CSPI06G33040.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACGAAGCTTACTCTCTTTATATTTTCATTAGTTTGTTACCATAAAGTTATCCCTTTGAATACCCAAAACTAAACCCTGAGGCCAACGCTAACGTCTCTTCTCCGACTCTGACCATCACCTTTGAAAGCGGAGGCCGTGGTTTTTCGGCCGGGAGATGCAAAAACAATGCTTCAGGCTCTAAATCTAAGACCCCCACCTCCCATTCTCGCCCTATCCTTCTCAGTTTCCGATGACCCAACTTGTTCCCCCCTCCCATTACGTCGCCCTCGTAATCCAATGCACAATTGGGCGCTTTTGCAGTCCAAACTCAAGTGCAACGGCAGATTCTCATGCCTTTTCTCCGACAATCGAAAAGAGGTGCTGTGTGTTTCTTCTCTTTATTTGTTTCAACCTTCAACTGATTACAATTTGTAGCTTCTTCTTTTTCCTGTTCTGTTCGTTTTCAATAACCTAGTTAATTTTCTGAGATTGATATATCCGGTCCGATTTTCTCTACTTTTTCGAGGAAAGATAAATGCGTGGCCAAACTTTATGCAAGGGATTTGCGTTCTGTGGCTTACTTTTTGGGGGAAATTTTGAGAACATATGGAAGGAACACTGAGGTTGGGTAAATACTTCAAAGCTAGGATGGGAGATAGGATGATTTGGAGTTGGAACTTAATACCCATAACAAGCTTCAAATGGATGGAATGGGATATCTTTGTTTGGTATTGCTAGCTATAGCTATTTGTAGATTTATTAGAAAATTTTAGTGGATATTAATCTTCCTATACTTGAATTCTTTAACTTAGGAAGCCACTAATTTGCGCTTTCGTATGAAGAAATGTGGAAGCTGGTCTGCATGCACTCTTGTTTTTAGTACAATAGGCCGTGAAGTCATTGAGTTATGTTCACTTTAGCGATTGCGTGTACTCTGTTGATGCTGCCTTCAACTGTATCTGTCCGCTTTGGCTTTTACTAAATTTGGTCCTAAGAGGAAAAAAAGGGTCAATAAATCAAGTAGACTGGCTGCTGAAAAACTGAAGTATGAATTGTTCTAATCCTGTTTGAGAGAGGACTCAACTTGTTTCTATCTTTTTCAATTATTTTAAGGAAGCATCCTTCTATCCTGTATTTTTTTGTCCATGAGAATTATAAATGATCAACATTTATTCTTGGTAGCTGTAGTTGCCCAGTTACATAATTTTCCTTTTCCCAGGGCAGTGCCACTGTTGTTAGATATGCATATCCATCCCTTCACTTAACTCTCAAAAGAAGGAAAAGAAAAAAAAGAACAACAATGAGAATTGACTTTATGTTGTTATTTAACTTTCTGGATCCAATGTGCACCATATACAGACATGCAGTGCATTCTTCTTCATTATCGGGCCCAACAAAGTGTTTTTAGGAAATCTTGCTTAAATTTGCCTTCTCTCTTTGTTGACATCAGGAACAAGCAAGGAAGGCATTAGAAAGTGCACTTGGGGGAAAGAAAAATGAATTTGAGAAATGGAATAATGAAATAAAGAAAAGAGAGGAGGTTGGCGGTGGCAGTGGCAGTGGTGGAGGACGAGGAGGTTGGTTTGGATCAGGCGGATGGTTTGGTTGGTCAGATGACCAATTCTGGCCAGAAGCACAACAGACCAGTCTTGCTGTTCTTGGTATAATTGTGATGGTAAGTATTTTCCTTTATAATCCATCGTAGATTCAGGTTATAACTATTTTAGAATGCAATCTAACTAACTAATCTCTCATTTCACTGGTGCGAATTTTGAATAAAAGTATCTCCTAGTTGCAAAGGGTGAACTGTTGCTTGCTGTTGTTTTCAACCCACTGCTTTATGCTTTGCGCGGAACAAGAAATGGATTGACTTTTGTAACTTCAAAAATTTTGAGAAAGTCCTCTGCTAGTAATTATGCTGAGGTTGAGATGATTTCAAACAAAGATGTCTCTGCCAAAGATAGAGTTGCAAGGAAATGGGGGAGCGATTGATCTTTTTGACCTTCAAATAGGTTGCTATGTAATTTTTTGGAAAATGTTTGGCGTCTAGAAATAGTTCTTTTTTTTTTTTTTTTATGTGGATTACTTTATTTCATGTTAAAGAATAGTTTCCTTTCAAACCAGATGCTTGAGTTTGTTCCCTTCACCAAAAATCACCCCAAAAGTGAAATATATTGGATTGTATAATTACTCTTCAAACTTTGTTATATCTAATCTGACATTTATTTTCA GACGAAGCTTACTCTCTTTATATTTTCATTAGTTTGTTACCATAAAGTTATCCCTTTGAATACCCAAAACTAAACCCTGAGGCCAACGCTAACGTCTCTTCTCCGACTCTGACCATCACCTTTGAAAGCGGAGGCCGTGGTTTTTCGGCCGGGAGATGCAAAAACAATGCTTCAGGCTCTAAATCTAAGACCCCCACCTCCCATTCTCGCCCTATCCTTCTCAGTTTCCGATGACCCAACTTGTTCCCCCCTCCCATTACGTCGCCCTCGTAATCCAATGCACAATTGGGCGCTTTTGCAGTCCAAACTCAAGTGCAACGGCAGATTCTCATGCCTTTTCTCCGACAATCGAAAAGAGGAACAAGCAAGGAAGGCATTAGAAAGTGCACTTGGGGGAAAGAAAAATGAATTTGAGAAATGGAATAATGAAATAAAGAAAAGAGAGGAGGTTGGCGGTGGCAGTGGCAGTGGTGGAGGACGAGGAGGTTGGTTTGGATCAGGCGGATGGTTTGGTTGGTCAGATGACCAATTCTGGCCAGAAGCACAACAGACCAGTCTTGCTGTTCTTGGTATAATTGTGATGTATCTCCTAGTTGCAAAGGGTGAACTGTTGCTTGCTGTTGTTTTCAACCCACTGCTTTATGCTTTGCGCGGAACAAGAAATGGATTGACTTTTGTAACTTCAAAAATTTTGAGAAAGTCCTCTGCTAGTAATTATGCTGAGGTTGAGATGATTTCAAACAAAGATGTCTCTGCCAAAGATAGAGTTGCAAGGAAATGGGGGAGCGATTGATCTTTTTGACCTTCAAATAGGTTGCTATGTAATTTTTTGGAAAATGTTTGGCGTCTAGAAATAGTTCTTTTTTTTTTTTTTTTATGTGGATTACTTTATTTCATGTTAAAGAATAGTTTCCTTTCAAACCAGATGCTTGAGTTTGTTCCCTTCACCAAAAATCACCCCAAAAGTGAAATATATTGGATTGTATAATTACTCTTCAAACTTTGTTATATCTAATCTGACATTTATTTTCA ATGCTTCAGGCTCTAAATCTAAGACCCCCACCTCCCATTCTCGCCCTATCCTTCTCAGTTTCCGATGACCCAACTTGTTCCCCCCTCCCATTACGTCGCCCTCGTAATCCAATGCACAATTGGGCGCTTTTGCAGTCCAAACTCAAGTGCAACGGCAGATTCTCATGCCTTTTCTCCGACAATCGAAAAGAGGAACAAGCAAGGAAGGCATTAGAAAGTGCACTTGGGGGAAAGAAAAATGAATTTGAGAAATGGAATAATGAAATAAAGAAAAGAGAGGAGGTTGGCGGTGGCAGTGGCAGTGGTGGAGGACGAGGAGGTTGGTTTGGATCAGGCGGATGGTTTGGTTGGTCAGATGACCAATTCTGGCCAGAAGCACAACAGACCAGTCTTGCTGTTCTTGGTATAATTGTGATGTATCTCCTAGTTGCAAAGGGTGAACTGTTGCTTGCTGTTGTTTTCAACCCACTGCTTTATGCTTTGCGCGGAACAAGAAATGGATTGACTTTTGTAACTTCAAAAATTTTGAGAAAGTCCTCTGCTAGTAATTATGCTGAGGTTGAGATGATTTCAAACAAAGATGTCTCTGCCAAAGATAGAGTTGCAAGGAAATGGGGGAGCGATTGA MLQALNLRPPPPILALSFSVSDDPTCSPLPLRRPRNPMHNWALLQSKLKCNGRFSCLFSDNRKEEQARKALESALGGKKNEFEKWNNEIKKREEVGGGSGSGGGRGGWFGSGGWFGWSDDQFWPEAQQTSLAVLGIIVMYLLVAKGELLLAVVFNPLLYALRGTRNGLTFVTSKILRKSSASNYAEVEMISNKDVSAKDRVARKWGSD* Homology
BLAST of CSPI06G33040.1 vs. ExPASy TrEMBL
Match: A0A1S3B0A1 (uncharacterized protein LOC103484656 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484656 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.8e-99 Identity = 191/208 (91.83%), Postives = 196/208 (94.23%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. ExPASy TrEMBL
Match: A0A1S3AZU3 (uncharacterized protein LOC103484656 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484656 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97 Identity = 191/209 (91.39%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. ExPASy TrEMBL
Match: A0A5D3CM52 (Sulfate adenylyltransferase subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006010 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88 Identity = 192/291 (65.98%), Postives = 197/291 (67.70%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. ExPASy TrEMBL
Match: A0A6J1GG46 (uncharacterized protein LOC111453631 OS=Cucurbita moschata OX=3662 GN=LOC111453631 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82 Identity = 170/212 (80.19%), Postives = 181/212 (85.38%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. ExPASy TrEMBL
Match: A0A6J1BSB9 (uncharacterized protein LOC111005307 OS=Momordica charantia OX=3673 GN=LOC111005307 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81 Identity = 165/212 (77.83%), Postives = 181/212 (85.38%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. NCBI nr
Match: XP_004134798.1 (uncharacterized protein LOC101207146 [Cucumis sativus] >KAE8647643.1 hypothetical protein Csa_002771 [Cucumis sativus]) HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. NCBI nr
Match: XP_008440069.1 (PREDICTED: uncharacterized protein LOC103484656 isoform X2 [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98 Identity = 191/208 (91.83%), Postives = 196/208 (94.23%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. NCBI nr
Match: XP_008440068.1 (PREDICTED: uncharacterized protein LOC103484656 isoform X1 [Cucumis melo]) HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97 Identity = 191/209 (91.39%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. NCBI nr
Match: XP_038881277.1 (uncharacterized protein LOC120072833 [Benincasa hispida]) HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91 Identity = 181/208 (87.02%), Postives = 189/208 (90.87%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. NCBI nr
Match: TYK13003.1 (Sulfate adenylyltransferase subunit 2 [Cucumis melo var. makuwa]) HSP 1 Score: 335.5 bits (859), Expect = 3.3e-88 Identity = 192/291 (65.98%), Postives = 197/291 (67.70%), Query Frame = 0
BLAST of CSPI06G33040.1 vs. TAIR 10
Match: AT5G20130.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 104/180 (57.78%), Postives = 129/180 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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