CSPI07G08610.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G08610.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Location	Chr7: 6445079 .. 6445645 (+)
Sequence length	567
RNA-Seq Expression	CSPI07G08610.1
Synteny	CSPI07G08610.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATTGATACATCACAAGTCCAAGATATCCATTCTTTTTCGAGATTGGAATTCTTAAAAGAATTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATTTGCTTCCATCTAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTCCCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA

mRNA sequence

ATGATAATTGATACATCACAAGTCCAAGATATCCATTCTTTTTCGAGATTGGAATTCTTAAAAGAATTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATTTGCTTCCATCTAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTCCCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA

Coding sequence (CDS)

ATGATAATTGATACATCACAAGTCCAAGATATCCATTCTTTTTCGAGATTGGAATTCTTAAAAGAATTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATTTGCTTCCATCTAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTCCCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA

Protein sequence

MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR*

Homology

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-95
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy Swiss-Prot
Match: Q1KXQ8 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=4232 GN=ndhA PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 6.9e-88
Identity = 169/184 (91.85%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT++VQ I+SFSRLE LKE YGI+WVL+PI T VLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTTEVQAINSFSRLESLKEVYGIIWVLIPIFTPVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSY VIPFGY
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISS+AP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLSIGVFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy Swiss-Prot
Match: A0A390 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=13443 GN=ndhA PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-86
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT+++Q I+SF +LE LKE YGI+W+L+PI T VLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTTELQAINSFFKLESLKEVYGIIWILIPIFTLVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGD RLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDARLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLTIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy Swiss-Prot
Match: Q0ZIW3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhA PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.2e-86
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT +VQDI+SFSRLE+LKE YGI+W+LVPI T VLGITIGVL IVWLEREISAGIQQ
Sbjct: 1   MIIDTPEVQDINSFSRLEYLKEVYGIIWMLVPIFTPVLGITIGVLAIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSY +IPFG 
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLIIPFGS 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
            LVL+DL IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 NLVLSDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy Swiss-Prot
Match: Q06R75 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=ndhA PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.9e-86
Identity = 163/184 (88.59%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           +I +T+++Q IHSFSRLEFLKE YG +WVL+PILT VLGIT+GVLVIVWLEREISAGIQQ
Sbjct: 2   IIYNTTELQAIHSFSRLEFLKEVYGSIWVLIPILTLVLGITLGVLVIVWLEREISAGIQQ 61

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENL PSRGDTRLF+IGPSIAVISILLSYSVIPFGY
Sbjct: 62  RIGPEYAGPLGILQALADGTKLLFKENLFPSRGDTRLFTIGPSIAVISILLSYSVIPFGY 121

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RL+L DL IGVFLWIA+SS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 122 RLILGDLSIGVFLWIAVSSLAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 181

Query: 181 SISL 185
           SISL
Sbjct: 182 SISL 185

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy TrEMBL
Match: A0A286SB90 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhA PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy TrEMBL
Match: A0A218KGA1 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhA PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy TrEMBL
Match: A0A1X9Q1Y4 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy TrEMBL
Match: W8E3H6 (NADH-quinone oxidoreductase subunit H OS=Cucumis hystrix OX=396994 GN=ndhA PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. ExPASy TrEMBL
Match: A0A6B9MB92 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=ndhA PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of CSPI07G08610.1 vs. NCBI nr
Match: ASY97515.1 (NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of CSPI07G08610.1 vs. NCBI nr
Match: QHB76020.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of CSPI07G08610.1 vs. NCBI nr
Match: YP_009004096.1 (NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix] >Q2QD36.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 1; Short=NDH subunit 1; AltName: Full=NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus] >ALF03356.1 NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii] >AVE15387.1 NdhA [Cucumis sativus var. sativus] >AAZ94703.1 NADH dehydrogenase subunit 1 [Cucumis sativus] >ABI97468.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus] >ABI98799.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. NCBI nr
Match: ASY96384.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis] >ASY96644.1 NADH dehydrogenase subunit 1 [Cucumis melo var. conomon] >ASY96732.1 NADH dehydrogenase subunit 1 [Cucumis melo var. makuwa] >ASY96819.1 NADH dehydrogenase subunit 1 [Cucumis melo var. momordica] >ASY96906.1 NADH dehydrogenase subunit 1 [Cucumis melo var. dudaim] >ASY96993.1 NADH dehydrogenase subunit 1 [Cucumis melo var. cantalupo] >ASY97167.1 NADH dehydrogenase subunit 1 [Cucumis melo var. inodorus] >ASY97341.1 NADH dehydrogenase subunit 1 [Cucumis melo var. flexuosus] >QRW36611.1 NADH dehydrogenase subunit 1 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDI+SFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of CSPI07G08610.1 vs. NCBI nr
Match: QCY72897.1 (NdhA [Cucumis hystrix])

HSP 1 Score: 347.4 bits (890), Expect = 7.6e-92
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDI+SFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 294.3 bits (752), Expect = 7.1e-80
Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MII  + VQ I+SF +LE LKE YG++W+ VPI + VLGI  GVLVIVWLEREISAGIQQ
Sbjct: 1   MIIYATAVQTINSFVKLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENL PSRG+T LFSIGPSIAVISILLSYSVIPF  
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
            LVLADL IG+FLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of CSPI07G08610.1 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 119.4 bits (298), Expect = 3.1e-27
Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 28  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 87
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 88  ENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGL 147
           E + PS  +  LF + P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 148 LMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 187
           +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162

[Close]

BLAST of CSPI07G08610.1 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 119.4 bits (298), Expect = 3.1e-27
Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 28  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 87
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 88  ENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGL 147
           E + PS  +  LF + P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 148 LMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 187
           +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162

[Close]

BLAST of CSPI07G08610.1 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 119.4 bits (298), Expect = 3.1e-27
Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 28  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 87
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 88  ENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGL 147
           E + PS  +  LF + P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 148 LMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 187
           +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162

[Close]

BLAST of CSPI07G08610.1 vs. TAIR 10
Match: AT2G07785.1 (NADH dehydrogenase family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 56  AGIQQRIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSV 115
           A +Q+R GP+  G  G+LQ LADG+KL+ KE + PS  +  LF + P    +  L++ +V
Sbjct: 2   AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARAV 61

Query: 116 IPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSN 154
           +PF Y +VL+D  IG+    AISS+   G++++G  SN
Sbjct: 62  VPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAGRSSN 99

The following BLAST results are available for this feature:

BLAST of CSPI07G08610.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD36	1.5e-95	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q1KXQ8	6.9e-88	91.85	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=...	[more]
A0A390	1.3e-86	90.22	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=134...	[more]
Q0ZIW3	2.2e-86	90.22	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q06R75	2.9e-86	88.59	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Jasminum nudiflorum O...	[more]

BLAST of CSPI07G08610.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A286SB90	5.1e-94	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A218KGA1	5.7e-93	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A1X9Q1Y4	5.7e-93	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
W8E3H6	5.7e-93	100.00	NADH-quinone oxidoreductase subunit H OS=Cucumis hystrix OX=396994 GN=ndhA PE=3 ...	[more]
A0A6B9MB92	5.7e-93	99.46	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo subsp. m...	[more]

BLAST of CSPI07G08610.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ASY97515.1	1.1e-93	100.00	NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii]	[more]
QHB76020.1	1.2e-92	99.46	NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo]	[more]
YP_009004096.1	1.2e-92	100.00	NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix] >Q2QD36.1 RecName:...	[more]
ASY96384.1	1.5e-92	98.92	NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis] >ASY96644.1 NADH deh...	[more]
QCY72897.1	7.6e-92	99.46	NdhA [Cucumis hystrix]	[more]

BLAST of CSPI07G08610.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01100.1	7.1e-80	84.24	NADH dehydrogenase family protein	[more]
ATMG01120.1	3.1e-27	40.37	NADH dehydrogenase 1B	[more]
ATMG00516.1	3.1e-27	40.37	NADH dehydrogenase 1C	[more]
ATMG01275.1	3.1e-27	40.37	NADH dehydrogenase 1A	[more]
AT2G07785.1	1.8e-14	40.82	NADH dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 34..184 e-value: 3.6E-50 score: 171.0
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 26..184
None	No IPR available	PANTHER	PTHR11432:SF3	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1	coord: 26..184
IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site	PROSITE	PS00667	COMPLEX1_ND1_1	coord: 71..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G08610	CSPI07G08610	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G08610.1.cds1	CSPI07G08610.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G08610.1	CSPI07G08610.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding