CSPI06G01330.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI06G01330.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ras-related protein Rab2BV
Location	Chr6: 955295 .. 957041 (-)
Sequence length	994
RNA-Seq Expression	CSPI06G01330.1
Synteny	CSPI06G01330.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCCTCTTCGTTCTTAATCGTTATGATGTTGTTGGATCTGGCAGGTGTTAGGCTCGGTATTTGATTAGGATTAATTTTGTTCAAATGGCTTACAAGGTGGATCATGAATACGATTATCTCTTCAAGATTGTCTTGATCGGTGATTCTGGAGTTGGAAAATCCAATATTCTCTCCAGGTTTACGCGTAACGAATTCTGTTTGGAATCCAAGTCTACCATTGGTGTTGAATTCGCTACACGGACTTTGCAGGTTGTTTACGCTACCCTCCATTTTTATATTCCTTTTTTTTTTAATTTATTTATTAAAGTCATTTCTCCATTTAGATCGTTGGTCTTGTTCTTACGTTACTTAATTAACAATTTCATGAGTTTGATTCTGATGGGTTGAGAATCCTTAATTAGGATAATCCGTTTAAATTAGACCATTCATATTGTAATTGTTATCAATAGGCCTGTATTGATCATTTTCTTCGAGTTTGAATCTGACTTTAGGAAGGAGGGTATGAATATTGACTCGCATATTTCTTCCTTGCCAATTTGTTTATGAACTGATTTAAGTCAAAAGGCCAAATTTGACCATTCATGTGGCATCATATATAATATTAAATTTATATTTATCCATCTTTTTAATCTATTGGAAAAGAGGGAGTGGTTCAAAAACTACTTTGTTCAAACTCTGTAATAATAATGCATACTGTTTCCAGTTTTCTGAATATTTCAAAACTCACACTTGAAGGAAAAATATTAGACCTGATAGACCATGTTAATTAGAGGCTATAAATTTTTATAAATCCTAACAAGTTGAAATCAATGTTAACGAAAAAAATGGAAGTAATTAATATTGCAAAAGGTTTTAAAGGTTTTAACACAAGACCTCCTTGACACTCCTATACTGTGTTAAACCACTCATTTGCTATAAAACTAAAGTTAGAGGTGAAGGCATATTTGATGTTACACTTTAACATATTAAAGTAGATGATTGTTAAGAATTGGTCTGAGACAGGTAGAGGGGAAGACAGTGAAGGCTCAAATATGGGACACAGCAGGACAAGAGAGATACCGAGCCATTACAAGTGCTTATTACAGGGGAGCAGTTGGTGCACTTTTGGTTTATGATATAACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGTGAGCTGAGAGACCATGCTGATTCCAATATCGTGATCATGATGGCCGGAAACAAGGCGGACCTTAACCACCTCCGGGCAGTTTCCGCCGAAGATGCTCAGGTTTTGGCAGAAAAAGAAGGGTTGTCGTTCCTTGAGACCTCAGCTTTGGAGGCCTTGAATGTTGAGAAGGCTTTCCAGACCATTTTGCTTGACATTTATCATATCATTAGCAAGAAAGCTTTGGCTGCTCAAGAAGCCACCTCCAACCCCGGCCTCCCTCACGGCACGACCATCAACGTCGCGAATATCTCGGGCAATTACAACAAGAGAAGTTGTTGCTCTAATTGATCATGTGATATGATGATTTTGTGGGACAAGATCAGATCAACCAAAAAAAGAAAAAAAAAAAGGAGAGAGAAAAAAGGTAAAAAGAGTTTTTGTTGTAAAAGGCAAGATGAATAGAGAGATACCCTTTTCAATATATATTTTTTTTCATAGATGGAAAAAGAGAGGAGAGAGAGAATCAAAGTAAGCTCAGACTGCTTCTTCCATTTTTATCTAAACTAATTCTGTTTGTTTCAATGAAAAAATGAGACATTTTTCAT

mRNA sequence

CCTTCCTCTTCGTTCTTAATCGTTATGATGTTGTTGGATCTGGCAGGTGTTAGGCTCGGTATTTGATTAGGATTAATTTTGTTCAAATGGCTTACAAGGTGGATCATGAATACGATTATCTCTTCAAGATTGTCTTGATCGGTGATTCTGGAGTTGGAAAATCCAATATTCTCTCCAGGTTTACGCGTAACGAATTCTGTTTGGAATCCAAGTCTACCATTGGTGTTGAATTCGCTACACGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCTCAAATATGGGACACAGCAGGACAAGAGAGATACCGAGCCATTACAAGTGCTTATTACAGGGGAGCAGTTGGTGCACTTTTGGTTTATGATATAACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGTGAGCTGAGAGACCATGCTGATTCCAATATCGTGATCATGATGGCCGGAAACAAGGCGGACCTTAACCACCTCCGGGCAGTTTCCGCCGAAGATGCTCAGGTTTTGGCAGAAAAAGAAGGGTTGTCGTTCCTTGAGACCTCAGCTTTGGAGGCCTTGAATGTTGAGAAGGCTTTCCAGACCATTTTGCTTGACATTTATCATATCATTAGCAAGAAAGCTTTGGCTGCTCAAGAAGCCACCTCCAACCCCGGCCTCCCTCACGGCACGACCATCAACGTCGCGAATATCTCGGGCAATTACAACAAGAGAAGTTGTTGCTCTAATTGATCATGTGATATGATGATTTTGTGGGACAAGATCAGATCAACCAAAAAAAGAAAAAAAAAAAGGAGAGAGAAAAAAGGTAAAAAGAGTTTTTGTTGTAAAAGGCAAGATGAATAGAGAGATACCCTTTTCAATATATATTTTTTTTCATAGATGGAAAAAGAGAGGAGAGAGAGAATCAAAGTAAGCTCAGACTGCTTCTTCCATTTTTATCTAAACTAATTCTGTTTGTTTCAATGAAAAAATGAGACATTTTTCAT

Coding sequence (CDS)

ATGGCTTACAAGGTGGATCATGAATACGATTATCTCTTCAAGATTGTCTTGATCGGTGATTCTGGAGTTGGAAAATCCAATATTCTCTCCAGGTTTACGCGTAACGAATTCTGTTTGGAATCCAAGTCTACCATTGGTGTTGAATTCGCTACACGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCTCAAATATGGGACACAGCAGGACAAGAGAGATACCGAGCCATTACAAGTGCTTATTACAGGGGAGCAGTTGGTGCACTTTTGGTTTATGATATAACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGTGAGCTGAGAGACCATGCTGATTCCAATATCGTGATCATGATGGCCGGAAACAAGGCGGACCTTAACCACCTCCGGGCAGTTTCCGCCGAAGATGCTCAGGTTTTGGCAGAAAAAGAAGGGTTGTCGTTCCTTGAGACCTCAGCTTTGGAGGCCTTGAATGTTGAGAAGGCTTTCCAGACCATTTTGCTTGACATTTATCATATCATTAGCAAGAAAGCTTTGGCTGCTCAAGAAGCCACCTCCAACCCCGGCCTCCCTCACGGCACGACCATCAACGTCGCGAATATCTCGGGCAATTACAACAAGAGAAGTTGTTGCTCTAATTGA

Protein sequence

MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN*

Homology

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BLAST of CSPI06G01330.1 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-101
Identity = 194/216 (89.81%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DL HLRAVS ED Q LAEKEGLSFLETSALEA+N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 ALAAQEATSN-PGLPHGTTINVANISGNYNKRSCCS 216
           ALAAQEA+SN PG   GTTINVA+ S N  +RSCCS
Sbjct: 181 ALAAQEASSNLPG--QGTTINVADASAN-QRRSCCS 213

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BLAST of CSPI06G01330.1 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.8e-101
Identity = 189/216 (87.50%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLRAVS +D   L+EKEGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 ALAAQEATSNPGLP-HGTTINVANISGNYNKRSCCS 216
           ALAAQEAT+   +P  GTTINVA+ SGN  K+ CCS
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGN-TKKGCCS 215

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BLAST of CSPI06G01330.1 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 185/216 (85.65%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA +VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALL YDITKRQTFDNVQRWLRELRDH DSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           ++AGNK+DL HLRAVS +D Q L +KEGLSFLETSALEALNV+KAFQTIL DIYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 181 ALAAQEATSNPGLP-HGTTINVANISGNYNKRSCCS 216
           ALAAQEA ++  LP  GTTINV++ S N  KR CCS
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANV-KRGCCS 215

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BLAST of CSPI06G01330.1 vs. ExPASy Swiss-Prot
Match: Q9FIF9 (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 9.3e-97
Identity = 185/217 (85.25%), Postives = 197/217 (90.78%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLR+V+ ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAQE-ATSNPGLP-HGTTINVANISGNYNKRSCCS 216
           ALAAQE A +N  +P  GTTINV + SG   KR CCS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCS 216

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BLAST of CSPI06G01330.1 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 353.6 bits (906), Expect = 1.6e-96
Identity = 186/218 (85.32%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED Q LAEKEGLSFLETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAQE-ATSNPGLP-HGTTINVANISGNYNKRSCCSN 217
           ALAAQE A +N  +P  GTTINV + SG   KR+CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGG-AKRACCSS 217

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BLAST of CSPI06G01330.1 vs. ExPASy TrEMBL
Match: A0A0A0KBH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008830 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. ExPASy TrEMBL
Match: A0A5D3DL31 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001070 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQ+LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQLLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEATSNPGLPHGTTINVAN+SGNY+KRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANLSGNYSKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. ExPASy TrEMBL
Match: A0A1S3B3E1 (ras-related protein Rab2BV OS=Cucumis melo OX=3656 GN=LOC103485535 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQ+LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQLLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEATSNPGLPHGTTINVAN+SGNY+KRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANLSGNYSKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. ExPASy TrEMBL
Match: A0A6J1FEC9 (ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111444743 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PGLPHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. ExPASy TrEMBL
Match: A0A6J1K193 (ras-related protein Rab2BV-like OS=Cucurbita maxima OX=3661 GN=LOC111489726 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.9e-114
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PG+PHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. NCBI nr
Match: XP_004138445.1 (ras-related protein Rab2BV [Cucumis sativus] >KGN45752.1 hypothetical protein Csa_005266 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. NCBI nr
Match: XP_008441408.1 (PREDICTED: ras-related protein Rab2BV [Cucumis melo] >KAA0041459.1 ras-related protein Rab2BV [Cucumis melo var. makuwa] >TYK24333.1 ras-related protein Rab2BV [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQ+LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQLLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEATSNPGLPHGTTINVAN+SGNY+KRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANLSGNYSKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. NCBI nr
Match: XP_022938534.1 (ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023549819.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >XP_023549820.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >KAG6578429.1 Ras-related protein Rab2BV, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015992.1 Ras-related protein Rab2BV [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421.4 bits (1082), Expect = 4.7e-114
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PGLPHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. NCBI nr
Match: XP_022993834.1 (ras-related protein Rab2BV-like [Cucurbita maxima] >XP_022993835.1 ras-related protein Rab2BV-like [Cucurbita maxima])

HSP 1 Score: 420.6 bits (1080), Expect = 8.1e-114
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PG+PHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. NCBI nr
Match: XP_022134462.1 (ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-related protein Rab2BV-like [Momordica charantia])

HSP 1 Score: 420.6 bits (1080), Expect = 8.1e-114
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PGLPHGTTINVAN+SGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANLSGNYNKRSCCSN 216

[Close]

BLAST of CSPI06G01330.1 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 354.4 bits (908), Expect = 6.6e-98
Identity = 185/217 (85.25%), Postives = 197/217 (90.78%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLR+V+ ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAQE-ATSNPGLP-HGTTINVANISGNYNKRSCCS 216
           ALAAQE A +N  +P  GTTINV + SG   KR CCS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCS 216

[Close]

BLAST of CSPI06G01330.1 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-97
Identity = 186/218 (85.32%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED Q LAEKEGLSFLETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAQE-ATSNPGLP-HGTTINVANISGNYNKRSCCSN 217
           ALAAQE A +N  +P  GTTINV + SG   KR+CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGG-AKRACCSS 217

[Close]

BLAST of CSPI06G01330.1 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-97
Identity = 183/216 (84.72%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA ++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED + LAEKEGLSFLETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAQEATSN-PGLPHGTTINVANISGNYNKRSCCS 216
           ALAAQEA  N PG   GT IN+++ S   N++ CCS
Sbjct: 181 ALAAQEAAGNLPG--QGTAINISDSSAT-NRKGCCS 213

[Close]

BLAST of CSPI06G01330.1 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 332.0 bits (850), Expect = 3.5e-91
Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           M+ GNK DL HLRAV+ EDAQ  AEKEGLSF+ETSALEALNVEKAFQTIL ++Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 217
           ++++ + T+N  +  G TI+VA  S +  K+ CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of CSPI06G01330.1 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-78
Identity = 148/217 (68.20%), Postives = 172/217 (79.26%), Query Frame = 0


Query: 2   AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
           AY+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV+RWL+ELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 MAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
             GNKADL HLRAVS EDA+  AE+E   F+ETSALE++NVE AF  +L  IY ++S+KA
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LAAQEATSNPGLPHGTTINVANIS--GNYNKRSCCSN 217
           L   +  +   LP G TINV +        K  CCSN
Sbjct: 183 LDIGDDPA--ALPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of CSPI06G01330.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39434	2.1e-101	89.81	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q40193	2.8e-101	87.50	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q40523	1.1e-97	85.65	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]
Q9FIF9	9.3e-97	85.25	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
Q96283	1.6e-96	85.32	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]

BLAST of CSPI06G01330.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBH8	1.2e-115	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008830 PE=4 SV=1	[more]
A0A5D3DL31	1.8e-114	98.61	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B3E1	1.8e-114	98.61	ras-related protein Rab2BV OS=Cucumis melo OX=3656 GN=LOC103485535 PE=4 SV=1	[more]
A0A6J1FEC9	2.3e-114	99.07	ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111444743 PE...	[more]
A0A6J1K193	3.9e-114	98.61	ras-related protein Rab2BV-like OS=Cucurbita maxima OX=3661 GN=LOC111489726 PE=4...	[more]

BLAST of CSPI06G01330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138445.1	2.5e-115	100.00	ras-related protein Rab2BV [Cucumis sativus] >KGN45752.1 hypothetical protein Cs...	[more]
XP_008441408.1	3.6e-114	98.61	PREDICTED: ras-related protein Rab2BV [Cucumis melo] >KAA0041459.1 ras-related p...	[more]
XP_022938534.1	4.7e-114	99.07	ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related...	[more]
XP_022993834.1	8.1e-114	98.61	ras-related protein Rab2BV-like [Cucurbita maxima] >XP_022993835.1 ras-related p...	[more]
XP_022134462.1	8.1e-114	98.61	ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-relate...	[more]

BLAST of CSPI06G01330.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59150.1	6.6e-98	85.25	RAB GTPase homolog A2D	[more]
AT3G46830.1	1.1e-97	85.32	RAB GTPase homolog A2C	[more]
AT1G07410.1	1.9e-97	84.72	RAB GTPase homolog A2B	[more]
AT1G09630.1	3.5e-91	76.39	RAB GTPase 11C	[more]
AT5G60860.1	1.2e-78	68.20	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 54..76 score: 53.54 coord: 13..34 score: 52.05 coord: 151..173 score: 42.31 coord: 36..52 score: 36.23 coord: 116..129 score: 44.56
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..213 e-value: 3.2E-9 score: 46.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 1.4E-27 score: 107.6
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..185 e-value: 0.0071 score: -2.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 1.1E-111 score: 387.0
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..216
None	No IPR available	PANTHER	PTHR47978:SF7	RAS-RELATED PROTEIN RAB11C-LIKE	coord: 1..216
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..214 score: 35.493591
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..174 score: 8.925133
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 4.85003E-127 score: 353.403
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 1.3E-10 score: 16.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..173 e-value: 1.2E-60 score: 203.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..205 score: 16.153479
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..169 e-value: 1.3E-39 score: 133.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..214 e-value: 2.2E-72 score: 244.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..178

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G01330	CSPI06G01330	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G01330.1.utr3p1	CSPI06G01330.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G01330.1.cds2	CSPI06G01330.1.cds2	CDS
CSPI06G01330.1.cds1	CSPI06G01330.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G01330.1.utr5p1	CSPI06G01330.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G01330.1	CSPI06G01330.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding