CSPI07G09460.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G09460.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Vesicle transport protein
Location	Chr7: 7472802 .. 7476591 (-)
Sequence length	972
RNA-Seq Expression	CSPI07G09460.1
Synteny	CSPI07G09460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGCTTTGGCCTTCGTGCTTGAGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAATTTCCAATCTGCAACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATTTTCATTGCGTTTACAATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTTACTCTTGGATGTTGCTTCATAATTGGATCGTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGGTATGCTTGATATTTCTTTTATTACATTTCTATCAAAACCCTGTCGATATTTTAGCTGATTCTCTTCTGTTATTTGTTCCTTTATTTTATGATGCAGAGACTTCCTTTTACAGTGATCTTTATTGGTAGTATGTTGGGCACCTTATATGTTTCCATGGGCCTCCACAGCTATATCCTTTCAGTTTTCTTCTCTGTATTACAGGTATTTAAACAAAATACTTTATCTTTATTCGTTATTGTGCAAACTTTTATTCCCATCATCCAGTTAGTATCTGTCTACTTCATATTAGTGATGTAATTAATTTAGTTAGTTTTCTTAATTGTTAAGGTTTAGTTTCCTAATTGTCTCAGTTAAAGGTTTAGTTTCCTTTTCAGTTTCATAATTGTCTTGTTTAATTTCCTTTTCAGTTTCTTAATTGTCTTAGTTAAAGATTTAGTTTCCCTTTTAGTTTTAGGTTTGTAACATATGGAATTAGGCTATAAAAAGGCCTCTTCTCCATCCTTTTCCATTGATTCAATAATTGAAGTAATTTTTAAAAGAAACAAATTTACCAAGATTTAAAGCATTAGTTTTGGGTCCTTAAACTTTAAAAAGTATCTAATAGGTCTTTGCACTTTTAATTTAGTATTTAAAAGTTACAATTTCCTGAGCTTTGAAATTGTAGATTACATCTCCAACATTTTGAAAATTTTAAAATGTTGCTAATATTAGGTATAAAGTTGAATTTTATGTCTAATAAGACCTTAAACTTTTTTGAATAAGAAACATTTCACTAATGAACGAAATGTTCGAAAGCATAACCGAAAGCCATATATTACAGGGAATACAAAAGATTTGTCCAATTTGCAGCAAGAAAACTTAAATTGTGATCTTTAAGATGCTGCAACTGTTTTCACCAATAAAGAGCATTGAAAATGGGCTTCTATGATAATAATCCCTAAGCTTTCAGTATAGTGTCTAGTTGGTCCATGAATTTAATAAATGTCAAGTAGGTCAAGGGCCTATTTTTACTTTTGAAAAGAAAACATTTTCATTTATTGGTATAAAATAAGGCAAAAGCTAATAGTACAAGAGGATTATACAATGAGCAAAAGCAAAAACAGAAAAAAAAAAAAGGATTAGGAGGTGCACTCAAGCATCTCAACTAGGTTGACACCCCCTTAGCATCCTTATCACACCCAACAAAATAAATAGAGTTCAAGTGGGGGCTACACACAGCCAATACAAACCAATAAGAAACATTCAAATAAATCTAACAATTCTAGGAATAGACTGGCAAAAAGGAGCTGCCAAAAGGAGAATCATCAGAGGGTGTTGCCCAAATCTGGATCTTCAATCAAGGAGGAAGGATGAAGGCCTGCCAATTTTAGATGTCTTGCATTGAGGCGTTGAACCGTTTGCTTAGAGAGCACCACGAGGAGGCATTCAGCCGTGCCAACTCATACCTGTCCTGCCAATAGGGAGATTTATTTTGAAAGACCCGTTGGTTTCTCTCGAACCATATTTCTGCCAAGATTGCCTTGATAGCATTGCACCAAAGCAAGGATGCAATTTTCCTTGTAAGTGGCTGTCTAACATTATTCTTGGAGTCTTTATCAAGGGACCAGCTGAGATTAAAGGTGTGAAGGGCCTATTAGATATAAAATTGAAATATCAAGTACCCATTAGACAGAAAATTGAATGTTTAAGAACCTATTAGACATTTTAGAGCCTAATTCCTATTCATGGTTTTGATTCCATGGAGATTAGACTTGTCTCCTATCTATACATTTTCATGTTTTTTAATTCCAACGGAAATTCTGAAATTAGTTTGAGTAGCGTGGACCTTAAACTTTTTATGGAATATGTATAGAAGGGAGACCAGTCCAATCTCCATCTGAATCGACCATGAAAGAGTGTTTCAAAGATCCTTATGTTGTGGACTCTTTTGCAGGAGTTATTTAAGGATGTCCAAGATAATTTCACTGTGGCTTCTCAACTTTTATTGCTGAGATATAGAAGATGTGCACATCCGAAAAAAACATCCGAAAAAAAAATCAGATACTTTCAAATTATGTATCGGTCATGTTTCAGCCACGTATTTGAATCTATTCCTATAGATATGTATCTAACATTCATTCACTGCTTAGTTTAAAGTATTTGTGATTCATAGATGTGATGATGTGATCTAAGGCCTTGTTATCTTAGTAGCATAGGCAGCATAGCGAGGGGCCGAGAGTCTAGTAGGCAGCTTTTCTTTGCATCTTATCAACAGTGTTCAAGCTTATATAGGTGGACTAAAAGAATTTCAGCTTTTCTGGGACTTAAATCTGTCAGATGTAGTCCACGAGAGGGCTTCAACTTTGCCTCAGGTGTTTTAGTATAGTGAACGAGGGCTGATTCTGCTGGGAAACCATCCGAAGCCTCTAGCTTTCAATAAATTTGTGTCGTGGACATGAGGACTACATTGCCTCAGGTGTTTTAGTGTTCAAGCTTCCTAATTTGAACAGCATCCACCTTCGCTGTTTAATTTCATAACCTCTTTCGAATGATTCTCTTCTTAGTTGACATCATCCCAACAATCAATCAGCTAGCTTTTCTTTTTTAATCTTTTTTGGAGTTGGTGCATTAGAACTTCAGGAAGAGAATACTGTTTGATCACATAATTCTACATGATATGCACGCCTATCTTAACCAATAGTATATTGATAGGAATGCTATAAGGGTATTAAGAGTATATTAGCAATCAGCTAGGAGTTGTTATGTTTGCTGGTTATAAATGGAGTCAGTGGATTAGGATTTGAGAGTCCGTCCTCTCAAGAAGGGAGAGTTTAAGAATGTCTTGTAGTTCTAATATTTATATATTTCATCCATTTCCGATTTCCCGTTTCTTTATCATACATGACACAATTGGTCCAAATTGAAACGTTGAGGTTTCTCCAGGTTCTTGCACTTGCATACTATGCTGTTTCATATTTTCCTGGAGGTTCTACTGGGATGAAGTTTCTGTCATCTGCTCTTACGTCTTCTGTAACGAAATGTTTCGGCAGGTGATCTCAACTCCAGTGTGGTGTTCAGTTGGTGTACTGCACATTTCTCTCCTAACTAGAGATCTATGTTAAAGTTCGTAAAGTTTTGGAATTTGCTGAATGTACAAACCAAAAGTATTAGTAACAGGCACCATTTTTCTGTATTCCTATTTGGTTGTTTCATCCCCATCATCACATTGACTGAGCTATTTTGCAACTGTAGAGAGAGGTCAATTAATGGGGACAAAGTTGTGAAGGCTTTGGGGCATTAATGTTGCTATTTTCTACCAATGCCATCACAATTTGAAGGCAATAGAGAATGAAATTAGATTACTTTTTTTTTTTTTTTCAAAAATTAGATTACTTAATCCAGCTCTTGCGTTAAAAGGCTACCACGCTCTCATTATATGACCGTTCTATATGCATTGAAGTCTAATGTATTGTTTTTTAATGGAGTATCGAATCATTTCCCTTTACGGTG

mRNA sequence

ATGTATGCTTTGGCCTTCGTGCTTGAGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAATTTCCAATCTGCAACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATTTTCATTGCGTTTACAATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTTACTCTTGGATGTTGCTTCATAATTGGATCGTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGAGACTTCCTTTTACAGTGATCTTTATTGGTAGTATGTTGGGCACCTTATATGTTTCCATGGGCCTCCACAGCTATATCCTTTCAGTTTTCTTCTCTGTATTACAGGTTCTTGCACTTGCATACTATGCTGTTTCATATTTTCCTGGAGGTTCTACTGGGATGAAGTTTCTGTCATCTGCTCTTACGTCTTCTGTAACGAAATGTTTCGGCAGGTGATCTCAACTCCAGTGTGGTGTTCAGTTGGTGTACTGCACATTTCTCTCCTAACTAGAGATCTATGTTAAAGTTCGTAAAGTTTTGGAATTTGCTGAATGTACAAACCAAAAGTATTAGTAACAGGCACCATTTTTCTGTATTCCTATTTGGTTGTTTCATCCCCATCATCACATTGACTGAGCTATTTTGCAACTGTAGAGAGAGGTCAATTAATGGGGACAAAGTTGTGAAGGCTTTGGGGCATTAATGTTGCTATTTTCTACCAATGCCATCACAATTTGAAGGCAATAGAGAATGAAATTAGATTACTTTTTTTTTTTTTTTCAAAAATTAGATTACTTAATCCAGCTCTTGCGTTAAAAGGCTACCACGCTCTCATTATATGACCGTTCTATATGCATTGAAGTCTAATGTATTGTTTTTTAATGGAGTATCGAATCATTTCCCTTTACGGTG

Coding sequence (CDS)

ATGTATGCTTTGGCCTTCGTGCTTGAGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAATTTCCAATCTGCAACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATTTTCATTGCGTTTACAATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTTACTCTTGGATGTTGCTTCATAATTGGATCGTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGAGACTTCCTTTTACAGTGATCTTTATTGGTAGTATGTTGGGCACCTTATATGTTTCCATGGGCCTCCACAGCTATATCCTTTCAGTTTTCTTCTCTGTATTACAGGTTCTTGCACTTGCATACTATGCTGTTTCATATTTTCCTGGAGGTTCTACTGGGATGAAGTTTCTGTCATCTGCTCTTACGTCTTCTGTAACGAAATGTTTCGGCAGGTGA

Protein sequence

MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR*

Homology

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy Swiss-Prot
Match: P38166 (Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SFT2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13
Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 36  LMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAH 95
           ++ F  FL  G    F   T   PV+   P+KF + +T+G    + +F  L GP   L H
Sbjct: 81  MVLFVCFL-LGATACFTLCTFLFPVLAAKPRKFGLLWTMGSLLFVLAFGVLMGPLAYLKH 140

Query: 96  MFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMK 155
           + ++ERLPF++ F  +   T+Y +    + +L++  ++L+++A+ YYA+SYFP G+TG++
Sbjct: 141 LTARERLPFSMFFFATCFMTIYFAAFSKNTVLTITCALLELVAVIYYAISYFPFGATGLR 200

Query: 156 FLSSALTSS 165
            LSSA  +S
Sbjct: 201 MLSSAGVNS 208

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy Swiss-Prot
Match: Q9P6K1 (Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sft2 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.0e-10
Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 0


Query: 13  SKGVRELPGN-------FQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMP 72
           S    E+P N       FQS+  ++   +  M FG+ L   +    IA  MF PV+VL P
Sbjct: 38  SNDYTEIPTNASGGNSYFQSSEFSLSRWERYMLFGICLLGSLACYAIACFMF-PVLVLKP 97

Query: 73  QKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSY 132
           +KF + +T+G    +  F  ++G       + + ERLP T+ +  ++L T+  ++ + S 
Sbjct: 98  RKFVLLWTMGSLLAVLGFAIVQGFVAHFRQLTTMERLPITLSYFVTLLATIIATIKIKST 157

Query: 133 ILSVFFSVLQVLALAYYAVSYFPGG----STGMKFLSSALTS 164
           ILS+ F VL +L+   Y +++FP G    S G +  S +L++
Sbjct: 158 ILSIVFGVLHILSFVAYLIAFFPFGTRTVSLGTRMASRSLSN 198

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy Swiss-Prot
Match: Q8WV19 (Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.7e-05
Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 28  SNVPSGKALMYFGLFLATGVFFIFIAF-TMFLPVMVLMPQKFAICFTLGCCFIIGSFFAL 87
           S++     L +F +    GVFF  +    ++LP  + +   FA+ +TLG    + S   L
Sbjct: 26  SSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKL---FAVFYTLGNLAALASTCFL 85

Query: 88  KGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSY 147
            GP  QL  MF   RL  T++ +   + TL  ++  H   L+V F +LQ L++ +Y++SY
Sbjct: 86  MGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSY 144

Query: 148 FP 149
            P
Sbjct: 146 IP 144

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy Swiss-Prot
Match: O95562 (Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-04
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 48  FFIFIAFTMFLPVMVLMPQK----FAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLP 107
           F I I  ++   V++ +P+K    FA+ +T G    IGS   L GP  QL  MF   RL 
Sbjct: 41  FAIGILCSLLGTVLLWVPRKGLHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLI 100

Query: 108 FTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMK 156
            T++ +     TL  +   H+  L++ F +LQ LAL +Y++S+ P     +K
Sbjct: 101 ATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTWYSLSFIPFARDAVK 152

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy Swiss-Prot
Match: Q5SSN7 (Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.3e-04
Identity = 37/122 (30.33%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 28  SNVPSGKALMYFGLFLATGVFFIFIAF-TMFLPVMVLMPQKFAICFTLGCCFIIGSFFAL 87
           S++     L +F +    G+FF F+    ++LP  + +   FA+ +TLG    + S   L
Sbjct: 26  SSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNGMKL---FAVFYTLGNLAALASTCFL 85

Query: 88  KGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSY 147
            GP  QL  MF   RL  T+I +  ++ TL  ++      L++ F +LQ L++ +Y++SY
Sbjct: 86  MGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSY 144

Query: 148 FP 149
            P
Sbjct: 146 IP 144

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy TrEMBL
Match: A0A0A0K5A9 (Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_7G200820 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.2e-87
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 60
           MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 1   MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 60

Query: 61  MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 120
           MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM
Sbjct: 61  MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 120

Query: 121 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR
Sbjct: 121 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 171

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy TrEMBL
Match: A0A6J1IZY9 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111480670 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGP+NQLAHMFSKERLPFT IFIGSMLGTLYVSMGLHSY+LSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSV +CFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMRCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy TrEMBL
Match: A0A6J1FPP1 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111446136 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.7e-78
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMV+MPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVIMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGP+NQLAHMFSKERLPFT IFIGSMLGTLYVSMGLHSY+LSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFL+SALTSSV +CFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLTSALTSSVMRCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy TrEMBL
Match: A0A6J1CCE7 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111010307 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.7e-76
Identity = 152/160 (95.00%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 72  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 131

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FII SFFALKGPKNQLAHMFSKERLPFT IFIGSMLGTLYVSMGLHSY+LSV F
Sbjct: 132 FTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVIF 191

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SV+QVLAL+YYAVSYFPGGSTGMKFLSSALTSSV KCFGR
Sbjct: 192 SVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 231

[Close]

BLAST of CSPI07G09460.1 vs. ExPASy TrEMBL
Match: A0A6J1FAT4 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111443623 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.1e-74
Identity = 148/159 (93.08%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGN QSATSNVPSGKALMYFGLFLATGVFFIFIAF +FLP+MVL+P KFAIC
Sbjct: 71  VSKGVRELPGNLQSATSNVPSGKALMYFGLFLATGVFFIFIAFALFLPIMVLVPHKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIG M GTLYVSMGLHSYILSV F
Sbjct: 131 FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGCMFGTLYVSMGLHSYILSVIF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFG 171
           SVLQVLALAYYAVSYFPGGSTGMKFLSSAL SSV KCFG
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALMSSVMKCFG 229

[Close]

BLAST of CSPI07G09460.1 vs. NCBI nr
Match: XP_004139775.1 (protein transport protein SFT2 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 2.1e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. NCBI nr
Match: XP_038896417.1 (protein transport protein SFT2 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFF LKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSV F
Sbjct: 131 FTLGCCFIIGSFFVLKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVIF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSV KCFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. NCBI nr
Match: XP_022981600.1 (protein transport protein SFT2 [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGP+NQLAHMFSKERLPFT IFIGSMLGTLYVSMGLHSY+LSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSV +CFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMRCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. NCBI nr
Match: XP_023525596.1 (protein transport protein SFT2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGP+NQLAHMFSKERLPFT IFIGSMLGTLYVSMGLHSY+LSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSV +CFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMRCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. NCBI nr
Match: XP_022940578.1 (protein transport protein SFT2-like [Cucurbita moschata] >KAG6607733.1 hypothetical protein SDJN03_01075, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037308.1 SFT2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.4 bits (768), Expect = 9.7e-78
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMV+MPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVIMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGP+NQLAHMFSKERLPFT IFIGSMLGTLYVSMGLHSY+LSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFL+SALTSSV +CFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLTSALTSSVMRCFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. TAIR 10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 251.5 bits (641), Expect = 4.8e-67
Identity = 130/160 (81.25%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR++PG+ QSATS++PSGKALMYFGL LA+GVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 66  VSKGVRDIPGSLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAIC 125

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFAL+GPKNQLAHM S ERLP T+ FI +M+GT+YVSM LHSYILSV F
Sbjct: 126 FTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLHSYILSVLF 185

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLAL YY +SYFPGGS+GM+FLSSALTSS  + FGR
Sbjct: 186 SVLQVLALVYYCISYFPGGSSGMRFLSSALTSSALRVFGR 225

[Close]

BLAST of CSPI07G09460.1 vs. TAIR 10
Match: AT5G56020.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-64
Identity = 128/160 (80.00%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR+   N QSATS++PSGKALMYFGL LA+GVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 74  VSKGVRD---NLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAIC 133

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFAL+GP+NQLAHM S ERLP T+ FI +M+GT+YVSM LHSYILSV F
Sbjct: 134 FTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHSYILSVIF 193

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           S LQV+ALAYY +SYFPGGS+GMKFLSS LTSSV + FGR
Sbjct: 194 SALQVIALAYYCISYFPGGSSGMKFLSSTLTSSVFRMFGR 230

[Close]

BLAST of CSPI07G09460.1 vs. TAIR 10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 39  FGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFS 98
           F   LATG+  +F++  +F      +P KFA+ FT G    IGS   L GP+ Q++ MF 
Sbjct: 41  FAASLATGLLLMFLSMIVF-----GIPIKFALLFTFGNVLAIGSTAFLMGPEQQMSMMFD 100

Query: 99  KERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFP 149
             R   T I+IG ++  L  ++ +HS IL+V   + ++ AL +Y++SY P
Sbjct: 101 PVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEICALIWYSLSYIP 145

The following BLAST results are available for this feature:

BLAST of CSPI07G09460.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38166	2.3e-13	34.88	Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]
Q9P6K1	9.0e-10	30.25	Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q8WV19	8.7e-05	31.15	Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1	[more]
O95562	4.3e-04	33.04	Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1	[more]
Q5SSN7	7.3e-04	30.33	Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1	[more]

BLAST of CSPI07G09460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5A9	4.2e-87	100.00	Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_7G200820 PE=3 SV=1	[more]
A0A6J1IZY9	1.2e-78	96.88	Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111480670 PE=3 SV=1	[more]
A0A6J1FPP1	4.7e-78	95.63	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111446136 PE=3 SV=...	[more]
A0A6J1CCE7	5.7e-76	95.00	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111010307 PE=3 SV...	[more]
A0A6J1FAT4	3.1e-74	93.08	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111443623 PE=3 SV=...	[more]

BLAST of CSPI07G09460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139775.1	2.1e-80	100.00	protein transport protein SFT2 [Cucumis sativus]	[more]
XP_038896417.1	1.5e-78	98.13	protein transport protein SFT2 [Benincasa hispida]	[more]
XP_022981600.1	2.5e-78	96.88	protein transport protein SFT2 [Cucurbita maxima]	[more]
XP_023525596.1	2.5e-78	96.88	protein transport protein SFT2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022940578.1	9.7e-78	95.63	protein transport protein SFT2-like [Cucurbita moschata] >KAG6607733.1 hypotheti...	[more]

BLAST of CSPI07G09460.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26550.1	4.8e-67	81.25	Got1/Sft2-like vescicle transport protein family	[more]
AT5G56020.1	5.0e-64	80.00	Got1/Sft2-like vescicle transport protein family	[more]
AT5G24170.1	2.7e-09	36.36	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 46..158 e-value: 4.2E-32 score: 110.9
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 12..171
None	No IPR available	PANTHER	PTHR23137:SF35	VESICLE TRANSPORT PROTEIN	coord: 12..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G09460	CSPI07G09460	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G09460.1.utr3p1	CSPI07G09460.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G09460.1.cds3	CSPI07G09460.1.cds3	CDS
CSPI07G09460.1.cds2	CSPI07G09460.1.cds2	CDS
CSPI07G09460.1.cds1	CSPI07G09460.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G09460.1	CSPI07G09460.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000139	Golgi membrane