CSPI06G19710.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI06G19710.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein SPIRAL1-like 1
Location	Chr6: 17720644 .. 17722666 (+)
Sequence length	790
RNA-Seq Expression	CSPI06G19710.1
Synteny	CSPI06G19710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGATCCCATCGTCGCCGGAAGGTTTGCTCCTCAAATTCATTCCTTGTCTCTTAGATCTTCTCTTTATCTTTCTTTTTTCCTCTTTTTAATCCACAATCTACCTTTGTTTTCCCCCCCATTTTCTTCTTCCTTCATCATCTACCATTGTTTTATCGCATTCCTTCTCTAGATCTACTACTTGATTCATTCTCTTTGGATTTCCTGTTTCTCCTTCCGGGTACCTCTCAATTGCTGAAACTATCAGATCTTGTTTCTTTCGCATCTTTGATTTTGTTCTTTTCTGACTGTGCTTAAGGGTTTTGCAGGATCTGTGGTATATGCCTACATTTTAACTGTTTCTTACTTTTTGGTCAAGTGATCGGTTTTTGAGATGGGTTTTTACGCTAGAACTTAGTACTCAGCTCAGCTGGGATATTCTTCTTGTGTTCCTGTGTGGGTTTTTTACTGTAAACTAATTAAATCAAATCACACCACTGTATGGGATTAGTATAACTGGTTGTTTTGTTTTGAAATTGATGCTATTGTTAATGGCTTCATGTGTCTTGTGTTCCGTTTTTCAATGTCTTGTTTGTCTTGGTATAATCTTTTTGTTTGGAGATCTATTGCTCTTACCATATCTTCTTTAATTTCATCACGACAGCTTTAGGCCTTGTCAGTATCTTCTTCATTTAGGTTGGGATTTATTTATTTATTTATTCAGCTGGCAGTCTTTACCACAGAAACAGGTCTTGTGGCTAGTTTTTCCAATATATATATATTATACCATCGTAAAAGAATATTATTATTATCTCAGACCTAACTGTTGAAAGTATGAGTCGTTAGATACCAAAGTTAGAAAAACCCATGAACTGTTACGACTAAGGGAATTAACATGAAAACATGGATCAAGTGTGATGTTCAAACATCAAGTTTGATGTTTTATTATAGTAGAGGCTTGAGTTTTACATTTTAACTCGAGATTTCTTTGGATACTTGATAGGACTATTTGCAATATATGAGATCCTTCAGCCATCGATTTTCACTCATTTATGTTCTCAGTCTTCTGATCTTTATTATTATTCTTTTTCCTGGTTGTAAGGCAAGCTTCTGAGTTGTGACATTTCAAAGAAACCGAAGTGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTCCAAGTGAAGCGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAAAACACTGGCAATTTCATAACGGTATAGCTACCCTTTATGAGTATTCTGCAATTTATTTGGTCTAATTTGACTGCTAGCATGTGGCCGATGATTGATACATATATAATCTTGGATTAGGGTCCATATTGCACCTATTTAGTTTAGCATACGATACGTCAATTGCAGTTTGCTTGGATTAGATGTTTACTGCACCTATTTATCTAGTCTCGTCCTCCTCTTTCTACCTATCTTTGAATTGTACGATCCAAGAGCAGTAGCCAAACGGGCATGTGCTAAAAGAAGATTGTACTGTAACTGATCTTTTGCCAAAATGGGAACCATGATATACCTTGATATGATATAATCAAAAAGGGGATTATAGTGATTTATTAGCTTTGTTTGTGGATGGTGCAGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAATCAGAACTAAATAGAGCTATTTGACGATCCATTTTATGTGAATTTTTATATCGTGTCGAAGGGGCAATGTTTTTTTTTCTTCTTTTCTTCCATCTGAAACGATACTATGGCAGGACGATATGCTTTTCGATGTAATGTGTAGATGCTTATGGTTTC

mRNA sequence

TCAGATCCCATCGTCGCCGGAAGGTTTGCTCCTCAAATTCATTCCTTGTCTCTTAGATCTTCTCTTTATCTTTCTTTTTTCCTCTTTTTAATCCACAATCTACCTTTGTTTTCCCCCCCATTTTCTTCTTCCTTCATCATCTACCATTGTTTTATCGCATTCCTTCTCTAGATCTACTACTTGATTCATTCTCTTTGGATTTCCTGTTTCTCCTTCCGGGCAAGCTTCTGAGTTGTGACATTTCAAAGAAACCGAAGTGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTCCAAGTGAAGCGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAAAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAATCAGAACTAAATAGAGCTATTTGACGATCCATTTTATGTGAATTTTTATATCGTGTCGAAGGGGCAATGTTTTTTTTTCTTCTTTTCTTCCATCTGAAACGATACTATGGCAGGACGATATGCTTTTCGATGTAATGTGTAGATGCTTATGGTTTC

Coding sequence (CDS)

ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTCCAAGTGAAGCGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAAAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA

Protein sequence

MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK*

Homology

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BLAST of CSPI06G19710.1 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-30
Identity = 76/116 (65.52%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVS GGGQSSLGYLFG G+AP          AP P SE   +S  A   P   A+   
Sbjct: 2   GRGVSVGGGQSSLGYLFGSGEAPKPAI----NNAPAPSSETLPIS--ADPSPKHVAAQTV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 119
           +++KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 62  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 70/114 (61.40%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAVN--------KTPAETESSAHAPPTQAAAANAV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 76/116 (65.52%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 4   RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAP-PPPSEAKTVSKPAVSKPAATASP-P 63
           RG S+GGGQSSLGYLFG  +AP   A      AP P P+ A      AV+ PA   SP  
Sbjct: 3   RGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAA---AVAAPAEKPSPAK 62

Query: 64  ADISKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           AD +KQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 63  ADATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGG 115

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 72/115 (62.61%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPA-VSKPAATASPP 62
           GRGVSSGGGQSSLGYLFG G+AP                  K+  KPA V KPA ++S  
Sbjct: 2   GRGVSSGGGQSSLGYLFGGGEAP------------------KSAEKPAPVQKPAPSSS-- 61

Query: 63  ADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           A+  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV AAPGGGSSLDYLF G
Sbjct: 62  AEKLKEIPAGIQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSG 96

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-25
Identity = 70/116 (60.34%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPP- 62
           GRGVSSGGGQSSLGYLFG G+   A   K     P   +E +T   P      A A+ P 
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAK-----PAAAAEKETTPAPVKKAAVAAAASPS 63

Query: 63  -ADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
            A+  K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 64  AAEKMKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114

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BLAST of CSPI06G19710.1 vs. ExPASy TrEMBL
Match: A0A0A0KFN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366520 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKT+SKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy TrEMBL
Match: A0A1S3BCR3 (protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy TrEMBL
Match: A0A5A7VC71 (Protein SPIRAL1-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00750 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy TrEMBL
Match: A0A6J1K972 (protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K VSKPA SKPAATASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of CSPI06G19710.1 vs. ExPASy TrEMBL
Match: A0A6J1HDG7 (protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K VSKPA SKPAATASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of CSPI06G19710.1 vs. NCBI nr
Match: XP_004144171.1 (protein SPIRAL1-like 1 [Cucumis sativus] >XP_004144172.1 protein SPIRAL1-like 1 [Cucumis sativus] >XP_031743708.1 protein SPIRAL1-like 1 [Cucumis sativus] >KGN47654.1 hypothetical protein Csa_018315 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 4.3e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKT+SKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CSPI06G19710.1 vs. NCBI nr
Match: XP_008445444.1 (PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445446.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445447.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >KAA0064770.1 protein SPIRAL1-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 221.5 bits (563), Expect = 4.0e-54
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CSPI06G19710.1 vs. NCBI nr
Match: XP_038886245.1 (protein SPIRAL1-like 1 [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 8.9e-54
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPLNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PAD++KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADVTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CSPI06G19710.1 vs. NCBI nr
Match: XP_022961880.1 (protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like 2 [Cucurbita maxima] >XP_023546068.1 protein SPIRAL1-like 2 [Cucurbita pepo subsp. pepo] >KAG6598640.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029577.1 Protein SPIRAL1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46
Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K VSKPA SKPAATASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of CSPI06G19710.1 vs. NCBI nr
Match: XP_023537697.1 (protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44
Identity = 104/128 (81.25%), Postives = 108/128 (84.38%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPP----------SEAKTVSKPAVS 62
           GRGVSSGGGQSSLGYLFG G++PNAGAPKGG+   P P          +EAK VSKPA S
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEAKPVSKPAAS 61

Query: 63  KPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDY 121
           KPAATASPP D  KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDY
Sbjct: 62  KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDY 121

[Close]

BLAST of CSPI06G19710.1 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-31
Identity = 76/116 (65.52%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVS GGGQSSLGYLFG G+AP          AP P SE   +S  A   P   A+   
Sbjct: 2   GRGVSVGGGQSSLGYLFGSGEAPKPAI----NNAPAPSSETLPIS--ADPSPKHVAAQTV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 119
           +++KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 62  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of CSPI06G19710.1 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 124.0 bits (310), Expect = 8.1e-29
Identity = 70/114 (61.40%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAVN--------KTPAETESSAHAPPTQAAAANAV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of CSPI06G19710.1 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 124.0 bits (310), Expect = 8.1e-29
Identity = 70/114 (61.40%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAVN--------KTPAETESSAHAPPTQAAAANAV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of CSPI06G19710.1 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 111.3 bits (277), Expect = 5.5e-25
Identity = 74/121 (61.16%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATA---- 62
           GRG S GGGQSSL YLFG GDAP   APK      P P+E+     P V+   ATA    
Sbjct: 2   GRGNSCGGGQSSLDYLFG-GDAP---APKPVPAPRPAPTESNNGPAPPVTAVTATALTTA 61

Query: 63  ---SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFG 117
                PA+++KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF 
Sbjct: 62  TTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFT 117

[Close]

BLAST of CSPI06G19710.1 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 111.3 bits (277), Expect = 5.5e-25
Identity = 74/121 (61.16%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATA---- 62
           GRG S GGGQSSL YLFG GDAP   APK      P P+E+     P V+   ATA    
Sbjct: 2   GRGNSCGGGQSSLDYLFG-GDAP---APKPVPAPRPAPTESNNGPAPPVTAVTATALTTA 61

Query: 63  ---SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFG 117
                PA+++KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF 
Sbjct: 62  TTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFT 117

The following BLAST results are available for this feature:

BLAST of CSPI06G19710.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H4F1	1.9e-30	65.52	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	1.1e-27	61.40	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q7Y1L9	2.2e-26	65.52	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
Q2QQ99	2.2e-26	62.61	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
Q2R0W8	3.1e-25	60.34	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]

BLAST of CSPI06G19710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFN2	2.1e-56	99.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366520 PE=3 SV=1	[more]
A0A1S3BCR3	1.9e-54	96.67	protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1	[more]
A0A5A7VC71	1.9e-54	96.67	Protein SPIRAL1-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8...	[more]
A0A6J1K972	1.1e-46	88.98	protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1	[more]
A0A6J1HDG7	1.1e-46	88.98	protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1	[more]

BLAST of CSPI06G19710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144171.1	4.3e-56	99.17	protein SPIRAL1-like 1 [Cucumis sativus] >XP_004144172.1 protein SPIRAL1-like 1 ...	[more]
XP_008445444.1	4.0e-54	96.67	PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445446.1 PREDICTED: prot...	[more]
XP_038886245.1	8.9e-54	95.83	protein SPIRAL1-like 1 [Benincasa hispida]	[more]
XP_022961880.1	2.4e-46	88.98	protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like...	[more]
XP_023537697.1	1.7e-44	81.25	protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G19710.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	1.3e-31	65.52	SPIRAL1-like1	[more]
AT1G69230.1	8.1e-29	61.40	SPIRAL1-like2	[more]
AT1G69230.2	8.1e-29	61.40	SPIRAL1-like2	[more]
AT2G03680.1	5.5e-25	61.16	spiral1	[more]
AT2G03680.2	5.5e-25	61.16	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..95
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 3..118
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 3..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G19710	CSPI06G19710	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G19710.1.utr5p1	CSPI06G19710.1.utr5p1	five_prime_UTR
CSPI06G19710.1.utr5p2	CSPI06G19710.1.utr5p2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G19710.1.cds2	CSPI06G19710.1.cds2	CDS
CSPI06G19710.1.cds3	CSPI06G19710.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G19710.1.utr3p1	CSPI06G19710.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G19710.1	CSPI06G19710.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0000166	nucleotide binding