATCTCTGATCTTCTTTAGCCCTTTCGTTCTCTCTTTCGCCGCCATTCTTGCTCCGAAGAGAAACCGAAGAAAAGTGTTTTCAAAAAGTTCATCATTCGATATCTTTTTCTCCATATTTTTTCCAGAAGAAGGTGAAGATGTGGTCGAATTGAAGTTCGGTGTTGCCATTATTCTGTACTTCTTAGGTTGGGTTTAAAGCTTTTCGACTTTTATGAATTTCTTTGGTGTCCTTATGATGGATTCTGTTCTGCTTTCTCTTCATTTTCTTTAAGAAGCAAACTACAAAAGATCCGAACATTTTTTTGGCATGTATTTGGATTTTGGCAATTCCCTTTTGTTTGGTTTGTTCATTTTAACCTTTTCCCAATCTTCCATTTTAGTTGATTGAGATGCATTGTAACCGGCTTGTTGTTCAGGTCATTAGCTTTGGAACAGGACCATTTTGTAGAAAGCAATCGAAAAAGAAAGTACATTGAGATCCACCTTCTATGAGGATGGATTATTGCATATGCCCTTTGGATTCTTTTGCTATGTTCTTTTAATGGTCTTTTTATAGAGAAGTGTTCCTTGAAGGTCAGATATTCGGTTCCTTTTGTGCATTATTGTTTGTAGGCAGTTCCATAATTTGGTATCTCACGCATTCAATTGTACGTCCCTTTCATTTAGTTGTCCTAGATGATTCTGGGGTTTCTTCCTTTTATTTTCCCTTTCTTTTTGTAGTATTTTGATAGTTTATCTACTTTTGAGTATCATCCAATATCCAACTTATATTGTTATATACATTGTTTTGTTGTTAATTAGCTAATTATTCTTTCTTACTCAATAATTCCAAAATCCTGTAGTTCTAGATTGTGACACAAGCACAGTAGGATCTATTAAAATGTTGATTTTCTCAGGTTCAATTAATCATGATCATATATATCTTTAGGTTGCTTTTGGACCTTACTACTCAATCTTGTCCATCTTATTTATGTTTGTTTAACATCTAAAAAGTTCCAACTCATAATCATGAAAATGTTGCCCTAGGCTGAGTCGATAACATTGAATAGAAAAACGAAAAGGAAATAAGGAAGACAAAGAAATGCTTCTTCAAAACTGCATGACAAGTGATACTTACCCTGGGTAATCACTGCTTTCTTTTCCTTGAGCCAGAGAGTAAGAACATCATTGACCTGAAGGGTTCTAATATATAAATATAATCATGAGTGCAGATTTGATCGAGTGCAAAAGCAAAAGCGCTTCTTGTAGTCAAGACTATAACTTAGCAAATTTCCAAGTTGAGATTAATAGTTGTTTGGTTCAACGTTGAAGATATTCCAGGTATCCTTCATCTACCCATAAAGTTTTTTGGATGTGAATTTGTGATTTTCATAGTCTTATCTCTACATTTGGTAACTTCACTGTAGTCTAGTCCATACTGTTTCTCATTAGGGAAAAAAAAACTGTAATCTAGTATGTTTTTCATAGTCCCTGTATTCTGTTATCCAAATTCTCGTGCTAGGTATTTGATAGTGACACTGATGACTGACCATTGGTCTAATGGTAAGTTTTTTCACTTATAGCTCCTCATATGTCCCTTAATTGGTGCTGATTGGTTTATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACGGGGATCAAAGTAATCGATATGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCAAAAGTTTGCTGTTCAAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTGGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGCTTGGAACAGATTCATCTGAAAATGATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCTTGGATTGCTCCATACGTTCATGTAAAATCTGAAATTTCGGTGCCTGCTGATGGCGTGTTGATGGAGAGGGGAAGCTACAGTACATAATCTAACAATAAATCTAAGAGAAACTCTGTTCAAAGATATGAAGTGGACAATCAAGATACTCATGCATCAATGCAGCCTAGAAGTCTTTGCCAAACATCAAACAGTGGTTCCAGTTGGTACAATTCGAGAAACCTCACATGTGATTCAGTATCTAAAGTAATTCCATCAGATAGTTCTTTGCTGGAGCCCAACCTTGTGAGAAGGAAGAATGTAACGAAGAAGATGCTCTATGATGGCGAGTACAATTCCAGTTCTAGAGGAAAGAAGGCGAGTGGAACCTCCCAAGGACAAAAGTGTGTGTATTGGCATGACATTTCTATTTCTGATAAACAACCAGGTCGAAATGTGTTTCACAGGCAAAATGTTCTTTCATCACATGGGACTCGAAGTTTGACAAGTGTATGCAATGGGGCAAGGCATTAG

