CSPI07G04590.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G04590.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	E3 ubiquitin-protein ligase RMA1H1
Location	Chr7: 3419561 .. 3420585 (-)
Sequence length	1025
RNA-Seq Expression	CSPI07G04590.1
Synteny	CSPI07G04590.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATGTAAACATATATTTACTAGTCTTTGCTATTCTGTTCCATTTTACATTCTCTGTTGCTTCAAACATCTAGTGGTTGTTTGATCTTTCTAGTTTTATGGGGTTTTGATCCAATATTGATGTAAATTTGTTTATGTTTTGGCAGTTCAGGTATCTCACAAGGGTTGTGTTACAACAAAGAATATGGAAATGGAACAGTACTTTGAGGAGGCCAGCATCCAGATTAATTCATTTGGAGAGAATAAATCTTCTCTTGAAAATTGGAAATCTGTTTTGGATGCCATGGCTGAAACTCATTGTGATGCCTCTGGGCTATTTGATTGTAACATATGCTTAGAGACAGTGAAAGATCCTGTTGTTACACTTTGTGGCCATCTCTTTTGTTGGCCTTGCATTTATAAATGGATTCATTATCAGGACAGCTCTTTAGAGAAAAAAGCTCGACGACTCCCGCAATGTCCTGTTTGTAAGGCAGAAGTTTCTGATGCTACTCTAGTCCCACTTTATGGCAAAGGTGAAACTCAAGATCCATTCGAAAACAAGAATCCACAGCTTGGAATCGTGGTCCCTCGTAGGCCTCAGGGTCCTGCTTGCTTCGAGTCACCAAGGCCAACTTCTCACCCAACCTCTCACACAGTTGGTCCTCAATTCAGGGAAGGAAATTCAGATTCTGCTGATCAATCAAATGTTTACTATGCTGAAATGACAGGAGTGTTTGGAGAAGTGGTTTATGCAAGAATGTCGGGTGCGATAACGAATCTATATGCGTATCCGAATTCATATCCTCTTGTGTGGAGCAGTAGCCCAAGGATTAGAAGGCATATTTTGCAGACAGATGAATCACTCAACAGAATATGCATTTTTCTTTTCTGTTGTTTAATTATATGTCTTATTTTGTTCTGAGCCATAGATTTTCACTTTACTTTCCGACCCATTGTATAAATTTTAGTGTTGGTGGCGATTGGTCGCCCCTTGCTGGCCCTTGTTTCTGTAGTTGGTGTAAATAAGAATTTTGTTATAACC

mRNA sequence

CTTCATGTAAACATATATTTACTAGTCTTTGCTATTCTGTTCCATTTTACATTCTCTGTTGCTTCAAACATCTAGTGGTTGTTTGATCTTTCTAGTTTTATGGGGTTTTGATCCAATATTGATGTAAATTTGTTTATGTTTTGGCAGTTCAGGTATCTCACAAGGGTTGTGTTACAACAAAGAATATGGAAATGGAACAGTACTTTGAGGAGGCCAGCATCCAGATTAATTCATTTGGAGAGAATAAATCTTCTCTTGAAAATTGGAAATCTGTTTTGGATGCCATGGCTGAAACTCATTGTGATGCCTCTGGGCTATTTGATTGTAACATATGCTTAGAGACAGTGAAAGATCCTGTTGTTACACTTTGTGGCCATCTCTTTTGTTGGCCTTGCATTTATAAATGGATTCATTATCAGGACAGCTCTTTAGAGAAAAAAGCTCGACGACTCCCGCAATGTCCTGTTTGTAAGGCAGAAGTTTCTGATGCTACTCTAGTCCCACTTTATGGCAAAGGTGAAACTCAAGATCCATTCGAAAACAAGAATCCACAGCTTGGAATCGTGGTCCCTCGTAGGCCTCAGGGTCCTGCTTGCTTCGAGTCACCAAGGCCAACTTCTCACCCAACCTCTCACACAGTTGGTCCTCAATTCAGGGAAGGAAATTCAGATTCTGCTGATCAATCAAATGTTTACTATGCTGAAATGACAGGAGTGTTTGGAGAAGTGGTTTATGCAAGAATGTCGGGTGCGATAACGAATCTATATGCGTATCCGAATTCATATCCTCTTGTGTGGAGCAGTAGCCCAAGGATTAGAAGGCATATTTTGCAGACAGATGAATCACTCAACAGAATATGCATTTTTCTTTTCTGTTGTTTAATTATATGTCTTATTTTGTTCTGAGCCATAGATTTTCACTTTACTTTCCGACCCATTGTATAAATTTTAGTGTTGGTGGCGATTGGTCGCCCCTTGCTGGCCCTTGTTTCTGTAGTTGGTGTAAATAAGAATTTTGTTATAACC

Coding sequence (CDS)

ATGGAAATGGAACAGTACTTTGAGGAGGCCAGCATCCAGATTAATTCATTTGGAGAGAATAAATCTTCTCTTGAAAATTGGAAATCTGTTTTGGATGCCATGGCTGAAACTCATTGTGATGCCTCTGGGCTATTTGATTGTAACATATGCTTAGAGACAGTGAAAGATCCTGTTGTTACACTTTGTGGCCATCTCTTTTGTTGGCCTTGCATTTATAAATGGATTCATTATCAGGACAGCTCTTTAGAGAAAAAAGCTCGACGACTCCCGCAATGTCCTGTTTGTAAGGCAGAAGTTTCTGATGCTACTCTAGTCCCACTTTATGGCAAAGGTGAAACTCAAGATCCATTCGAAAACAAGAATCCACAGCTTGGAATCGTGGTCCCTCGTAGGCCTCAGGGTCCTGCTTGCTTCGAGTCACCAAGGCCAACTTCTCACCCAACCTCTCACACAGTTGGTCCTCAATTCAGGGAAGGAAATTCAGATTCTGCTGATCAATCAAATGTTTACTATGCTGAAATGACAGGAGTGTTTGGAGAAGTGGTTTATGCAAGAATGTCGGGTGCGATAACGAATCTATATGCGTATCCGAATTCATATCCTCTTGTGTGGAGCAGTAGCCCAAGGATTAGAAGGCATATTTTGCAGACAGATGAATCACTCAACAGAATATGCATTTTTCTTTTCTGTTGTTTAATTATATGTCTTATTTTGTTCTGA

Protein sequence

MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENKNPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGEVVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF*

Homology

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BLAST of CSPI07G04590.1 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-55
Identity = 116/243 (47.74%), Postives = 150/243 (61.73%), Query Frame = 0


Query: 16  SFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWI 75
           +F ++ + L  WKS+ D + E   + SG FDCNICL+ V +PV+TLCGHL+CWPCIYKWI
Sbjct: 13  TFNKHDTPLGKWKSMNDEVEE---NISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWI 72

Query: 76  HYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGK-GETQDPFENKNPQLGIVVPRRPQG 135
           ++Q  S E   ++ PQCPVCKAEVS+ TL+PLYG+ G++  P E K P LGIV+P+RP  
Sbjct: 73  YFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPS 132

Query: 136 PAC---FESPRPTSHPTS--HTVGPQFREGNSDSADQSNVYYAEMT------------GV 195
           P C   F  P   S+P+      G Q +      A Q +   + M              +
Sbjct: 133 PRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAYQGSYMSSPMLSPGGATANMLQHSM 192

Query: 196 FGEVVYARMSG-AITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICL 240
            GEV YAR+ G + T +Y YPNSY L  SSSPR+RR + Q D SL RIC FLFCC + CL
Sbjct: 193 IGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCL 252

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BLAST of CSPI07G04590.1 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-41
Identity = 103/263 (39.16%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWK--SVLDAMAETHCDASGLFDCNICLETVKDPV 60
           M ++Q FE+A++    +GE     ++ K   +  ++     D S  FDCNICL++V++PV
Sbjct: 1   MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPV 60

Query: 61  VTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFE 120
           VTLCGHLFCWPCI+KW+  Q  S   + +R  QCPVCK++VS +TLVPLYG+G      E
Sbjct: 61  VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEE 120

Query: 121 NKNPQLGIVVPRRPQGPAC---------------------FESPRPTSHPTSHTVGPQFR 180
            KN      VP+RP GP                       F SP+   +P S  +     
Sbjct: 121 GKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVM----- 180

Query: 181 EGNSDSADQSNVYYAEMTGVFGEVVYARMSGA-ITNLYAYPNSYPLVWSSSPRIRRHILQ 240
             +S+S   S V    M  V GE+V  R+ G  + + +AYP++Y L  +S PR+RR I+Q
Sbjct: 181 --SSNSLSYSAVLDPVMVMV-GEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQ 240

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BLAST of CSPI07G04590.1 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35
Identity = 84/218 (38.53%), Postives = 119/218 (54.59%), Query Frame = 0


Query: 42  SGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSD 101
           SG FDCNICL+T  DPVVTLCGHLFCWPCIYKW+H Q SS+     +   CPVCK+ ++ 
Sbjct: 39  SGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ-NNCPVCKSNITI 98

Query: 102 ATLVPLYGKGETQDPF---ENKNPQLGIVVPRRPQGPACFESPRPTSHPTS-----HTVG 161
            +LVPLYG+G +         K   L   +PRRP  P+   +P  ++   +      T+ 
Sbjct: 99  TSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRP-APSALRNPITSASSLNPSLQHQTLS 158

Query: 162 PQFRE--------GNSDSADQSNV----YYAEMTGVFGEVVYARMSGAITNLYAYPNSYP 221
           P F            ++S D +N     +   + G+FG++VY R+ G  TN  A P    
Sbjct: 159 PSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQ-- 218

Query: 222 LVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
                     + ++Q ++SLNR+ IF  CC+I+CL+LF
Sbjct: 219 ---------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

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BLAST of CSPI07G04590.1 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 88/211 (41.71%), Postives = 121/211 (57.35%), Query Frame = 0


Query: 37  THCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHYQDSSLEK-----KARRLPQ 96
           T  D+ G FDCNICL+ V+DPVVTLCGHLFCWPCI+KW +  ++S ++       R  P+
Sbjct: 11  TLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPK 70

Query: 97  CPVCKAEVSDATLVPLYGKGETQDPFENKNPQLGIVVPRRPQGPACFESPRPTSHPTSHT 156
           CPVCK++VS+ATLVP+YG+G+       K PQ G  VP RP GP                
Sbjct: 71  CPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPVY----------DLRG 130

Query: 157 VGPQFREGNSDSADQSNVYYA--EMTGVFGEVVYARMSG-AITNLYAYPNSYPLVWSSSP 216
           VG +  EG S    Q  +Y     + GV  E+VY R+ G + +N+  Y +        + 
Sbjct: 131 VGQRLGEGES----QRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYRD-------MNV 190

Query: 217 RIRRHILQTDESLNRICIFLFCCLIICLILF 240
           R RR  +Q +ESL+R+ +FL C + +CL LF
Sbjct: 191 RSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

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BLAST of CSPI07G04590.1 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 45  FDCNICLETVKDPVVTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATL 104
           F+CNICL+T KD V++LCGHLFCWPC+++W       LE +  R   CPVCKA +S   +
Sbjct: 39  FECNICLDTAKDAVISLCGHLFCWPCLHQW-------LETRPNR-QVCPVCKAGISRDKV 98

Query: 105 VPLYGKGET--QDPFENKNPQLGIVVPRRPQG 135
           +PLYG+G T  QDP E          P RPQG
Sbjct: 99  IPLYGRGSTGQQDPREK--------TPPRPQG 114

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BLAST of CSPI07G04590.1 vs. ExPASy TrEMBL
Match: A0A1S3C1W7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103495518 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.4e-133
Identity = 228/239 (95.40%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKWIH+QDSSLEK+ARRLPQCPVCKAEVSDATLVPLYGKGETQ+P E+K
Sbjct: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREG+SDS+DQSNVYYA++TG FGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICL+LF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of CSPI07G04590.1 vs. ExPASy TrEMBL
Match: A0A5A7SLT9 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003470 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.4e-133
Identity = 228/239 (95.40%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKWIH+QDSSLEK+ARRLPQCPVCKAEVSDATLVPLYGKGETQ+P E+K
Sbjct: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREG+SDS+DQSNVYYA++TG FGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICL+LF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of CSPI07G04590.1 vs. ExPASy TrEMBL
Match: A0A0A0K717 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047460 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-119
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFE+K
Sbjct: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHIL 216
           VVYARMSGAITNLYAYPNSYPLVWS    I R +L
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSMLVAIGRPLL 215

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BLAST of CSPI07G04590.1 vs. ExPASy TrEMBL
Match: A0A6J1D3G6 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111016683 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.9e-111
Identity = 197/239 (82.43%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKW+H+QDSS EK+ ++  QCPVCKAEVSDATLVPLYGKGETQDPFE+K
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           N QLG+VVPRRPQGP C E+ RPTSH       PQFR GNS S   SN YYA+MTGVFGE
Sbjct: 121 NSQLGVVVPRRPQGPGCSETSRPTSHS-----APQFRRGNS-SDQSSNNYYAQMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           ++YARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICL+LF
Sbjct: 181 MIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 233

[Close]

BLAST of CSPI07G04590.1 vs. ExPASy TrEMBL
Match: A0A6J1JKZ9 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111486145 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110
Identity = 200/239 (83.68%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEE    INSFGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKW+H+QDSS EK+ +RL QCPVCKAEVSDATLVPLYGKGETQDPFE+K
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           N QLGIVVPRRPQGPACFESPR TSHP       QF++GN   +DQSN+YYAE  GVFGE
Sbjct: 121 NSQLGIVVPRRPQGPACFESPRATSHPVL-----QFQQGN--LSDQSNIYYAE--GVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           +VYARM GAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCC IICL+LF
Sbjct: 181 MVYARMFGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 226

[Close]

BLAST of CSPI07G04590.1 vs. NCBI nr
Match: XP_011658745.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031745015.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KAE8645771.1 hypothetical protein Csa_020520 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-137
Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFE+K
Sbjct: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 239

[Close]

BLAST of CSPI07G04590.1 vs. NCBI nr
Match: XP_008455327.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455328.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455329.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >KAA0031578.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK07030.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa])

HSP 1 Score: 484.6 bits (1246), Expect = 5.0e-133
Identity = 228/239 (95.40%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKWIH+QDSSLEK+ARRLPQCPVCKAEVSDATLVPLYGKGETQ+P E+K
Sbjct: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREG+SDS+DQSNVYYA++TG FGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICL+LF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of CSPI07G04590.1 vs. NCBI nr
Match: XP_038888270.1 (E3 ubiquitin-protein ligase RMA1H1 [Benincasa hispida])

HSP 1 Score: 474.2 bits (1219), Expect = 6.8e-130
Identity = 225/239 (94.14%), Postives = 234/239 (97.91%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKW+HYQDSSLEK+ARRLPQCPVCKAEVSDATLVPLYGKG+T+D FE+K
Sbjct: 61  LCGHLFCWPCIYKWLHYQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGKTRDSFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           N QLGIVVPRRP GPACFESPRPTSHPTSHTV PQ+R+GNSDS+DQSNVYYAEMTG FGE
Sbjct: 121 NTQLGIVVPRRPHGPACFESPRPTSHPTSHTV-PQYRQGNSDSSDQSNVYYAEMTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICL+LF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 238

[Close]

BLAST of CSPI07G04590.1 vs. NCBI nr
Match: XP_022147841.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022147842.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia])

HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110
Identity = 197/239 (82.43%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKW+H+QDSS EK+ ++  QCPVCKAEVSDATLVPLYGKGETQDPFE+K
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           N QLG+VVPRRPQGP C E+ RPTSH       PQFR GNS S   SN YYA+MTGVFGE
Sbjct: 121 NSQLGVVVPRRPQGPGCSETSRPTSHS-----APQFRRGNS-SDQSSNNYYAQMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           ++YARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICL+LF
Sbjct: 181 MIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 233

[Close]

BLAST of CSPI07G04590.1 vs. NCBI nr
Match: XP_022988938.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988939.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988940.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 409.1 bits (1050), Expect = 2.7e-110
Identity = 200/239 (83.68%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEE    INSFGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFENK 120
           LCGHLFCWPCIYKW+H+QDSS EK+ +RL QCPVCKAEVSDATLVPLYGKGETQDPFE+K
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180
           N QLGIVVPRRPQGPACFESPR TSHP       QF++GN   +DQSN+YYAE  GVFGE
Sbjct: 121 NSQLGIVVPRRPQGPACFESPRATSHPVL-----QFQQGN--LSDQSNIYYAE--GVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
           +VYARM GAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCC IICL+LF
Sbjct: 181 MVYARMFGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 226

[Close]

BLAST of CSPI07G04590.1 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 103/263 (39.16%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWK--SVLDAMAETHCDASGLFDCNICLETVKDPV 60
           M ++Q FE+A++    +GE     ++ K   +  ++     D S  FDCNICL++V++PV
Sbjct: 1   MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPV 60

Query: 61  VTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFE 120
           VTLCGHLFCWPCI+KW+  Q  S   + +R  QCPVCK++VS +TLVPLYG+G      E
Sbjct: 61  VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEE 120

Query: 121 NKNPQLGIVVPRRPQGPAC---------------------FESPRPTSHPTSHTVGPQFR 180
            KN      VP+RP GP                       F SP+   +P S  +     
Sbjct: 121 GKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVM----- 180

Query: 181 EGNSDSADQSNVYYAEMTGVFGEVVYARMSGA-ITNLYAYPNSYPLVWSSSPRIRRHILQ 240
             +S+S   S V    M  V GE+V  R+ G  + + +AYP++Y L  +S PR+RR I+Q
Sbjct: 181 --SSNSLSYSAVLDPVMVMV-GEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQ 240

[Close]

BLAST of CSPI07G04590.1 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 103/263 (39.16%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWK--SVLDAMAETHCDASGLFDCNICLETVKDPV 60
           M ++Q FE+A++    +GE     ++ K   +  ++     D S  FDCNICL++V++PV
Sbjct: 1   MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPV 60

Query: 61  VTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFE 120
           VTLCGHLFCWPCI+KW+  Q  S   + +R  QCPVCK++VS +TLVPLYG+G      E
Sbjct: 61  VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEE 120

Query: 121 NKNPQLGIVVPRRPQGPAC---------------------FESPRPTSHPTSHTVGPQFR 180
            KN      VP+RP GP                       F SP+   +P S  +     
Sbjct: 121 GKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVM----- 180

Query: 181 EGNSDSADQSNVYYAEMTGVFGEVVYARMSGA-ITNLYAYPNSYPLVWSSSPRIRRHILQ 240
             +S+S   S V    M  V GE+V  R+ G  + + +AYP++Y L  +S PR+RR I+Q
Sbjct: 181 --SSNSLSYSAVLDPVMVMV-GEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQ 240

[Close]

BLAST of CSPI07G04590.1 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-36
Identity = 84/218 (38.53%), Postives = 119/218 (54.59%), Query Frame = 0


Query: 42  SGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSD 101
           SG FDCNICL+T  DPVVTLCGHLFCWPCIYKW+H Q SS+     +   CPVCK+ ++ 
Sbjct: 39  SGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ-NNCPVCKSNITI 98

Query: 102 ATLVPLYGKGETQDPF---ENKNPQLGIVVPRRPQGPACFESPRPTSHPTS-----HTVG 161
            +LVPLYG+G +         K   L   +PRRP  P+   +P  ++   +      T+ 
Sbjct: 99  TSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRP-APSALRNPITSASSLNPSLQHQTLS 158

Query: 162 PQFRE--------GNSDSADQSNV----YYAEMTGVFGEVVYARMSGAITNLYAYPNSYP 221
           P F            ++S D +N     +   + G+FG++VY R+ G  TN  A P    
Sbjct: 159 PSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQ-- 218

Query: 222 LVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 240
                     + ++Q ++SLNR+ IF  CC+I+CL+LF
Sbjct: 219 ---------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CSPI07G04590.1 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 88/211 (41.71%), Postives = 121/211 (57.35%), Query Frame = 0


Query: 37  THCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHYQDSSLEK-----KARRLPQ 96
           T  D+ G FDCNICL+ V+DPVVTLCGHLFCWPCI+KW +  ++S ++       R  P+
Sbjct: 11  TLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPK 70

Query: 97  CPVCKAEVSDATLVPLYGKGETQDPFENKNPQLGIVVPRRPQGPACFESPRPTSHPTSHT 156
           CPVCK++VS+ATLVP+YG+G+       K PQ G  VP RP GP                
Sbjct: 71  CPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPVY----------DLRG 130

Query: 157 VGPQFREGNSDSADQSNVYYA--EMTGVFGEVVYARMSG-AITNLYAYPNSYPLVWSSSP 216
           VG +  EG S    Q  +Y     + GV  E+VY R+ G + +N+  Y +        + 
Sbjct: 131 VGQRLGEGES----QRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYRD-------MNV 190

Query: 217 RIRRHILQTDESLNRICIFLFCCLIICLILF 240
           R RR  +Q +ESL+R+ +FL C + +CL LF
Sbjct: 191 RSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CSPI07G04590.1 vs. TAIR 10
Match: AT2G23780.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 9.8e-26
Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 18  GENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHY 77
           GE+ +S     S  D+  +T+ D  G F+CNIC E  +DP+VTLCGHLFCWPC+Y+W+H+
Sbjct: 4   GESSTS----TSYSDSNNDTN-DQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHH 63

Query: 78  QDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQ-DPFENKNPQLGIVVPRRPQG 135
              S E        CPVCKA V D  LVPLYG+G+ Q DP   + P  G+ +P RP G
Sbjct: 64  HSHSQE--------CPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYP--GLRIPNRPTG 106

The following BLAST results are available for this feature:

BLAST of CSPI07G04590.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	2.6e-55	47.74	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	2.1e-41	39.16	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q8GUK7	2.3e-35	38.53	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
P93030	1.9e-34	41.71	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q5ZIR9	1.9e-18	50.00	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]

BLAST of CSPI07G04590.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1W7	2.4e-133	95.40	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103495518 PE=4 ...	[more]
A0A5A7SLT9	2.4e-133	95.40	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0K717	4.5e-119	96.28	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047460 P...	[more]
A0A6J1D3G6	5.9e-111	82.43	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1JKZ9	1.3e-110	83.68	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]

BLAST of CSPI07G04590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658745.1	1.2e-137	99.58	E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031745015.1 E3 ubiquiti...	[more]
XP_008455327.1	5.0e-133	95.40	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455328.1 PRE...	[more]
XP_038888270.1	6.8e-130	94.14	E3 ubiquitin-protein ligase RMA1H1 [Benincasa hispida]	[more]
XP_022147841.1	1.2e-110	82.43	E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022147842.1 E3...	[more]
XP_022988938.1	2.7e-110	83.68	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988939.1 E3 ub...	[more]

BLAST of CSPI07G04590.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03510.1	1.5e-42	39.16	RING membrane-anchor 1	[more]
AT4G03510.2	1.5e-42	39.16	RING membrane-anchor 1	[more]
AT4G27470.1	1.6e-36	38.53	RING membrane-anchor 3	[more]
AT4G28270.1	1.4e-35	41.71	RING membrane-anchor 2	[more]
AT2G23780.1	9.8e-26	48.31	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 47..95 e-value: 2.3E-10 score: 50.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 47..96 score: 13.167916
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 47..95 e-value: 8.0E-10 score: 38.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 5..111 e-value: 2.4E-18 score: 67.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..162
None	No IPR available	PANTHER	PTHR12313:SF59	E3 UBIQUITIN-PROTEIN LIGASE RMA1	coord: 3..239
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 45..97 e-value: 8.8514E-24 score: 88.13
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 46..101
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 3..239
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 62..71

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G04590	CSPI07G04590	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G04590.1.utr3p1	CSPI07G04590.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G04590.1.cds1	CSPI07G04590.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G04590.1.utr5p1	CSPI07G04590.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G04590.1	CSPI07G04590.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity