CaUC01G024360.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G024360.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 36358667 .. 36361661 (+)
Sequence length336
RNA-Seq ExpressionCaUC01G024360.1
SyntenyCaUC01G024360.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTCTAAAAGCATTGACCAAACTCGTATTTTAAAGAAAAAAAACCATATTTTGGTTCATGAACTCTTAAATTCGTTATATTTTGGTTTCTCAATTTTCAACATATCCATCATAATTTTCAAACTTTAAAATTTGTAGGAGTTTATTTCTAAAACTTCTAATATGTTTATTTTAATTCATATGCCTAAAAAACATCAACTACGGTCTTATTTTTTAAATTTTATTTTAACAGATAAATAATATAGTTTTAAGTATATGTATTGATATGTTAACGAATATGATTTCAAGTTAAACAAACTAAAGGTGAATATTAGATAAAGTAGACTCAAGATAGAAAAGCAATATAACATAGATGAAAGTGGTTGTTTTTAAAAAAATTACGGATTAAAAGAGATATTTGAAACTTCAAAATCAAAGTATAATAAAGTTAAAAATTTTAAGGTGGATTTGGGGCAAGCAGCATTTAGTCTCATCAATGGGCCAATAGCCCAAAAGTCGGCTCAAACCCTGTCTAGGCTCAATTCAAACTTGATCCAAAGTCAACATTTAATTGACCCAGGGAGTCCAACTTGATCATGATATAGATTATCATTTTGATGATCAGGATAGCCCATGGGCCGACTCGTATGGGCCATATGGATTAGATCGTCGGATTAGGAATGAGCTTATCATTGAACCAACCCAAATATGTATGCATATACATAGTTTTTCATATATTATATTTTATATATTGAAAATGTAAAATTTTTAAAACTATTTAGATATAGTGTAGGTTTTAGTTAACATAATTGTTCAAAGTATTAAAAAGTAATAAAATTGTTTAATAAAATTAAACACTAAATAAAATTTTATACTGTCAATAATTTTACGTAGAAAGTTTAAAAAATATAAATACAAATTTAATAAAATTTAACAACATTCTATTAAAAAAATTTTAAAATATACATATATATTTATAAATAATTAAATAATCAATATTCAATAAGCCAACCAAATTTTTATCAAAAGAACCAAGCCTAAGGTTTGAACTAGTAGCTTGCTATTAAAGGTTGGAATGACCTAATCTAAGTCCAAACAATGCATTTGACCCTTGGGTTCAAGCCTTTACTCTGTGAATTTATGGAATCCACAAAACATAAAAGTGATACTTTTTAGTTGTGAACCAACAAATTCCTTCGGCCCATAAAAAACTGAAATTAACATCTTCAAATCTTTGGAGGACAAGAAGTAAAGGCAAGTTGGTCGCATGCTAACCGCATTGTAAATAAAACATAAATTTTATATTCTTTTAGTCATGGACCACAAACTTCTTATACCAAATATGTGTATAGTTTAGAACTAGTTTCACAACTCCAACTTCTTAGACACCTCTTAAATATTATAATAAACATTATAAAATTGTAGATACTATACTAAAATAAAATTTAAATTTTAGAATTAAAATGAAATTCAATAAATAAATAAATAAATCTGCACGATCTCCAACCCATTGTACAAAGTTGCCATTTCCAGTAGAACCCATCGATTGCATACGGTCGCAGCAGACGTAAAAAATTACAAAAATTAACATTGACCGTTCGATTGAAAATATCGTGCAGATATCGACGAAAGGTCATAACATCCAACGGCCAAGATCTCATCCTGGTGGATAACGTACTAAATGTGACAACACTCGAACGAAATAAATACCGAAAAAAAATACAGAGCGCGGTTGTTGCAAACCCTCGTAGTCCATATCTCCTACCATCGCAGTATCGGCGGCCTTCTGTCTGTGGTGGTGCCGCTACTTCGTTTCTTCTCCAAGGTACTTTCTTCCGTATGTTTTTCTTTTGCTCTCTGTGATATTCATGGTGGTTTTAGTTGTCTCTGTGAATTAGGGTTTTCTTTTTGCATCCCCTCACCCTAAGAATGCAAGTCTAGGAACGTTCTTATGGTTTGCAAATCGCAGTCGCTCTTTTACCAGTGTCTTTACCGCTACATGATTCATTGAACTATTTTGGTTCTGGTGGAAACCCTAATTTTTCTTTCAAAGTGGGAATGAGTTGAAATGCTCTCGAATAGGTTGTGGTTGTGACTCGGTCGAAGACTTTCACTTTTTCTGTAAGTTCCCATAAAACAAGGGTTTTCTTTTCCTCCTCAGTTTTTGTACTCGGTGCTTACATTCCATTACATTTTTCCTGTCCAATTAATCTATCGAGTTTCAAAGTGTCATAACTGTGCATATCTTTTTTTCTTTTTTTTTTTTTGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGTACGTTGCTTGAGGAACTAGACTGGTGATTAGGATCGAAGATGATGATTTTTTTATATTGATTTTTTTTTTCCATGTAATAAGAGGAAGAAAACTCGATTGAGTGTATTTCCAGCATATTGTTCATTTTATTTTTGCGGCTGCAGACAAATTGAAATTCTAA

mRNA sequence

ATGGCGATTCTAAAAGCATTGACCAAACTCAACCCATCGATTGCATACGGTCGCAGCAGACGTAAAAAATTACAAAAATTAACATTGACCGTTCGATTGAAAATATCGTGCAGATATCGACGAAAGGTCATAACATCCAACGGCCAAGATCTCATCCTGGTGGATAACGTACTAAATGTGACAACACTCGAACGAAATAAATACCGAAAAAAAATACAGAGCGCGGTTGTTGCAAACCCTCGTAGTCCATATCTCCTACCATCGCAGTATCGGCGGCCTTCTGTCTGTGGTGGTGCCGCTACTTCGTTTCTTCTCCAAGACAAATTGAAATTCTAA

Coding sequence (CDS)

ATGGCGATTCTAAAAGCATTGACCAAACTCAACCCATCGATTGCATACGGTCGCAGCAGACGTAAAAAATTACAAAAATTAACATTGACCGTTCGATTGAAAATATCGTGCAGATATCGACGAAAGGTCATAACATCCAACGGCCAAGATCTCATCCTGGTGGATAACGTACTAAATGTGACAACACTCGAACGAAATAAATACCGAAAAAAAATACAGAGCGCGGTTGTTGCAAACCCTCGTAGTCCATATCTCCTACCATCGCAGTATCGGCGGCCTTCTGTCTGTGGTGGTGCCGCTACTTCGTTTCTTCTCCAAGACAAATTGAAATTCTAA

Protein sequence

MAILKALTKLNPSIAYGRSRRKKLQKLTLTVRLKISCRYRRKVITSNGQDLILVDNVLNVTTLERNKYRKKIQSAVVANPRSPYLLPSQYRRPSVCGGAATSFLLQDKLKF
Homology
The following BLAST results are available for this feature:
BLAST of CaUC01G024360.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G024360.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G024360.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G024360.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC01G024360CaUC01G024360gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC01G024360.1-exonCaUC01G024360.1-exon-Ciama_Chr01:36358667..36358696exon
CaUC01G024360.1-exonCaUC01G024360.1-exon-Ciama_Chr01:36360187..36360475exon
CaUC01G024360.1-exonCaUC01G024360.1-exon-Ciama_Chr01:36361645..36361661exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC01G024360.1-cdsCaUC01G024360.1-cds-Ciama_Chr01:36358667..36358696CDS
CaUC01G024360.1-cdsCaUC01G024360.1-cds-Ciama_Chr01:36360187..36360475CDS
CaUC01G024360.1-cdsCaUC01G024360.1-cds-Ciama_Chr01:36361645..36361661CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC01G024360.1CaUC01G024360.1-proteinpolypeptide