mRNA sequence

ATGGCCTACATGGAAAGCGATACTGGGCCCACTACTGCAATAGCCATAGTCGCTTACCAAACTAGACCACTCACTAAATGGGCCGTCGAGGGGCCCATTAAAACGTTCCTCAGCCGTCGATCATCGACCGTACCAAACACTCCAATCCAATGGCCGATATCGCAGAAGCCGCCATTTCTTTCTTCTTGCAGCTGCAGAGTGGGACCATTGACGAGAGTCTTCATGATACTTACCCTGGGTAATCACTGCTTTCTTTTCCTTGAGCCAGAGATCCCTGTATTCTGTTATCCAAATTCTCGTGCTAGGTATTTGATAGTGACACTGATGACTGACCATTGGTCTAATGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACGGGGATCAAAGTAATCGATATGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCAAAAAAATCTCAGGAATCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGCTTGGAACAGATTCATCTGAAAATGATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCTTGGATTGCTCCATACGTTCATATATGAAGTGGACAATCAAGATACTCATGCATCAATGCAGCCTAGAAGTCTTTGCCAAACATCAAACAGTGGTTCCAGTTGGTACAATTCGAGAAACCTCACATGTGATTCAGTATCTAAAGTAATTCCATCAGATAGTTCTTTGCTGGAGCCCAACCTTGTGAGAAGGAAGAATGTAACGAAGAAGATGCTCTATGATGGCGAGTACAATTCCAGTTCTAGAGGAAAGAAGGCGAGTGGAACCTCCCAAGGACAAAAGTGTGTGTATTGGCATGACATTTCTATTTCTGATAAACAACCAGGTCGAAATGTGTTTCACAGGCAAAATGTTCTTTCATCACATGGGACTCGAAGTTTGACAAGTGTATGCAATGGGGCAAGGCATTAG

Coding sequence (CDS)

ATGGCCTACATGGAAAGCGATACTGGGCCCACTACTGCAATAGCCATAGTCGCTTACCAAACTAGACCACTCACTAAATGGGCCGTCGAGGGGCCCATTAAAACGTTCCTCAGCCGTCGATCATCGACCGTACCAAACACTCCAATCCAATGGCCGATATCGCAGAAGCCGCCATTTCTTTCTTCTTGCAGCTGCAGAGTGGGACCATTGACGAGAGTCTTCATGATACTTACCCTGGGTAATCACTGCTTTCTTTTCCTTGAGCCAGAGATCCCTGTATTCTGTTATCCAAATTCTCGTGCTAGGTATTTGATAGTGACACTGATGACTGACCATTGGTCTAATGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACGGGGATCAAAGTAATCGATATGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCAAAAAAATCTCAGGAATCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGCTTGGAACAGATTCATCTGAAAATGATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCTTGGATTGCTCCATACGTTCATATATGAAGTGGACAATCAAGATACTCATGCATCAATGCAGCCTAGAAGTCTTTGCCAAACATCAAACAGTGGTTCCAGTTGGTACAATTCGAGAAACCTCACATGTGATTCAGTATCTAAAGTAATTCCATCAGATAGTTCTTTGCTGGAGCCCAACCTTGTGAGAAGGAAGAATGTAACGAAGAAGATGCTCTATGATGGCGAGTACAATTCCAGTTCTAGAGGAAAGAAGGCGAGTGGAACCTCCCAAGGACAAAAGTGTGTGTATTGGCATGACATTTCTATTTCTGATAAACAACCAGGTCGAAATGTGTTTCACAGGCAAAATGTTCTTTCATCACATGGGACTCGAAGTTTGACAAGTGTATGCAATGGGGCAAGGCATTAG

Protein sequence

MAYMESDTGPTTAIAIVAYQTRPLTKWAVEGPIKTFLSRRSSTVPNTPIQWPISQKPPFLSSCSCRVGPLTRVFMILTLGNHCFLFLEPEIPVFCYPNSRARYLIVTLMTDHWSNEFLMDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGAKKSQESFPWAFGKLSSKLGTDSSENDSIHDELEELEFISPLGLLHTFIYEVDNQDTHASMQPRSLCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSSSRGKKASGTSQGQKCVYWHDISISDKQPGRNVFHRQNVLSSHGTRSLTSVCNGARH

Homology

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BLAST of CaUC05G096970.1 vs. NCBI nr
Match: XP_004136311.1 (uncharacterized protein LOC101218753 [Cucumis sativus] >XP_011652530.1 uncharacterized protein LOC101218753 [Cucumis sativus] >XP_031738824.1 uncharacterized protein LOC101218753 [Cucumis sativus] >XP_031738825.1 uncharacterized protein LOC101218753 [Cucumis sativus] >XP_031738826.1 uncharacterized protein LOC101218753 [Cucumis sativus] >XP_031738827.1 uncharacterized protein LOC101218753 [Cucumis sativus] >KAE8651379.1 hypothetical protein Csa_001164 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 2.8e-84
Identity = 179/292 (61.30%), Postives = 199/292 (68.15%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MDGYSSKRVH+GIVSRKG GVVLRDNMKH DQSN+  NR GC GRICSSSGA        
Sbjct: 1   MDGYSSKRVHVGIVSRKGPGVVLRDNMKHRDQSNKCSNRPGCNGRICSSSGAQVGCSSKF 60

Query: 179 ---------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEELEFIS 238
                                +  ++SFP  FGKLSSKL TDSSENDSI D+LEELEFIS
Sbjct: 61  SSKRPFHSSSGKEGFGSSSGIQNLRKSFPDPFGKLSSKLETDSSENDSIQDDLEELEFIS 120

Query: 239 PLGLLHTFI-----------------------------------YEVDNQDTHASMQPRS 298
           P GL HT +                                   YEVDN+D HASM+PRS
Sbjct: 121 PHGLFHTGLHAKSESPVVANAMLMERGSCSTDSSNISKRVSIQSYEVDNEDPHASMRPRS 180

Query: 299 LCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSSSRGK 347
           LCQ SN  SS YNSRNLTCDSVS+VIPS++SLLE NLVRRKNV KKM +DGE +SSSRGK
Sbjct: 181 LCQKSNGSSSRYNSRNLTCDSVSEVIPSNNSLLESNLVRRKNVMKKMTFDGENSSSSRGK 240

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BLAST of CaUC05G096970.1 vs. NCBI nr
Match: XP_016903484.1 (PREDICTED: uncharacterized protein LOC103503755 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-83
Identity = 179/292 (61.30%), Postives = 200/292 (68.49%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MDGYSSKRVH+GIVSRKG GVVLRDNMK  DQSN+Y NR GCTGRICSSSGA        
Sbjct: 1   MDGYSSKRVHVGIVSRKGPGVVLRDNMKDRDQSNQYSNRPGCTGRICSSSGAQVGCSSKF 60

Query: 179 ---------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEELEFIS 238
                                +  ++SFP  FGKL SKL  DSSE+DSIHDELEELE IS
Sbjct: 61  SSKRPFCSSSGKEGLGSSSGIQNLRKSFPDPFGKLPSKLEIDSSESDSIHDELEELELIS 120

Query: 239 PLGLLHTFI-----------------------------------YEVDNQDTHASMQPRS 298
           P GL HT +                                   YEVDN+D HASM+PRS
Sbjct: 121 PHGLFHTGLHAKSESPVLTNAMLMERGSCSTDFGNVSKRISIQSYEVDNEDPHASMRPRS 180

Query: 299 LCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSSSRGK 347
           LCQ SN  SS Y+SRNLT DSVS+VIPS++SLLEPNLVRRKNVTKKM +DGE +SSSRGK
Sbjct: 181 LCQKSNGSSSSYSSRNLTSDSVSEVIPSNNSLLEPNLVRRKNVTKKMPFDGENSSSSRGK 240

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BLAST of CaUC05G096970.1 vs. NCBI nr
Match: KAA0038754.1 (E3 ubiquitin-protein ligase MBR2 [Cucumis melo var. makuwa] >TYK31367.1 E3 ubiquitin-protein ligase MBR2 [Cucumis melo var. makuwa])

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-83
Identity = 179/292 (61.30%), Postives = 200/292 (68.49%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MDGYSSKRVH+GIVSRKG GVVLRDNMK  DQSN+Y NR GCTGRICSSSGA        
Sbjct: 1   MDGYSSKRVHVGIVSRKGPGVVLRDNMKDRDQSNQYSNRPGCTGRICSSSGAQVGCSSKF 60

Query: 179 ---------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEELEFIS 238
                                +  ++SFP  FGKL SKL  DSSE+DSIHDELEELE IS
Sbjct: 61  SSKRPFCSSSGKEGLGSSSGIQNLRKSFPDPFGKLPSKLEIDSSESDSIHDELEELELIS 120

Query: 239 PLGLLHTFI-----------------------------------YEVDNQDTHASMQPRS 298
           P GL HT +                                   YEVDN+D HASM+PRS
Sbjct: 121 PHGLFHTGLHAKSESPVLTNAMLMERGSCSTDFGNVSKRISIQSYEVDNEDPHASMRPRS 180

Query: 299 LCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSSSRGK 347
           LCQ SN  SS Y+SRNLT DSVS+VIPS++SLLEPNLVRRKNVTKKM +DGE +SSSRGK
Sbjct: 181 LCQKSNGSSSSYSSRNLTSDSVSEVIPSNNSLLEPNLVRRKNVTKKMPFDGENSSSSRGK 240

[Close]

BLAST of CaUC05G096970.1 vs. NCBI nr
Match: XP_022940547.1 (uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940548.1 uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940549.1 uncharacterized protein LOC111446115 [Cucurbita moschata])

HSP 1 Score: 313.2 bits (801), Expect = 2.9e-81
Identity = 175/296 (59.12%), Postives = 197/296 (66.55%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MD YSSKRVHMGIVSRKG GVVLRDN+K+ DQSNRY NRLGCTGRIC++SG         
Sbjct: 1   MDEYSSKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRICTTSGVQVGCSNKT 60

Query: 179 -------------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEEL 238
                                    +  ++SFP  F KLSSKL TDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVVGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 239 EFISPLGLLHTFI-----------------------------------YEVDNQDTHASM 298
           EFISP  L HT +                                   +EVDNQD+HASM
Sbjct: 121 EFISPPVLFHTGLQVKSESSLPANTSLMERGSCSTDANTESKRNSVQRFEVDNQDSHASM 180

Query: 299 QPRSLCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSS 347
           QPRSLCQTSN G+S Y+SRN  CDSVS++IPSD SLLE NLVRRKNVTKKM+YDGE +S 
Sbjct: 181 QPRSLCQTSNGGNSRYSSRNFPCDSVSEIIPSDGSLLERNLVRRKNVTKKMIYDGENSSH 240

[Close]

BLAST of CaUC05G096970.1 vs. NCBI nr
Match: XP_023524149.1 (uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524150.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524151.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524152.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.4 bits (799), Expect = 4.9e-81
Identity = 174/296 (58.78%), Postives = 198/296 (66.89%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MD YSSKRVHMGIVSRKG GVVLRDN+K+ DQSNRY NRLGCTGR+C++SG         
Sbjct: 1   MDEYSSKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRVCTTSGVQVGCSNKT 60

Query: 179 -------------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEEL 238
                                    +  ++SFP  F KLSSKL TDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVLGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 239 EFISPLGLLHTFI-----------------------------------YEVDNQDTHASM 298
           EFISP  L HT +                                   +EVDNQD+HASM
Sbjct: 121 EFISPPVLFHTGLQVKSESSLPADTLLMERGSCSTDANTESKRNSVQRFEVDNQDSHASM 180

Query: 299 QPRSLCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSS 347
           QPRSLCQTSN G+S Y+SR+L CDSVS++IPSD SLLE NLVRRKNVTKKM+YDGE +S 
Sbjct: 181 QPRSLCQTSNGGNSRYSSRSLPCDSVSEIIPSDGSLLERNLVRRKNVTKKMIYDGENSSH 240

[Close]

BLAST of CaUC05G096970.1 vs. ExPASy TrEMBL
Match: A0A0A0LJG2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G881840 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 185/314 (58.92%), Postives = 211/314 (67.20%), Query Frame = 0


Query: 100 RARYLIVTLMTDHW---SNEFLMDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDN 159
           ++ Y ++ ++   W   S EFLMDGYSSKRVH+GIVSRKG GVVLRDNMKH DQSN+  N
Sbjct: 38  QSMYFVIQILVQDWFIDSKEFLMDGYSSKRVHVGIVSRKGPGVVLRDNMKHRDQSNKCSN 97

Query: 160 RLGCTGRICSSSGA-----------------------------KKSQESFPWAFGKLSSK 219
           R GC GRICSSSGA                             +  ++SFP  FGKLSSK
Sbjct: 98  RPGCNGRICSSSGAQVGCSSKFSSKRPFHSSSGKEGFGSSSGIQNLRKSFPDPFGKLSSK 157

Query: 220 LGTDSSENDSIHDELEELEFISPLGLLHTFI----------------------------- 279
           L TDSSENDSI D+LEELEFISP GL HT +                             
Sbjct: 158 LETDSSENDSIQDDLEELEFISPHGLFHTGLHAKSESPVVANAMLMERGSCSTDSSNISK 217

Query: 280 ------YEVDNQDTHASMQPRSLCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLV 339
                 YEVDN+D HASM+PRSLCQ SN  SS YNSRNLTCDSVS+VIPS++SLLE NLV
Sbjct: 218 RVSIQSYEVDNEDPHASMRPRSLCQKSNGSSSRYNSRNLTCDSVSEVIPSNNSLLESNLV 277

Query: 340 RRKNVTKKMLYDGEYNSSSRGKKASGTSQGQKCVYWHDISISDKQPGRNVFHRQNVLSSH 347
           RRKNV KKM +DGE +SSSRGKK SGTS+GQKC+Y H ISISD+ PGRNVFHR+N+LSSH
Sbjct: 278 RRKNVMKKMTFDGENSSSSRGKKVSGTSRGQKCIYRHGISISDQIPGRNVFHRKNILSSH 337

[Close]

BLAST of CaUC05G096970.1 vs. ExPASy TrEMBL
Match: A0A5D3E5H2 (E3 ubiquitin-protein ligase MBR2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006730 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 6.7e-84
Identity = 179/292 (61.30%), Postives = 200/292 (68.49%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MDGYSSKRVH+GIVSRKG GVVLRDNMK  DQSN+Y NR GCTGRICSSSGA        
Sbjct: 1   MDGYSSKRVHVGIVSRKGPGVVLRDNMKDRDQSNQYSNRPGCTGRICSSSGAQVGCSSKF 60

Query: 179 ---------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEELEFIS 238
                                +  ++SFP  FGKL SKL  DSSE+DSIHDELEELE IS
Sbjct: 61  SSKRPFCSSSGKEGLGSSSGIQNLRKSFPDPFGKLPSKLEIDSSESDSIHDELEELELIS 120

Query: 239 PLGLLHTFI-----------------------------------YEVDNQDTHASMQPRS 298
           P GL HT +                                   YEVDN+D HASM+PRS
Sbjct: 121 PHGLFHTGLHAKSESPVLTNAMLMERGSCSTDFGNVSKRISIQSYEVDNEDPHASMRPRS 180

Query: 299 LCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSSSRGK 347
           LCQ SN  SS Y+SRNLT DSVS+VIPS++SLLEPNLVRRKNVTKKM +DGE +SSSRGK
Sbjct: 181 LCQKSNGSSSSYSSRNLTSDSVSEVIPSNNSLLEPNLVRRKNVTKKMPFDGENSSSSRGK 240

[Close]

BLAST of CaUC05G096970.1 vs. ExPASy TrEMBL
Match: A0A1S4E5I3 (uncharacterized protein LOC103503755 OS=Cucumis melo OX=3656 GN=LOC103503755 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 6.7e-84
Identity = 179/292 (61.30%), Postives = 200/292 (68.49%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MDGYSSKRVH+GIVSRKG GVVLRDNMK  DQSN+Y NR GCTGRICSSSGA        
Sbjct: 1   MDGYSSKRVHVGIVSRKGPGVVLRDNMKDRDQSNQYSNRPGCTGRICSSSGAQVGCSSKF 60

Query: 179 ---------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEELEFIS 238
                                +  ++SFP  FGKL SKL  DSSE+DSIHDELEELE IS
Sbjct: 61  SSKRPFCSSSGKEGLGSSSGIQNLRKSFPDPFGKLPSKLEIDSSESDSIHDELEELELIS 120

Query: 239 PLGLLHTFI-----------------------------------YEVDNQDTHASMQPRS 298
           P GL HT +                                   YEVDN+D HASM+PRS
Sbjct: 121 PHGLFHTGLHAKSESPVLTNAMLMERGSCSTDFGNVSKRISIQSYEVDNEDPHASMRPRS 180

Query: 299 LCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSSSRGK 347
           LCQ SN  SS Y+SRNLT DSVS+VIPS++SLLEPNLVRRKNVTKKM +DGE +SSSRGK
Sbjct: 181 LCQKSNGSSSSYSSRNLTSDSVSEVIPSNNSLLEPNLVRRKNVTKKMPFDGENSSSSRGK 240

[Close]

BLAST of CaUC05G096970.1 vs. ExPASy TrEMBL
Match: A0A6J1FKJ9 (uncharacterized protein LOC111446115 OS=Cucurbita moschata OX=3662 GN=LOC111446115 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 175/296 (59.12%), Postives = 197/296 (66.55%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MD YSSKRVHMGIVSRKG GVVLRDN+K+ DQSNRY NRLGCTGRIC++SG         
Sbjct: 1   MDEYSSKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRICTTSGVQVGCSNKT 60

Query: 179 -------------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEEL 238
                                    +  ++SFP  F KLSSKL TDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVVGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 239 EFISPLGLLHTFI-----------------------------------YEVDNQDTHASM 298
           EFISP  L HT +                                   +EVDNQD+HASM
Sbjct: 121 EFISPPVLFHTGLQVKSESSLPANTSLMERGSCSTDANTESKRNSVQRFEVDNQDSHASM 180

Query: 299 QPRSLCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSS 347
           QPRSLCQTSN G+S Y+SRN  CDSVS++IPSD SLLE NLVRRKNVTKKM+YDGE +S 
Sbjct: 181 QPRSLCQTSNGGNSRYSSRNFPCDSVSEIIPSDGSLLERNLVRRKNVTKKMIYDGENSSH 240

[Close]

BLAST of CaUC05G096970.1 vs. ExPASy TrEMBL
Match: A0A6J1J3B4 (uncharacterized protein LOC111480963 OS=Cucurbita maxima OX=3661 GN=LOC111480963 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81
Identity = 175/296 (59.12%), Postives = 197/296 (66.55%), Query Frame = 0


Query: 119 MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNRYDNRLGCTGRICSSSGA-------- 178
           MD Y+SKRVHMGIVSRKG GVVLRDN+K+ DQSNRY NRLGCTGRIC++SG         
Sbjct: 1   MDEYASKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRICTTSGVQVGCSNKT 60

Query: 179 -------------------------KKSQESFPWAFGKLSSKLGTDSSENDSIHDELEEL 238
                                    +  ++SFP  F KLSSKL TDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVVGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 239 EFISPLGLLHTFI-----------------------------------YEVDNQDTHASM 298
           EFISP  L HT +                                   +EVD QD+HASM
Sbjct: 121 EFISPPVLFHTGLQVKSESSLPADTLLMERGGCSTDANTESKRNSVQRFEVDCQDSHASM 180

Query: 299 QPRSLCQTSNSGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLYDGEYNSS 347
           QPRSLCQTSN G+S Y+SRNL CDSVS++IPSD SLLE NLVRRKNVTKKM+YDGE +S 
Sbjct: 181 QPRSLCQTSNGGNSRYSSRNLPCDSVSEIIPSDGSLLERNLVRRKNVTKKMIYDGENSSH 240

[Close]

BLAST of CaUC05G096970.1 vs. TAIR 10
Match: AT5G10650.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.6e-08
Identity = 80/305 (26.23%), Postives = 115/305 (37.70%), Query Frame = 0


Query: 119 MDGYSSKR-VHMGIVSRKGLGVVLRDNMKHGDQSN-RYDNRLGCTGRICSSSGAK----- 178
           MDG + KR V   +V RK  G+ LR+NM   D  N  + +R+GCT ++ S+  ++     
Sbjct: 1   MDGCAGKRSVDRLVVPRKASGLTLRENMNKTDGKNVPFCSRVGCTAKVTSTKRSRIGSTD 60

Query: 179 --------------------KSQESFPWAFGKL------------SSKLGTDSSENDSIH 238
                                S    P  FG L            SS L T+SSE   IH
Sbjct: 61  NNTKVGLPPVPSTLNRKEIVGSSSRTPGGFGYLRKPAKVTARRQPSSSLDTESSETSCIH 120

Query: 239 DELEELEFISPLGLLHTFIYEVDNQD--------THASMQPRSLCQTSN----------- 298
           D+    E   P          V  Q         T A    R   + S+           
Sbjct: 121 DDPAATEPTLPRQKTKRVTINVHPQSAVSREVVITKAGSSSRGTSRISHPKSELGTRDAL 180

Query: 299 -----------------SGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLY 346
                             G S +  RNL+C+SVS V+P++S     N   + +VTKK   
Sbjct: 181 TGPSVSTSSGNSEHTVRGGLSRHRLRNLSCNSVSDVLPTNS-----NSATKISVTKKKNA 240

[Close]

BLAST of CaUC05G096970.1 vs. TAIR 10
Match: AT5G10650.2 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.6e-08
Identity = 80/305 (26.23%), Postives = 115/305 (37.70%), Query Frame = 0


Query: 119 MDGYSSKR-VHMGIVSRKGLGVVLRDNMKHGDQSN-RYDNRLGCTGRICSSSGAK----- 178
           MDG + KR V   +V RK  G+ LR+NM   D  N  + +R+GCT ++ S+  ++     
Sbjct: 1   MDGCAGKRSVDRLVVPRKASGLTLRENMNKTDGKNVPFCSRVGCTAKVTSTKRSRIGSTD 60

Query: 179 --------------------KSQESFPWAFGKL------------SSKLGTDSSENDSIH 238
                                S    P  FG L            SS L T+SSE   IH
Sbjct: 61  NNTKVGLPPVPSTLNRKEIVGSSSRTPGGFGYLRKPAKVTARRQPSSSLDTESSETSCIH 120

Query: 239 DELEELEFISPLGLLHTFIYEVDNQD--------THASMQPRSLCQTSN----------- 298
           D+    E   P          V  Q         T A    R   + S+           
Sbjct: 121 DDPAATEPTLPRQKTKRVTINVHPQSAVSREVVITKAGSSSRGTSRISHPKSELGTRDAL 180

Query: 299 -----------------SGSSWYNSRNLTCDSVSKVIPSDSSLLEPNLVRRKNVTKKMLY 346
                             G S +  RNL+C+SVS V+P++S     N   + +VTKK   
Sbjct: 181 TGPSVSTSSGNSEHTVRGGLSRHRLRNLSCNSVSDVLPTNS-----NSATKISVTKKKNA 240

The following BLAST results are available for this feature:

BLAST of CaUC05G096970.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136311.1	2.8e-84	61.30	uncharacterized protein LOC101218753 [Cucumis sativus] >XP_011652530.1 uncharact...	[more]
XP_016903484.1	1.4e-83	61.30	PREDICTED: uncharacterized protein LOC103503755 [Cucumis melo]	[more]
KAA0038754.1	1.4e-83	61.30	E3 ubiquitin-protein ligase MBR2 [Cucumis melo var. makuwa] >TYK31367.1 E3 ubiqu...	[more]
XP_022940547.1	2.9e-81	59.12	uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940548.1 unchar...	[more]
XP_023524149.1	4.9e-81	58.78	uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524150....	[more]

BLAST of CaUC05G096970.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC05G096970.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJG2	1.2e-88	58.92	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G881840 P...	[more]
A0A5D3E5H2	6.7e-84	61.30	E3 ubiquitin-protein ligase MBR2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4E5I3	6.7e-84	61.30	uncharacterized protein LOC103503755 OS=Cucumis melo OX=3656 GN=LOC103503755 PE=...	[more]
A0A6J1FKJ9	1.4e-81	59.12	uncharacterized protein LOC111446115 OS=Cucurbita moschata OX=3662 GN=LOC1114461...	[more]
A0A6J1J3B4	4.1e-81	59.12	uncharacterized protein LOC111480963 OS=Cucurbita maxima OX=3661 GN=LOC111480963...	[more]

BLAST of CaUC05G096970.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10650.1	4.6e-08	26.23	RING/U-box superfamily protein	[more]
AT5G10650.2	4.6e-08	26.23	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22937	E3 UBIQUITIN-PROTEIN LIGASE RNF165	coord: 219..345 coord: 119..176
None	No IPR available	PANTHER	PTHR22937:SF136	E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED	coord: 219..345 coord: 119..176

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC05G096970	CaUC05G096970	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28298873..28299260	exon
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28299362..28299501	exon
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28299600..28299766	exon
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28299836..28299910	exon
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28300223..28300270	exon
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28301442..28301563	exon
CaUC05G096970.1-exon	CaUC05G096970.1-exon-Ciama_Chr05:28301707..28301807	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28298873..28299260	CDS
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28299362..28299501	CDS
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28299600..28299766	CDS
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28299836..28299910	CDS
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28300223..28300270	CDS
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28301442..28301563	CDS
CaUC05G096970.1-cds	CaUC05G096970.1-cds-Ciama_Chr05:28301707..28301807	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC05G096970.1	CaUC05G096970.1-protein	polypeptide