CSPI06G22350.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI06G22350.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transcription factor bHLH160
Location	Chr6: 20271126 .. 20273143 (+)
Sequence length	600
RNA-Seq Expression	CSPI06G22350.1
Synteny	CSPI06G22350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTGATACCATGGGAGGAACATATATTGATTGATGAAGACAATGGAATTGAAGAGAAAGAAAATCCATTAAGAAATTGGAGTAATAATAATGGGGAATTAGAAGAAATATTTATCGATATCCAATCATCAAAAAGTGGAGAAGAAGCATTATTATTACCAAATGAAATAATTGGATCACTTGTGGAAGATTCAACATTATTGGGTTTGGAGGAAAATGATCATAGTATTGATGGAGTTTTAGAGAGAGAAAATTCAAAATTATTTCCACCAACATCCATTAATGTTCATAATGAAGAACCCTCAAATTCAAATAAAGCAAATGCAAAGAAAGAAGAACACAATGCTAGAGAAAGACAAAGGAGGTTGAAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAAGGTTAGTATATATTTCACTTTTTTATTTTTATTGTTGTTGGTTTAAGATTTTTTTTTTCCTTTATCCATAAATTTTAAACAATGTCTTATAGGTTTTTGAAGTTTTTAAAAACTATAAAATGTTCAATCTTATATATAGTCAAGGGACAACCTCGACAGAAAAGATCCTTATGAGAATCTAGTAAATAATTTGAAGTATGAATTCTTGATCATGAATACGTTCTAGAAGTGCTCAAACCCACCAAATTTACTTCAATTTCGATCCTTAGATAAAGATTACCTTAACATCAAACCTGTTGAGCTAAATAATATGTTTTTAGACTCAAATATTGCCATAAGATCGAAAAGCTCTCTGGACAAAAGAGATCAAAATTCATTCATTGTAAAAACTATCCAAAGTTAAATATGATAAGGCAAAACCTTTTATATGGTCTCCAAGTGAAGCCCTAATGCCAAATGATCAATCATGCATGCCAAAATTACAAAATAACATCTACTTATAAATATTTCACAAAAGGAATAAAATTGAAAAACATAAAAGTTATGATCAATATATATAGATGAAAATATATGAACAATATATAGTTTGATATCCTAGGCACTTCAAATCAAAAAAGGGTTTGGAGTCACTACAACACATGAGGTTTAAGTGAGTTGAATACTAAATATTCTTCACAATAATTTGAAACCCTAATAATAATTTGAAGTTTTGTTTGCAGAAAAGATGGAGCGCAGGAACCATAATCGACAAAGTTGTAGACTACATTCCAACACTACAAAAAGAGATTGAAAATATGAACCAAAAGAAACAAAAACTGATAAAAGCAAAAAACAATATGAGCAATAATAATGAAAGAGTATCAGTATCAGTTGAAGAAAATGAAGGGTTAGATCAATATTATAATAATATCAATCCAACTGTTTCAATCCATCAACTTTGCAAAGGAGAAGTCATAATCCAAATATGCATAAACCCAAGAAATAATAATAATAAGTTGTCAAATTTGATAGAAAAGGCAGAAGCAGAAGGCCTAAGGATCATTGGTGCTTCCACAGTTTCTGTTTCTCATGACCATCAGATTCTTACCTCCCATTTGCATATTCAGGTATTTGTACAATTATGTTCCTTTGGAAAAAAAAATACTTATGCTTTGTTTTCGTTTTCGTTTTCCATTATATTATATATATATAGCCTTTGGGGTGAAATAATTTGTATTTTCAATTAAAGTTATGCCAATTTGATGATATATAACAACAATTTCATTACTTTTTAAAAATTAGATTTAGGTTAAATGATAAGAAATGCATTAACTTTTCAAGTTTTGGAACCCCATAATCTTAATTTATTGATTATACAGTCTCAAATGCTGTTAATCATTAAAAATTCACGAGATTGAGGACATCCATCCAACAGAAAGAACCCTAACATTCTTGTTAAGAAAGATTTAAAAGAAGTGATGGGTTTCATTATTACACCTTGAATTGATGATGAATTGTATATTTGTGCAGATGATGGATAGGAGTTTACAAGAAGCTGCTGATTATGAATCAATGTTAAGAAAAAGGGTAATCTCTTGGCTATGTTGA

mRNA sequence

ATGTCATTGATACCATGGGAGGAACATATATTGATTGATGAAGACAATGGAATTGAAGAGAAAGAAAATCCATTAAGAAATTGGAGTAATAATAATGGGGAATTAGAAGAAATATTTATCGATATCCAATCATCAAAAAGTGGAGAAGAAGCATTATTATTACCAAATGAAATAATTGGATCACTTGTGGAAGATTCAACATTATTGGGTTTGGAGGAAAATGATCATAGTATTGATGGAGTTTTAGAGAGAGAAAATTCAAAATTATTTCCACCAACATCCATTAATGTTCATAATGAAGAACCCTCAAATTCAAATAAAGCAAATGCAAAGAAAGAAGAACACAATGCTAGAGAAAGACAAAGGAGGTTGAAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAAGGCAGAAGCAGAAGGCCTAAGGATCATTGGTGCTTCCACAGTTTCTGTTTCTCATGACCATCAGATTCTTACCTCCCATTTGCATATTCAGATGATGGATAGGAGTTTACAAGAAGCTGCTGATTATGAATCAATGTTAAGAAAAAGGGTAATCTCTTGGCTATGTTGA

Coding sequence (CDS)

ATGTCATTGATACCATGGGAGGAACATATATTGATTGATGAAGACAATGGAATTGAAGAGAAAGAAAATCCATTAAGAAATTGGAGTAATAATAATGGGGAATTAGAAGAAATATTTATCGATATCCAATCATCAAAAAGTGGAGAAGAAGCATTATTATTACCAAATGAAATAATTGGATCACTTGTGGAAGATTCAACATTATTGGGTTTGGAGGAAAATGATCATAGTATTGATGGAGTTTTAGAGAGAGAAAATTCAAAATTATTTCCACCAACATCCATTAATGTTCATAATGAAGAACCCTCAAATTCAAATAAAGCAAATGCAAAGAAAGAAGAACACAATGCTAGAGAAAGACAAAGGAGGTTGAAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAAGGCAGAAGCAGAAGGCCTAAGGATCATTGGTGCTTCCACAGTTTCTGTTTCTCATGACCATCAGATTCTTACCTCCCATTTGCATATTCAGATGATGGATAGGAGTTTACAAGAAGCTGCTGATTATGAATCAATGTTAAGAAAAAGGGTAATCTCTTGGCTATGTTGA

Protein sequence

MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIGSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARERQRRLKLSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQMMDRSLQEAADYESMLRKRVISWLC*

Homology

[Close]

BLAST of CSPI06G22350.1 vs. ExPASy TrEMBL
Match: A0A0A0KGG0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G417860 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG 60
           MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG
Sbjct: 1   MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG 60

Query: 61  SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARER 120
           SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARER
Sbjct: 61  SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARER 120

Query: 121 QRRLKLSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQMMDRSL 180
           QRRLKLSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQMMDRSL
Sbjct: 121 QRRLKLSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQMMDRSL 180

Query: 181 QEAADYESMLRKRVISWLC 200
           QEAADYESMLRKRVISWLC
Sbjct: 181 QEAADYESMLRKRVISWLC 199

[Close]

BLAST of CSPI06G22350.1 vs. ExPASy TrEMBL
Match: A0A1S3BLZ5 (transcription factor bHLH100 OS=Cucumis melo OX=3656 GN=LOC103491303 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70
Identity = 176/304 (57.89%), Postives = 185/304 (60.86%), Query Frame = 0


Query: 1   MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG 60
           MSL PWEEHILIDEDNGIEE+E PLRNWSNNNGELEEI   I+ SKSGEEALLLPNEIIG
Sbjct: 1   MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEI---IRLSKSGEEALLLPNEIIG 60

Query: 61  -SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARE 120
            SLVEDSTLLGL+E+D +I GVLERENSKLFPP SIN HNEEPSNSNK NAKKEEHNARE
Sbjct: 61  RSLVEDSTLLGLKESD-NIYGVLERENSKLFPPPSINAHNEEPSNSNKENAKKEEHNARE 120

Query: 121 RQRRLKLSHSYFSLRSLLPNARRS------------------------------------ 180
           RQRRL+LSHSYFSLRSLLPNARRS                                    
Sbjct: 121 RQRRLELSHSYFSLRSLLPNARRSKKRWSSGTIIDKVVDYIPTLQKEIEKMNQKKQNLIK 180

Query: 181 ------------------------------------------------------------ 200
                                                                       
Sbjct: 181 AKERIMSNNNAERVLVSVDENEGLDNQYYNNINPTVSIHQLCEGEVIIQICINPRNSNNN 240

[Close]

BLAST of CSPI06G22350.1 vs. ExPASy TrEMBL
Match: A0A6J1HFM3 (transcription factor bHLH160 OS=Cucurbita moschata OX=3662 GN=LOC111463877 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-23
Identity = 108/290 (37.24%), Postives = 126/290 (43.45%), Query Frame = 0


Query: 1   MSLIPWEE-HILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEII 60
           M++ PWE  + L DE+NG E+   P                     K GE    L  EI 
Sbjct: 1   MAVAPWESYYTLTDENNGEEQTLLP---------------------KGGE---ALCGEIG 60

Query: 61  GSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARE 120
           GS+ E + LLGLEE+   I G   REN+   P  + N+   EPS     NAKKEEHNARE
Sbjct: 61  GSMAEVAALLGLEED---IYGGFGRENAAFPPAMNANI---EPS-----NAKKEEHNARE 120

Query: 121 RQRRLKLSHSYFSLRSLLPNARRS------------------------------------ 180
           RQRR++LS  YFSLRSLLPNARRS                                    
Sbjct: 121 RQRRMELSQLYFSLRSLLPNARRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQKMIK 180

Query: 181 ------------------------------------------------------KAEAEG 200
                                                                 KAE EG
Sbjct: 181 EKGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICINQRNNMITFSNLIQKAEEEG 240

[Close]

BLAST of CSPI06G22350.1 vs. ExPASy TrEMBL
Match: A0A6J1HVK8 (transcription factor bHLH160 OS=Cucurbita maxima OX=3661 GN=LOC111467064 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 9.4e-22
Identity = 108/288 (37.50%), Postives = 127/288 (44.10%), Query Frame = 0


Query: 1   MSLIPWEE-HILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEII 60
           M++ PWE  + L DE+NG EE + P                     K GE    L  E  
Sbjct: 1   MAVTPWESYYTLTDENNGEEETQLP---------------------KGGE---ALCGEKG 60

Query: 61  GSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARE 120
           GS+ E + LLGLEE+   I G   REN + FPP ++N  N EPS     NAKKEEHNARE
Sbjct: 61  GSMAEVAALLGLEED---IYGGFGREN-EAFPP-AMNA-NIEPS-----NAKKEEHNARE 120

Query: 121 RQRRLKLSHSYFSLRSLLPNARRS------------------------------------ 180
           RQRR++LS  YFSLRSLLPNARRS                                    
Sbjct: 121 RQRRMELSQLYFSLRSLLPNARRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQKMIK 180

Query: 181 ------------------------------------------------------KAEAEG 198
                                                                 KAE +G
Sbjct: 181 EKGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICIKQRNNMINFSNLIQKAEEDG 240

[Close]

BLAST of CSPI06G22350.1 vs. ExPASy TrEMBL
Match: A0A6J1DXT5 (transcription factor bHLH160 OS=Momordica charantia OX=3673 GN=LOC111025515 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-21
Identity = 93/229 (40.61%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 72  EENDHSID---GVLERENSKLFP--PTSIN------VHNEEPSNSNKANAKKEEHNARER 131
           EE+  +ID   G +EREN  LFP  P SIN       H  + SNSN ANAKKEEHNA+ER
Sbjct: 17  EEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEETHFSKASNSN-ANAKKEEHNAKER 76

Query: 132 QRRLKLSHSYFSLRSLLPNARRS------------------------------------- 191
           +RR+KLS +YFSLRSLLPN+RRS                                     
Sbjct: 77  ERRMKLSQTYFSLRSLLPNSRRSKKRWSSSRIIDKVIEYIPTVEKEIEKQKHKKEELIKA 136

Query: 192 ------------------------------------------------------KAEAEG 199
                                                                 KAEAEG
Sbjct: 137 KEMRNYNNNNERVTAAATVSTHPLSNSGEVIIQICINQKPAAENYCILFSSLIRKAEAEG 196

[Close]

BLAST of CSPI06G22350.1 vs. NCBI nr
Match: XP_031743831.1 (transcription factor bHLH160 [Cucumis sativus] >KAE8647334.1 hypothetical protein Csa_004052 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 2.0e-90
Identity = 199/298 (66.78%), Postives = 199/298 (66.78%), Query Frame = 0


Query: 1   MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG 60
           MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG
Sbjct: 1   MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG 60

