CSPI06G09610.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI06G09610.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr6: 8212099 .. 8213268 (+)
Sequence length	1170
RNA-Seq Expression	CSPI06G09610.1
Synteny	CSPI06G09610.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGGATACATAACTTGGGTACCCTAGTTTAGAGAATACTTTCTCACCTACCCTAGGTTGCGCGTTATTTTTTAAAATAGCAGGAATTGGAGATGAAGAGAAAAAATGAAAAAGAAAAAGAAAGAAAGAGAAAGGGCCCCACGATAATCATCCCACAACCCAACCCCCCACCGCTAAGCGAATAAAACAGGCTGTGATCCAGCTGTTGTTTTTACTTACATTCACAAAATACACTCTCTCTTCTCATTTTCATTTCCCAGTTCCCACCCTTTCCTCTTCTCCATTTCCCTCCTCCGGCCCTCATTCCACCACCATGTCTTCCGTCGTCCACACCTTCACCAAGACTCGCTCCTTTCTCCCCTCCAGACCCCTCCCCGATGCACTCCCCCTCTCTCACACCGACTCCCCCTCCGACCAAACCCTCCGCCGCCGCCTCTCCTCTCTTTCCCTCCGCATTCAGCCAATCTCCTCCCCTGCCACTGCTTGGGCCATTCGAAAATCCAAGTCCATGTCCTCATTCGGAGATCTCGCCGGCTCCTCCGTCAGAAAGTGGTGGGACTGGGGCTGGGCTTGGATCCTTTCTCGCAAACCTATCTTCGCTAAAGATCTGGAGATGAACGAAGAGGAATCCAAAATCCTTGGATCTCAAAACAGAGGTAGTTGGAAACACGTCTTCTTCAAGTTCAGATCCGAAATCAGAAAGCTCATTGGCTCTGATGTTGCCCTCCCCCAAACTACCCCCAACTATCGATCCTTCAATTTCCCCAACAACAATAGCGGAATCAGAACCTAATTAATCGATCTCTCATCCTTCTTTGCCCTTCTTCCTCCATTGATTTTGTATCCAATTGTTCTTTTTGTATCACGTAATATCATGCCGATGAATTCGAAGATCGATTAGGGTTCCAATTTGACGATGCCGCATTGCTCTGGATCCAACCAAAATTAGGTGGTATAGAACAACTTAAATAGCTTAGGGATATGGTTGTCATTATTTAGATGCTTATATTTTTACGTGCTATTTTTTTTTATAATTTTTTTTTTTTTACTTTGGTGGATTTAATTTTGTACAACGATGCTGTTATTTTTTCTGTATTGTATTGTATTTTACTTTCAATTCTTTTTCTTTTTTACTACGGAGGGTTAAATGTAAAAATATTGTTGTATTA

mRNA sequence

GGAGGGATACATAACTTGGGTACCCTAGTTTAGAGAATACTTTCTCACCTACCCTAGGTTGCGCGTTATTTTTTAAAATAGCAGGAATTGGAGATGAAGAGAAAAAATGAAAAAGAAAAAGAAAGAAAGAGAAAGGGCCCCACGATAATCATCCCACAACCCAACCCCCCACCGCTAAGCGAATAAAACAGGCTGTGATCCAGCTGTTGTTTTTACTTACATTCACAAAATACACTCTCTCTTCTCATTTTCATTTCCCAGTTCCCACCCTTTCCTCTTCTCCATTTCCCTCCTCCGGCCCTCATTCCACCACCATGTCTTCCGTCGTCCACACCTTCACCAAGACTCGCTCCTTTCTCCCCTCCAGACCCCTCCCCGATGCACTCCCCCTCTCTCACACCGACTCCCCCTCCGACCAAACCCTCCGCCGCCGCCTCTCCTCTCTTTCCCTCCGCATTCAGCCAATCTCCTCCCCTGCCACTGCTTGGGCCATTCGAAAATCCAAGTCCATGTCCTCATTCGGAGATCTCGCCGGCTCCTCCGTCAGAAAGTGGTGGGACTGGGGCTGGGCTTGGATCCTTTCTCGCAAACCTATCTTCGCTAAAGATCTGGAGATGAACGAAGAGGAATCCAAAATCCTTGGATCTCAAAACAGAGGTAGTTGGAAACACGTCTTCTTCAAGTTCAGATCCGAAATCAGAAAGCTCATTGGCTCTGATGTTGCCCTCCCCCAAACTACCCCCAACTATCGATCCTTCAATTTCCCCAACAACAATAGCGGAATCAGAACCTAATTAATCGATCTCTCATCCTTCTTTGCCCTTCTTCCTCCATTGATTTTGTATCCAATTGTTCTTTTTGTATCACGTAATATCATGCCGATGAATTCGAAGATCGATTAGGGTTCCAATTTGACGATGCCGCATTGCTCTGGATCCAACCAAAATTAGGTGGTATAGAACAACTTAAATAGCTTAGGGATATGGTTGTCATTATTTAGATGCTTATATTTTTACGTGCTATTTTTTTTTATAATTTTTTTTTTTTTACTTTGGTGGATTTAATTTTGTACAACGATGCTGTTATTTTTTCTGTATTGTATTGTATTTTACTTTCAATTCTTTTTCTTTTTTACTACGGAGGGTTAAATGTAAAAATATTGTTGTATTA

Coding sequence (CDS)

ATGTCTTCCGTCGTCCACACCTTCACCAAGACTCGCTCCTTTCTCCCCTCCAGACCCCTCCCCGATGCACTCCCCCTCTCTCACACCGACTCCCCCTCCGACCAAACCCTCCGCCGCCGCCTCTCCTCTCTTTCCCTCCGCATTCAGCCAATCTCCTCCCCTGCCACTGCTTGGGCCATTCGAAAATCCAAGTCCATGTCCTCATTCGGAGATCTCGCCGGCTCCTCCGTCAGAAAGTGGTGGGACTGGGGCTGGGCTTGGATCCTTTCTCGCAAACCTATCTTCGCTAAAGATCTGGAGATGAACGAAGAGGAATCCAAAATCCTTGGATCTCAAAACAGAGGTAGTTGGAAACACGTCTTCTTCAAGTTCAGATCCGAAATCAGAAAGCTCATTGGCTCTGATGTTGCCCTCCCCCAAACTACCCCCAACTATCGATCCTTCAATTTCCCCAACAACAATAGCGGAATCAGAACCTAA

Protein sequence

MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAIRKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHVFFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT*

Homology

[Close]

BLAST of CSPI06G09610.1 vs. ExPASy TrEMBL
Match: A0A0A0KE14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117780 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.4e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI
Sbjct: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of CSPI06G09610.1 vs. ExPASy TrEMBL
Match: A0A5A7U301 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00710 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 156/159 (98.11%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSR LPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 146 MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 205

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV
Sbjct: 206 RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 265

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 266 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 304

[Close]

BLAST of CSPI06G09610.1 vs. ExPASy TrEMBL
Match: A0A5D3CRS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00020 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.0e-83
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSR LPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 146 MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 205

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKI+GSQNRGSWKHV
Sbjct: 206 RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKIIGSQNRGSWKHV 265

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 266 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 304

[Close]

BLAST of CSPI06G09610.1 vs. ExPASy TrEMBL
Match: A0A1S3BJ25 (uncharacterized protein LOC103490448 OS=Cucumis melo OX=3656 GN=LOC103490448 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.0e-83
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSR LPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 1   MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 60

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKI+GSQNRGSWKHV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKIIGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of CSPI06G09610.1 vs. ExPASy TrEMBL
Match: A0A6J1JBW3 (uncharacterized protein LOC111484356 OS=Cucurbita maxima OX=3661 GN=LOC111484356 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MS+VVHTF K R+FLP+RPLPDALP+SHTDS ++QTLRRRLSSLSLRIQPISSPATAWAI
Sbjct: 1   MSAVVHTFQKPRTFLPARPLPDALPVSHTDSAAEQTLRRRLSSLSLRIQPISSPATAWAI 60

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSS GDLAGSSVRKWWDWGWAWILSRKPIFA DLEMNEEESKILGSQNRGSW+HV
Sbjct: 61  RKSKSMSSIGDLAGSSVRKWWDWGWAWILSRKPIFATDLEMNEEESKILGSQNRGSWRHV 120

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDV LPQTT NY+SFNF +NN GIRT
Sbjct: 121 FFKFRSEIRKLIGSDVGLPQTTCNYKSFNF-SNNGGIRT 158

[Close]

BLAST of CSPI06G09610.1 vs. NCBI nr
Match: KAE8646820.1 (hypothetical protein Csa_005750 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI
Sbjct: 39  MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 98

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV
Sbjct: 99  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 158

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 159 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 197

[Close]

BLAST of CSPI06G09610.1 vs. NCBI nr
Match: XP_004151646.1 (uncharacterized protein LOC101213314 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI
Sbjct: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of CSPI06G09610.1 vs. NCBI nr
Match: KAA0047819.1 (uncharacterized protein E6C27_scaffold133G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.4e-83
Identity = 156/159 (98.11%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSR LPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 146 MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 205

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV
Sbjct: 206 RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 265

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 266 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 304

[Close]

BLAST of CSPI06G09610.1 vs. NCBI nr
Match: XP_008448164.1 (PREDICTED: uncharacterized protein LOC103490448 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 4.2e-83
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSR LPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 1   MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 60

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKI+GSQNRGSWKHV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKIIGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of CSPI06G09610.1 vs. NCBI nr
Match: TYK14617.1 (uncharacterized protein E5676_scaffold1275G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 4.2e-83
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSR LPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 146 MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 205

Query: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120
           RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKI+GSQNRGSWKHV
Sbjct: 206 RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKIIGSQNRGSWKHV 265

Query: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 160
           FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT
Sbjct: 266 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 304

[Close]

BLAST of CSPI06G09610.1 vs. TAIR 10
Match: AT4G35320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 3.7e-29
Identity = 71/142 (50.00%), Postives = 97/142 (68.31%), Query Frame = 0


Query: 1   MSSVVHTF-TKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWA 60
           MSS++ T   +  + LP    P+A   +  D P    +RRRLSSLSL +      A A  
Sbjct: 1   MSSMMETLQIRKPTSLPVSQRPNAAATA-DDEPG--LIRRRLSSLSLNLSN-QPAAIAAR 60

Query: 61  IRKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKH 120
             +SKS+S+ G+ AGSSV++WW+WGW+WILSRKPIF +DLE+N++E+K +GSQNRGS  H
Sbjct: 61  FPRSKSVSAMGEQAGSSVKEWWEWGWSWILSRKPIFIRDLELNKDEAKSIGSQNRGSIMH 120

Query: 121 VFFKFRSEIRKLIG--SDVALP 140
           VFFK RS+IR  +G  S+ +LP
Sbjct: 121 VFFKLRSQIRNFMGPSSEDSLP 138

[Close]

BLAST of CSPI06G09610.1 vs. TAIR 10
Match: AT2G17300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 60/114 (52.63%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 21  PDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAIRKSKSMSSFGDLAGSSVRKW 80
           P +LP+S T +     LRRRLSSLSL +   + P+T   + +SKS+S  G+  GSSV++W
Sbjct: 14  PTSLPISSTTTDEPGLLRRRLSSLSLNLSR-NQPST---VSRSKSVSDMGEQGGSSVKEW 73

Query: 81  WDWGWAWILSRK-PIFAKDLEMNEEESK-ILGSQNRGSWKHVFFKFRSEIRKLI 133
           W+W W+WIL +K PIF  DLE+N+ E+K  LG+Q RGS+ HVFFK RSEIR+L+
Sbjct: 74  WEWSWSWILLKKLPIFFTDLEVNKNETKSSLGNQQRGSFIHVFFKLRSEIRRLL 123

The following BLAST results are available for this feature:

BLAST of CSPI06G09610.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G09610.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE14	7.4e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117780 PE=4 SV=1	[more]
A0A5A7U301	1.2e-83	98.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CRS5	2.0e-83	97.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BJ25	2.0e-83	97.48	uncharacterized protein LOC103490448 OS=Cucumis melo OX=3656 GN=LOC103490448 PE=...	[more]
A0A6J1JBW3	2.2e-74	88.68	uncharacterized protein LOC111484356 OS=Cucurbita maxima OX=3661 GN=LOC111484356...	[more]

BLAST of CSPI06G09610.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646820.1	1.5e-85	100.00	hypothetical protein Csa_005750 [Cucumis sativus]	[more]
XP_004151646.1	1.5e-85	100.00	uncharacterized protein LOC101213314 [Cucumis sativus]	[more]
KAA0047819.1	2.4e-83	98.11	uncharacterized protein E6C27_scaffold133G00710 [Cucumis melo var. makuwa]	[more]
XP_008448164.1	4.2e-83	97.48	PREDICTED: uncharacterized protein LOC103490448 [Cucumis melo]	[more]
TYK14617.1	4.2e-83	97.48	uncharacterized protein E5676_scaffold1275G00020 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI06G09610.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35320.1	3.7e-29	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G17300.1	1.9e-25	52.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35714:SF1	OS02G0715300 PROTEIN	coord: 1..154
None	No IPR available	PANTHER	PTHR35714	OS02G0715300 PROTEIN	coord: 1..154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G09610	CSPI06G09610	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G09610.1.utr5p1	CSPI06G09610.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G09610.1.cds1	CSPI06G09610.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G09610.1.utr3p1	CSPI06G09610.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G09610.1	CSPI06G09610.1-protein	polypeptide