CSPI07G09790.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G09790.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein translation factor SUI1 homolog
Location	Chr7: 7759819 .. 7761408 (-)
Sequence length	1034
RNA-Seq Expression	CSPI07G09790.1
Synteny	CSPI07G09790.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTTCCTTTTCCTCTTCCTTTTCTAAGATAAAATGATTTTCTTTTCCAATTCCAATCTCAACCATCCATTACTAATCTACATCCTCCACGTCATCCTCCCAGAACATTCCAGCTCAATCCAACCAAATTTTATATTGAATTCTTTGTTACCGCCTTCCCCCCACCAACACCTCTCTATAAGTACCCCTCGTTTGCCTTCCCTCTTCTTCCATCCTTCCTTCTTTCTTTCCTCACTCCTTTCATCCGTCTCTCTCGCCTTCTGGTAACTTTCTCTTTCTTTCATTACTTGTTTTTACCCTTTTCTTTTCTGGGTTCTTTTCATGTCCCTCCTTCTGCTTAATCCTTCATACGCTTTTCTTTTATAATCAAATCTCTGATATGATCTTATGAATTTAATGGAAATCTTTGTTTTTTGTTTCTTCTTTTCTCTCTCTTTTCTTTTTTCTTTTAGATCTTGTGGTATTTGTTCTGATCATTTGCTAATTCTGGTGTTGGCTTATTCAATGAAGAGCCGCTGCCGAATTCGGAAATCTTTTATTCTTCCTTTTTAATTGTGATTATCATTAATTGTTTGCTTCTTTTGGTTACGAAGATCTGAATCCCGTCTGAGTTCGGTAACGAGTTTTAAGTGTTCGTGAGAAAACAATCATGTATTTAGAAGCACAGAACATTGAACATTAAACATTAAACAAACGGATCTAATATCCAACAAGGGTCTTTGCTTTTGCTTTTAAATTCTAGTATTTCTTGTATCTTAAGGTCTATGGATAGTGAAGGGTTTAGGTTTCCAACAATAATTATTGTTACTATGCTTTCAGATTCCCGGTTGTTCGGGTTCGAGTAAGTTTCCATTCAAACAAGGTTCATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAAGCAACCTTCTGTTTGATGTTTTATCTTATGCTGTTGAATTGGGAGTACTGAACGAGTCTTTGTATGTTTTTTTCTTTCGTCGTTATCTTTTTCTTTTTCGATGGATCGTATGTGGGTGTGTGAAGATGGGAACTTACTATCAATGAAGCGTTTGATTTTGAGTATTTGCCTTGAAATTTCTGGTTTTTCATTCACCCCTTCCAACAACGTGGATAGGTCGGATTGAAAGTTTAGTTATAGTTAACCATAACCATTTCTAGTCCTCGTAGGAATAAAAAGAGGAGCCTTCTGTGGAAAATCTTCAACTTTTTTTCTTTTTTCTTGGGAACCTAAATGTATTATAATTTAATATATCTATACACTGTGTTACTTGTCAGTCAAGC

mRNA sequence

TCCTCTTCCTTTTCCTCTTCCTTTTCTAAGATAAAATGATTTTCTTTTCCAATTCCAATCTCAACCATCCATTACTAATCTACATCCTCCACGTCATCCTCCCAGAACATTCCAGCTCAATCCAACCAAATTTTATATTGAATTCTTTGTTACCGCCTTCCCCCCACCAACACCTCTCTATAAGTACCCCTCGTTTGCCTTCCCTCTTCTTCCATCCTTCCTTCTTTCTTTCCTCACTCCTTTCATCCGTCTCTCTCGCCTTCTGATTCCCGGTTGTTCGGGTTCGAGTAAGTTTCCATTCAAACAAGGTTCATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAAGCAACCTTCTGTTTGATGTTTTATCTTATGCTGTTGAATTGGGAGTACTGAACGAGTCTTTGTATGTTTTTTTCTTTCGTCGTTATCTTTTTCTTTTTCGATGGATCGTATGTGGGTGTGTGAAGATGGGAACTTACTATCAATGAAGCGTTTGATTTTGAGTATTTGCCTTGAAATTTCTGGTTTTTCATTCACCCCTTCCAACAACGTGGATAGGTCGGATTGAAAGTTTAGTTATAGTTAACCATAACCATTTCTAGTCCTCGTAGGAATAAAAAGAGGAGCCTTCTGTGGAAAATCTTCAACTTTTTTTCTTTTTTCTTGGGAACCTAAATGTATTATAATTTAATATATCTATACACTGTGTTACTTGTCAGTCAAGC

Coding sequence (CDS)

ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA

Protein sequence

MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF*

Homology

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BLAST of CSPI07G09790.1 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-46
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of CSPI07G09790.1 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.1e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

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BLAST of CSPI07G09790.1 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.7e-46
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of CSPI07G09790.1 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-45
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of CSPI07G09790.1 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-45
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of CSPI07G09790.1 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

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BLAST of CSPI07G09790.1 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI07G09790.1 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. ExPASy TrEMBL
Match: A0A6J1IJY4 (protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111476953 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.6e-56
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. ExPASy TrEMBL
Match: A0A6J1FCX8 (protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC111442862 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI07G09790.1 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of CSPI07G09790.1 vs. NCBI nr
Match: XP_022976609.1 (protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima] >KAG6592045.1 Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. NCBI nr
Match: XP_023536045.1 (protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFAD+KDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. NCBI nr
Match: XP_022936190.1 (protein translation factor SUI1 homolog 1 [Cucurbita moschata])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-52
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-52
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790.1 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-47
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790.1 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-47
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790.1 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-47
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of CSPI07G09790.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41568	1.8e-46	81.42	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SQF4	5.1e-46	80.53	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
Q94JV4	6.7e-46	79.65	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P56330	7.4e-45	75.65	Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1	[more]
A6MZM2	7.4e-45	75.65	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of CSPI07G09790.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHR8	1.1e-56	100.00	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K771	1.1e-56	100.00	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 S...	[more]
A0A1S3BI45	1.1e-56	100.00	protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1IJY4	5.6e-56	99.11	protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FCX8	1.3e-55	98.21	protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CSPI07G09790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139787.1	2.3e-56	100.00	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]
KAA0025154.1	2.3e-56	100.00	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]
XP_022976609.1	1.2e-55	99.11	protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 pro...	[more]
XP_023536045.1	2.6e-55	98.21	protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022936190.1	2.6e-55	98.21	protein translation factor SUI1 homolog 1 [Cucurbita moschata]	[more]

BLAST of CSPI07G09790.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	1.3e-52	85.71	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	1.3e-52	85.71	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	1.2e-47	81.42	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	1.6e-47	81.42	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	1.6e-47	81.42	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.780.10		coord: 2..112 e-value: 1.5E-45 score: 156.5
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 7..112 e-value: 1.2E-52 score: 175.0
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 e-value: 2.6E-47 score: 157.7
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 28..111 e-value: 1.9427E-47 score: 144.985
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 27..101 e-value: 3.4E-24 score: 85.1
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 30..100 score: 22.770058
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 4..112

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G09790	CSPI07G09790	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G09790.1.utr3p1	CSPI07G09790.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G09790.1.cds2	CSPI07G09790.1.cds2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G09790.1.utr5p2	CSPI07G09790.1.utr5p2	five_prime_UTR
CSPI07G09790.1.utr5p1	CSPI07G09790.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G09790.1	CSPI07G09790.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity