CSPI07G15580.2 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G15580.2
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Chromatin modification-related protein MEAF6
Location	Chr7: 14197518 .. 14201924 (-)
Sequence length	926
RNA-Seq Expression	CSPI07G15580.2
Synteny	CSPI07G15580.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGTTGGATTTTAGTTTTCCTTCTTCTTCTCTATTCTAGGGTTTCACTCTCTTACACTATGAATTCATTATCATTCAGGTCAAAAGACGGCCACTAATCCCTCCGCCATGCTTGCTGGTCTTCTTTCCAGGAGGGCAAAACTCCAGGACGAGCTTCGGAATATTGAGAAACAGGTTTCTCTTTGTTTCCTTCTCAATAGTTTTTTTTTTTTTTTTTTTTAGATTTTCTCTACTTACTGATTTATGAATATGAACTTAATATACATTCTGTCTTTTCAATGGATTCTAAAGACAACACACGAATTTGGCTTCTTCCCCCAACATTTACTTTCTATGCAATGAGAATTCAGAAAGTAGTCTAGTAGCCACCTCTTCCTTCACGGCCATTTTGCTTATAAGGGTTGAATGTTCCTCCCCTACCCTTTTGATCTGGCTTGTTGCCTCCCAGAAAGCGTAGATGATAGTCTGTTCGAACTTTTGTCTAGATGACTGTGTAAAAGGTAAGCTAATATTTTGTGGAGAAATGCTATTAGAGCTCTCCTTTGGCATATTTGGAAAGAATGGAATACTAATATTCAGTCAAATTACTTAGATTCACAACCAAGCCCTACAGCTAGAGTAGACTACATTATGAGAATAATTGGCAAAGAAGGTTGATTGAGAACACTGTGGAGAGACATGATTCCTTGAAATATCCCATTCCTCACACCACTTAGAGGTTTACTCTTGAAATATCCTTTGGCATATCACGTACACTAAAGAGTTGTTTTCACTACATTAACCAGCAACAACCTAGCTTTACTTTTAAGCCTTAGCAGCGGGAGTCTATTCTCCCTTTATACTCTACCAAAAACCTTAAAAGGTCTTAAAAGCTTTCTCCCAACACGCCAGTGTAGAAAGTAATTCTCCTTTTCCTTTTAATTTTTAAACAAGAAACAGAGCCTGTTTGTTAGTATTTCTATCTGTGAAGTTACAACAAACTTATATCCTTTTTTCAGGAGAAATCTTACCCTATTGAAAAAAGCAAAAGAAATATAGACGAGAATGTCTTAATTGGCTTTACTTTCACAGTTCCATTTTCCATGTAACTATAGTACTTATATTCTGTAAAATCTGCAGGTTTACGACATGGAGACTAATTACCTACAAGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTGTATGGGGTGTCTATAAAATTATTTATCAGCAAAATTTCCTTTAAAGTTCTTTTGCTTCTTGTATGTTACTTGTCTTAGCACATGAAGGCTTATGCTTACTGAATTAATTAATTAACGGGATCAATAGAATATAATTCAGGGAAATTTACACTTCTTATCTAAGAAGCACATACACTTACACGCTGACACATTAATTTCCAGAAAAAGTAGGCCACGATATGTTGGGGACATGTTTTTGTTGTTTTTTCCCTTAAAAAGTAAATATATGTGTGCATATTTTTACATAGTGTGAAAAAGAAAAGACAAATTGAGGGAAAAAAATGAAGTTACTATGGACGAAGCTGCCGGATTGTCTGATTGTTGGTGGTTTTGGTTTTTGGGTTTTGTGGTAATAGAGAGGAAAGATATCAGAGGCTTAAACTTTTGAGGCTGGATGAGCAAGTGGCCAGTGGGTTTTGAGGATGGATAAGTCAGTGGGTGAGTTTGAAAACCCCTAAGATTTAAAGAAATATGGTTTGTACCTTAATGGGCTGAAGAAACCTGATGTAGTTTGGGATTAGTTATTAGCTGATTTGGTTCTCCTGTTTTCTGTCATTTGTATTAAGTATTTTATTTGTTAGTTTTCTAGTTACCGTGTGGTAACTCTTGTTTAATTTTCTGTTCGGTTGGCTTGTATTTAAAGCTAGTCTTCTTCACTAATGAAATTATGTTGTAATTTTCTTAAAGATTCTCTCTCTCACCAACTTGTCTAGACCAAACCGTTGCCTTTTCCTTTAAAAAATTCAGCAGTTGCACGTTCTTCACGTGTCGTAGTGGGTATCAGCGTGTCTGATGACATAATAATAGTAACAAAAATATTTAGACACGCTATTTTGCATGTTGGTGTCCAACACCAACACTTGGTCATCTTAGGAGTGACGTGCTTTATAGCTTTCGATCTATGACTATGAGGTGTTGATTTAATTTCTATTTAGCTCACAAGTTGTAAAGCGACACTTGTTTCTAAGAGGAGGTGCGGGTTGTGGTGCTCACTTAAGGCCCAGTATCTTTACAAAGTTTTTCTTTCCTTTTTTATTGTTAAAATTATTAAAAAGAATGAATGTTAGGTAAAGTTTCTAAAAATACTTTGTGGATGCAGTTTGAAGCGGTCTAGGAAGTTTCAGCTTGAGGATAGGCTCTTCTCATTGTCTTCAGTTACCTCCCCTGCTGTATGTACTTTGACTATTAACCCATGACTAAAGTGGAAATTTATGCTTTTCTCTATTATTCTTGTTGTACCATCTTTCTTTGTGAATTGACAGTTTCTCATGTAATGAGCAAGGAAGTTAAGATTCTCCTTGACAGCTGCACTTCACCATGTATCTTGTATTAAATGCTACAATCAAATCAAATGCTTACTACTTACATGACAAAGGAGTTGCTACTTGTTGCCATAGTTTCTCTCGAGAATACTTTTAGTTATGTCATACAGGAAATCATTTTCATGTTAAACAGTTGTAAACTAGTTTTTAATAGATTATATTTACAGAATACGAATTCATTTAGAGAGCTAAGACAAGGACATTCCATTTGGGGCTAATAAGATTTCTAGACTTGATGTTGGATCCGTCTTTTAGAAGTAACGCTGCTATAGAGGGAGAATGTAACTGATGAACCATTTGCCTTTTCATGTTTGTTTAGCAGAAATTCTTGGAATTTTGTTCCACAGTTGCATTCTAAAATTTTCTCTTGAAGGAATGGAACTTCTTTGTGATTATTTCTTTAAAGAAAAAGTTAAGGTTCTATGTAATTTATGTGGGTAAGGCAAAGGCTAGATTATGGCATATTTGATTAGACAGAAAGAAACTATATAGGATCTCTAGGGATTTTCTGAGGAGTGGAGAGGCTAATTATTTTGCATTTGCTAGACTAGATATATTTGTTCTCGTTCAGCTTCTTTGGACAATTAATTATAATTGTACTTGATGGTAATTGCTTCATACTGAGATGGGTTTTTTAATACTTGTGGAGACTGGGGTGATTGAATTTTGTGATTTTATGGGGTATGCGATTTGAAGCATTTTGTGTCTTCATGTAAACTTTCAAATTTTTAATGGATAGTTGTTTTTGGGTGTGTTCCTTTTTAACCTTGGGAAATTTCAGGCCTGTAATTTTTTAATTGTGTTATAAGCATGTAAACTAGACAAATAATTTCTATGGAAATTACATATGTTACAGAAAACATATTTCGATTTCCATCTTCTTGTCCTTCTCCTCTCTTCCTCAGCATAGTTTCTACTGTAGTTTTCTCTTGGTTTTCATATTTTCCTCTAACTTTCAGGCTGAAGAGCTTGCAGCTGGACGAGATGGTGAGCCGTAGCAGTAAGGATAGATACTTTTGTTTTGTTGTAATTAAAATTTTAGTCGTCTTTTATAAACCTTGTTGCAGATGGGAGATCCGACTTAGGTCCTGGCAGATCTAAAGGTGGAGCCATATATTCCAATGGACAGTTAGTATTCTGCCTGTCTTTTCCTTCGTTTGCTTTAAATTTCTCTTAACATAAACACCATTAAACAACTAATATCCACAGATACAAAAAAGAAAAAAAAAAACATATTTGTAACCTTTGAGCTCTTTTACTTTATAACATTGAGTTTTTTAAGGTATTTTAACTTTGGATAGTTTAGATGATAATTTATACATTGCATATGCAGAGGAAAACCAAAAAAGGGAAGACCAGCTCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTACGATGATGATCCGGACTTGACATTGTGAATGCTGTTAATGGATCCTCTGATGGCGTCTTTGTCATCTACAGAGTTGAAAGATGAGTCCCCTAAATCCTTCAAGTAGTCAACCTATGTTCACCAAGGCTAACGTAGGGAAGTATATCCTATTTATATATGTGCTTGGCCATGCTTGTCCTCGGATTGTTTTATATTATAAATGAAGAGGATAGGATTCGAATCTATGATGGATGGAGAGAATTAGTAATGTTTAACCATTGGAGCTATGTCATGATTGTTATGGACTCGTGAAAGTGTATTTATTAGTAAATTTCTTGTCAGGGAGGTTATCTTGATCCCCTCTTTTTGTATTTGCTCCTTTGGATTAATACATCCTCTTTCTTAAAGAACGCATGAAGAAAATTTTGTGGCACG

mRNA sequence

GTTGTTGGATTTTAGTTTTCCTTCTTCTTCTCTATTCTAGGGTTTCACTCTCTTACACTATGAATTCATTATCATTCAGGTCAAAAGACGGCCACTAATCCCTCCGCCATGCTTGCTGGTCTTCTTTCCAGGAGGGCAAAACTCCAGGACGAGCTTCGGAATATTGAGAAACAGGTTTACGACATGGAGACTAATTACCTACAAGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTTTTGAAGCGGTCTAGGAAGTTTCAGCTTGAGGATAGGCTCTTCTCATTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAGCTTGCAGCTGGACGAGATGATGGGAGATCCGACTTAGGTCCTGGCAGATCTAAAGGTGGAGCCATATATTCCAATGGACAAGGAAAACCAAAAAAGGGAAGACCAGCTCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTACGATGATGATCCGGACTTGACATTGTGAATGCTGTTAATGGATCCTCTGATGGCGTCTTTGTCATCTACAGAGTTGAAAGATGAGTCCCCTAAATCCTTCAAGTAGTCAACCTATGTTCACCAAGGCTAACGTAGGGAAGTATATCCTATTTATATATGTGCTTGGCCATGCTTGTCCTCGGATTGTTTTATATTATAAATGAAGAGGATAGGATTCGAATCTATGATGGATGGAGAGAATTAGTAATGTTTAACCATTGGAGCTATGTCATGATTGTTATGGACTCGTGAAAGTGTATTTATTAGTAAATTTCTTGTCAGGGAGGTTATCTTGATCCCCTCTTTTTGTATTTGCTCCTTTGGATTAATACATCCTCTTTCTTAAAGAACGCATGAAGAAAATTTTGTGGCACG

Coding sequence (CDS)

ATGCTTGCTGGTCTTCTTTCCAGGAGGGCAAAACTCCAGGACGAGCTTCGGAATATTGAGAAACAGGTTTACGACATGGAGACTAATTACCTACAAGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTTTTGAAGCGGTCTAGGAAGTTTCAGCTTGAGGATAGGCTCTTCTCATTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAGCTTGCAGCTGGACGAGATGATGGGAGATCCGACTTAGGTCCTGGCAGATCTAAAGGTGGAGCCATATATTCCAATGGACAAGGAAAACCAAAAAAGGGAAGACCAGCTCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTACGATGATGATCCGGACTTGACATTGTGA

Protein sequence

MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPRDAKRMRHSSEQDFDYDDDPDLTL*

Homology

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy Swiss-Prot
Match: Q5ZIX3 (Chromatin modification-related protein MEAF6 OS=Gallus gallus OX=9031 GN=MEAF6 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-11
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 2   LAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 61
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 21  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 80

Query: 62  SRKFQLEDRLFSLSSVTSPAAEELAAGRDD 90
           +RKF+  +RLFS SSVTS AA    AG  D
Sbjct: 81  NRKFKEAERLFSKSSVTSAAAVSALAGVQD 110

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy Swiss-Prot
Match: Q68ER9 (Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis OX=8364 GN=meaf6 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-11
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 2   LAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 61
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 62  SRKFQLEDRLFSLSSVTSPAAEELAAGRDD 90
           +RKF+  +RLFS SSVTS AA    AG  D
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD 108

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy Swiss-Prot
Match: Q52KD8 (Chromatin modification-related protein MEAF6 OS=Xenopus laevis OX=8355 GN=meaf6 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.9e-11
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 2   LAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 61
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 62  SRKFQLEDRLFSLSSVTSPAAEELAAGRDD 90
           +RKF+  +RLFS SSVTS AA    AG  D
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSSLAGVQD 108

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy Swiss-Prot
Match: Q58CU0 (Chromatin modification-related protein MEAF6 OS=Bos taurus OX=9913 GN=MEAF6 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 2   LAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 61
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 62  SRKFQLEDRLFSLSSVTSPAAEELAAGRDD---GRSDLGPG-RSKGGAIYSNGQGKPKKG 121
           +RKF+  +RLFS SSVTS AA    AG  D    + + G G  S     + N + +P + 
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQE 138

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy Swiss-Prot
Match: Q9HAF1 (Chromatin modification-related protein MEAF6 OS=Homo sapiens OX=9606 GN=MEAF6 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 2   LAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 61
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 62  SRKFQLEDRLFSLSSVTSPAAEELAAGRDD---GRSDLGPG-RSKGGAIYSNGQGKPKKG 121
           +RKF+  +RLFS SSVTS AA    AG  D    + + G G  S     + N + +P + 
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPSQE 138

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy TrEMBL
Match: A0A5D3CCW4 (Chromatin modification-related protein MEAF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00580 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 15  MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 74

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR
Sbjct: 75  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 134

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 135 DAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy TrEMBL
Match: A0A0A0K8N8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375790 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 15  MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 74

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR
Sbjct: 75  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 134

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 135 DAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy TrEMBL
Match: A0A6J1CR40 (chromatin modification-related protein MEAF6 OS=Momordica charantia OX=3673 GN=LOC111013461 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.7e-69
Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLL+RRAKL DELRNIEKQVYDMETNYL DPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 63  MLAGLLTRRAKLHDELRNIEKQVYDMETNYLHDPSQCGNVLKGFEGFLSASKSTALLKRS 122

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRP PR
Sbjct: 123 RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTPR 182

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 183 DAKRMRHSSEQDFDYDDDPDLTL 205

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy TrEMBL
Match: A0A6J1H5H2 (chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460674 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.8e-68
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLL+RRAKL DELR IEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKS+ALLKRS
Sbjct: 15  MLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALLKRS 74

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRP PR
Sbjct: 75  RKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTPR 134

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 135 DAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CSPI07G15580.2 vs. ExPASy TrEMBL
Match: A0A6J1KUD2 (chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497707 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLL+RRAKL DELR IEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASK++ALLKRS
Sbjct: 15  MLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKNSALLKRS 74

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRP PR
Sbjct: 75  RKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTPR 134

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 135 DAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CSPI07G15580.2 vs. NCBI nr
Match: XP_011659255.1 (chromatin modification-related protein MEAF6 [Cucumis sativus] >KGN44737.1 hypothetical protein Csa_015601 [Cucumis sativus] >TYK08169.1 chromatin modification-related protein MEAF6 [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 4.3e-71
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 15  MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 74

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR
Sbjct: 75  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 134

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 135 DAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CSPI07G15580.2 vs. NCBI nr
Match: XP_038898405.1 (chromatin modification-related protein MEAF6 isoform X4 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.6e-70
Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           ML GLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 15  MLTGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 74

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRPAPR
Sbjct: 75  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPAPR 134

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 135 DAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CSPI07G15580.2 vs. NCBI nr
Match: XP_038898404.1 (chromatin modification-related protein MEAF6 isoform X3 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.6e-70
Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           ML GLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 16  MLTGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 75

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRPAPR
Sbjct: 76  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPAPR 135

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 136 DAKRMRHSSEQDFDYDDDPDLTL 158

[Close]

BLAST of CSPI07G15580.2 vs. NCBI nr
Match: XP_022143603.1 (chromatin modification-related protein MEAF6 [Momordica charantia])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           MLAGLL+RRAKL DELRNIEKQVYDMETNYL DPSQCGNVLKGFEGFLSASKSTALLKRS
Sbjct: 63  MLAGLLTRRAKLHDELRNIEKQVYDMETNYLHDPSQCGNVLKGFEGFLSASKSTALLKRS 122

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRPAPR 120
           RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRP PR
Sbjct: 123 RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTPR 182

Query: 121 DAKRMRHSSEQDFDYDDDPDLTL 144
           DAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 183 DAKRMRHSSEQDFDYDDDPDLTL 205

[Close]

BLAST of CSPI07G15580.2 vs. NCBI nr
Match: XP_038898402.1 (chromatin modification-related protein eaf6 isoform X1 [Benincasa hispida])

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 141/146 (96.58%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTAL---L 60
           ML GLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTAL   L
Sbjct: 16  MLTGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALYGVL 75

Query: 61  KRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRP 120
           KRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYSNGQGKPKKGRP
Sbjct: 76  KRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRP 135

Query: 121 APRDAKRMRHSSEQDFDYDDDPDLTL 144
           APRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 136 APRDAKRMRHSSEQDFDYDDDPDLTL 161

[Close]

BLAST of CSPI07G15580.2 vs. TAIR 10
Match: AT4G14385.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 3.7e-44
Identity = 96/146 (65.75%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           ML  LL++R KL+ ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+SKSTA  KRS
Sbjct: 14  MLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSSSKSTASAKRS 73

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYSNGQGKPKKGRP--- 120
           RKFQ EDR+FSLSSVTSPAAEEL  GR+DGR++LGPGRSKGG    + QGKPKKGR    
Sbjct: 74  RKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGGL---STQGKPKKGRGQSI 133

Query: 121 APRDAKRMRHSSEQDFDYDDDPDLTL 144
             R+AKR R S+E D++ +DDPD+ +
Sbjct: 134 IAREAKRSRPSTEPDYEDEDDPDMNM 156

[Close]

BLAST of CSPI07G15580.2 vs. TAIR 10
Match: AT4G14385.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-36
Identity = 76/102 (74.51%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
           ML  LL++R KL+ ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+SKSTA  KRS
Sbjct: 14  MLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSSSKSTASAKRS 73

Query: 61  RKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG 103
           RKFQ EDR+FSLSSVTSPAAEEL  GR+DGR++LGPGRSKGG
Sbjct: 74  RKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG 115

[Close]

BLAST of CSPI07G15580.2 vs. TAIR 10
Match: AT4G14385.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1  MLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRS 60
          ML  LL++R KL+ ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+SKSTA  KRS
Sbjct: 14 MLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSSSKSTASAKRS 73

Query: 61 RKFQLEDRLFSLSSVTSPA 80
          RKFQ EDR+FSLSSVTSPA
Sbjct: 74 RKFQPEDRVFSLSSVTSPA 92

The following BLAST results are available for this feature:

BLAST of CSPI07G15580.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZIX3	6.8e-11	41.11	Chromatin modification-related protein MEAF6 OS=Gallus gallus OX=9031 GN=MEAF6 P...	[more]
Q68ER9	6.8e-11	41.11	Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis OX=8364 GN=me...	[more]
Q52KD8	8.9e-11	41.11	Chromatin modification-related protein MEAF6 OS=Xenopus laevis OX=8355 GN=meaf6 ...	[more]
Q58CU0	2.2e-09	34.92	Chromatin modification-related protein MEAF6 OS=Bos taurus OX=9913 GN=MEAF6 PE=2...	[more]
Q9HAF1	2.2e-09	34.92	Chromatin modification-related protein MEAF6 OS=Homo sapiens OX=9606 GN=MEAF6 PE...	[more]

BLAST of CSPI07G15580.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCW4	2.1e-71	100.00	Chromatin modification-related protein MEAF6 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0K8N8	2.1e-71	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375790 PE=3 SV=1	[more]
A0A6J1CR40	5.7e-69	96.50	chromatin modification-related protein MEAF6 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1H5H2	4.8e-68	95.10	chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita moscha...	[more]
A0A6J1KUD2	1.1e-67	94.41	chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita maxima...	[more]

BLAST of CSPI07G15580.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659255.1	4.3e-71	100.00	chromatin modification-related protein MEAF6 [Cucumis sativus] >KGN44737.1 hypot...	[more]
XP_038898405.1	3.6e-70	98.60	chromatin modification-related protein MEAF6 isoform X4 [Benincasa hispida]	[more]
XP_038898404.1	3.6e-70	98.60	chromatin modification-related protein MEAF6 isoform X3 [Benincasa hispida]	[more]
XP_022143603.1	1.2e-68	96.50	chromatin modification-related protein MEAF6 [Momordica charantia]	[more]
XP_038898402.1	1.5e-68	96.58	chromatin modification-related protein eaf6 isoform X1 [Benincasa hispida]	[more]

BLAST of CSPI07G15580.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14385.1	3.7e-44	65.75	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G14385.2	3.7e-36	74.51	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G14385.3	1.0e-25	73.42	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..143
None	No IPR available	PANTHER	PTHR13476:SF2	CHROMATIN MODIFICATION MEAF6-LIKE PROTEIN	coord: 1..143
IPR015418	Chromatin modification-related protein Eaf6	PFAM	PF09340	NuA4	coord: 2..78 e-value: 4.2E-25 score: 87.4
IPR015418	Chromatin modification-related protein Eaf6	PANTHER	PTHR13476	UNCHARACTERIZED	coord: 1..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G15580	CSPI07G15580	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G15580.2.utr3p1	CSPI07G15580.2.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G15580.2.cds6	CSPI07G15580.2.cds6	CDS
CSPI07G15580.2.cds5	CSPI07G15580.2.cds5	CDS
CSPI07G15580.2.cds4	CSPI07G15580.2.cds4	CDS
CSPI07G15580.2.cds3	CSPI07G15580.2.cds3	CDS
CSPI07G15580.2.cds2	CSPI07G15580.2.cds2	CDS
CSPI07G15580.2.cds1	CSPI07G15580.2.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G15580.2.utr5p1	CSPI07G15580.2.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G15580.2	CSPI07G15580.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006325	chromatin organization
biological_process	GO:0043968	histone H2A acetylation
biological_process	GO:0044154	histone H3-K14 acetylation
biological_process	GO:0043983	histone H4-K12 acetylation
biological_process	GO:0043981	histone H4-K5 acetylation
biological_process	GO:0043982	histone H4-K8 acetylation
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0070776	MOZ/MORF histone acetyltransferase complex
cellular_component	GO:1990467	NuA3a histone acetyltransferase complex
cellular_component	GO:1990468	NuA3b histone acetyltransferase complex
cellular_component	GO:0035267	NuA4 histone acetyltransferase complex
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding