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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. AACAATTCATCATCATCAAAAGCAGAGGGGGAGAGTGATGGAGAAGGTGAAGAAGGAGGGTGTGGTGGAAGGTGGAAAATATGATGAGTACAAGAAGAGGAAAGGAACAATAATTGGTGGTGGCAGTGGCTCCGGTTACAAAAGGGAGTGGAACACAGATGAAGGTCAATGCCTGTACGCAGGTTGA mRNA sequence AACAATTCATCATCATCAAAAGCAGAGGGGGAGAGTGATGGAGAAGGTGAAGAAGGAGGGTGTGGTGGAAGGTGGAAAATATGATGAGTACAAGAAGAGGAAAGGAACAATAATTGGTGGTGGCAGTGGCTCCGGTTACAAAAGGGAGTGGAACACAGATGAAGGTCAATGCCTGTACGCAGGTTGA Coding sequence (CDS) ATGGAGAAGGTGAAGAAGGAGGGTGTGGTGGAAGGTGGAAAATATGATGAGTACAAGAAGAGGAAAGGAACAATAATTGGTGGTGGCAGTGGCTCCGGTTACAAAAGGGAGTGGAACACAGATGAAGGTCAATGCCTGTACGCAGGTTGA Protein sequence MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG*
Homology
BLAST of CSPI07G04940.1 vs. ExPASy TrEMBL
Match: A0A0A0K744 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049280 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query: 1 MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 50
MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG
Sbjct: 1 MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 49
BLAST of CSPI07G04940.1 vs. NCBI nr
Match: KGN43646.1 (hypothetical protein Csa_017073 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 3.9e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query: 1 MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 50
MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG
Sbjct: 1 MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 49
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K744 | 1.9e-19 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049280 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN43646.1 | 3.9e-19 | 100.00 | hypothetical protein Csa_017073 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CSPI07G04940.1.cds1 | CSPI07G04940.1.cds1 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CSPI07G04940.1.utr5p1 | CSPI07G04940.1.utr5p1 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CSPI07G04940.1 | CSPI07G04940.1-protein | polypeptide |
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