Query: 61  SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARER 120
           SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARER
Sbjct: 61  SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARER 120

Query: 121 QRRLKLSHSYFSLRSLLPNARRS------------------------------------- 180
           QRRLKLSHSYFSLRSLLPNARRS                                     
Sbjct: 121 QRRLKLSHSYFSLRSLLPNARRSKKRWSAGTIIDKVVDYIPTLQKEIENMNQKKQKLIKA 180

Query: 181 ------------------------------------------------------------ 200
                                                                       
Sbjct: 181 KKNMSNNNERVSVSVEENEGLDQYYNNINPTVSIHQLCKGEVIIQICINPRNNNNKLSNL 240

[Close]

BLAST of CSPI06G22350.1 vs. NCBI nr
Match: XP_008449406.1 (PREDICTED: transcription factor bHLH100 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70
Identity = 176/304 (57.89%), Postives = 185/304 (60.86%), Query Frame = 0


Query: 1   MSLIPWEEHILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEIIG 60
           MSL PWEEHILIDEDNGIEE+E PLRNWSNNNGELEEI   I+ SKSGEEALLLPNEIIG
Sbjct: 1   MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEI---IRLSKSGEEALLLPNEIIG 60

Query: 61  -SLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARE 120
            SLVEDSTLLGL+E+D +I GVLERENSKLFPP SIN HNEEPSNSNK NAKKEEHNARE
Sbjct: 61  RSLVEDSTLLGLKESD-NIYGVLERENSKLFPPPSINAHNEEPSNSNKENAKKEEHNARE 120

Query: 121 RQRRLKLSHSYFSLRSLLPNARRS------------------------------------ 180
           RQRRL+LSHSYFSLRSLLPNARRS                                    
Sbjct: 121 RQRRLELSHSYFSLRSLLPNARRSKKRWSSGTIIDKVVDYIPTLQKEIEKMNQKKQNLIK 180

Query: 181 ------------------------------------------------------------ 200
                                                                       
Sbjct: 181 AKERIMSNNNAERVLVSVDENEGLDNQYYNNINPTVSIHQLCEGEVIIQICINPRNSNNN 240

[Close]

BLAST of CSPI06G22350.1 vs. NCBI nr
Match: XP_038888939.1 (transcription factor bHLH160 [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 6.2e-44
Identity = 138/292 (47.26%), Postives = 162/292 (55.48%), Query Frame = 0


Query: 1   MSLIPWEEHILIDEDNGIEEKENP------LRNWSNNNGELEEIFIDIQSSKSGEEALLL 60
           MSL  WEE+IL++E+NGI E ENP      L + SNNNGELEE     Q S++GE   LL
Sbjct: 1   MSLTQWEEYILMNENNGISEIENPELLGLSLSSLSNNNGELEE----TQLSENGE--ALL 60

Query: 61  PNEIIGSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEE 120
            +EI+GSL+E +TLLGLEEN   IDGVLE+E+SKL P + IN  N EPS +NKANAKKEE
Sbjct: 61  SDEILGSLMEAATLLGLEEN---IDGVLEKESSKLIPSSIINA-NIEPSIANKANAKKEE 120

Query: 121 HNARERQRRLKLSHSYFSLRSLLPNARRS------------------------------- 180
           HNARERQRR++LSHSYFSLRSLLPNARRS                               
Sbjct: 121 HNARERQRRMQLSHSYFSLRSLLPNARRSKKRWSSGTIIDKVVDYIPTLQKEIENMNQKK 180

Query: 181 ------------------------------------------------------------ 195
                                                                       
Sbjct: 181 QKLIKAKEMSNERVLLVDENEGLNNNPTVSIHQLCKGEVIIQICINQRNNNVIINFSNLI 240

[Close]

BLAST of CSPI06G22350.1 vs. NCBI nr
Match: XP_023553728.1 (transcription factor bHLH160 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-24
Identity = 110/290 (37.93%), Postives = 127/290 (43.79%), Query Frame = 0


Query: 1   MSLIPWEE-HILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEII 60
           M++ PWE  + L DE+NG E+   P                     K GE    L  EI 
Sbjct: 1   MAVTPWESYYTLTDENNGEEQTLLP---------------------KGGE---ALCGEIG 60

Query: 61  GSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARE 120
           GS+ E + LLGLEE+   I G L REN+   P  + N+   EPS     NAKKEEHNARE
Sbjct: 61  GSMGEVAALLGLEED---IYGGLGRENAAFPPAMNANI---EPS-----NAKKEEHNARE 120

Query: 121 RQRRLKLSHSYFSLRSLLPNARRS------------------------------------ 180
           RQRR++LS  YFSLRSLLPNARRS                                    
Sbjct: 121 RQRRMELSQLYFSLRSLLPNARRSKKRWSSTTIIDKVVDYIPTLQKEIENMKEKKQKMIK 180

Query: 181 ------------------------------------------------------KAEAEG 200
                                                                 KAE EG
Sbjct: 181 EKGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICINQRNNMIKFSNLIQKAEEEG 240

[Close]

BLAST of CSPI06G22350.1 vs. NCBI nr
Match: XP_022963582.1 (transcription factor bHLH160 [Cucurbita moschata])

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-23
Identity = 108/290 (37.24%), Postives = 126/290 (43.45%), Query Frame = 0


Query: 1   MSLIPWEE-HILIDEDNGIEEKENPLRNWSNNNGELEEIFIDIQSSKSGEEALLLPNEII 60
           M++ PWE  + L DE+NG E+   P                     K GE    L  EI 
Sbjct: 1   MAVAPWESYYTLTDENNGEEQTLLP---------------------KGGE---ALCGEIG 60

Query: 61  GSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSNKANAKKEEHNARE 120
           GS+ E + LLGLEE+   I G   REN+   P  + N+   EPS     NAKKEEHNARE
Sbjct: 61  GSMAEVAALLGLEED---IYGGFGRENAAFPPAMNANI---EPS-----NAKKEEHNARE 120

Query: 121 RQRRLKLSHSYFSLRSLLPNARRS------------------------------------ 180
           RQRR++LS  YFSLRSLLPNARRS                                    
Sbjct: 121 RQRRMELSQLYFSLRSLLPNARRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQKMIK 180

Query: 181 ------------------------------------------------------KAEAEG 200
                                                                 KAE EG
Sbjct: 181 EKGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICINQRNNMITFSNLIQKAEEEG 240

The following BLAST results are available for this feature:

BLAST of CSPI06G22350.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G22350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGG0	1.7e-103	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G417860 PE=4 S...	[more]
A0A1S3BLZ5	1.1e-70	57.89	transcription factor bHLH100 OS=Cucumis melo OX=3656 GN=LOC103491303 PE=4 SV=1	[more]
A0A6J1HFM3	1.0e-23	37.24	transcription factor bHLH160 OS=Cucurbita moschata OX=3662 GN=LOC111463877 PE=4 ...	[more]
A0A6J1HVK8	9.4e-22	37.50	transcription factor bHLH160 OS=Cucurbita maxima OX=3661 GN=LOC111467064 PE=4 SV...	[more]
A0A6J1DXT5	2.1e-21	40.61	transcription factor bHLH160 OS=Momordica charantia OX=3673 GN=LOC111025515 PE=4...	[more]

BLAST of CSPI06G22350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743831.1	2.0e-90	66.78	transcription factor bHLH160 [Cucumis sativus] >KAE8647334.1 hypothetical protei...	[more]
XP_008449406.1	2.3e-70	57.89	PREDICTED: transcription factor bHLH100 [Cucumis melo]	[more]
XP_038888939.1	6.2e-44	47.26	transcription factor bHLH160 [Benincasa hispida]	[more]
XP_023553728.1	7.2e-24	37.93	transcription factor bHLH160 [Cucurbita pepo subsp. pepo]	[more]
XP_022963582.1	2.1e-23	37.24	transcription factor bHLH160 [Cucurbita moschata]	[more]

BLAST of CSPI06G22350.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 101..196 e-value: 8.4E-7 score: 30.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 102..144
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 111..145 e-value: 1.8E-6 score: 27.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 110..190 score: 9.673615
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..119
None	No IPR available	PANTHER	PTHR13935:SF104	TRANSCRIPTION FACTOR BHLH160	coord: 87..144
None	No IPR available	PANTHER	PTHR13935:SF104	TRANSCRIPTION FACTOR BHLH160	coord: 145..199
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 87..144
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 145..199

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G22350	CSPI06G22350	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G22350.1.cds1	CSPI06G22350.1.cds1	CDS
CSPI06G22350.1.cds2	CSPI06G22350.1.cds2	CDS
CSPI06G22350.1.cds3	CSPI06G22350.1.cds3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G22350.1	CSPI06G22350.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity