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CSPI05G13310.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGGCCCTTCCCCACCTCCCATTAAAATACATACATACAAGGCTGCGGTACAATCTTTTCCCAACAAGCCGCCCAAACATGAAGTGGTCAAGCCAATTCCCAACAGATCCGATCCCAGGTCTTCCCCACACTCTAATTGGAAATCAATGGTTGTGATACAACGACAACTCCAAGACTCTTGGCTGGAAATTAGTGAAGCTATACAATCTACGATTTCATCACGATGAACAATCAATCCCTTCCTTGATGACAAGGCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGATAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAACTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACATATGCGGTGGTGAGGGAATCCACCTTGCCGGCGGCAGCATCTATGGGAATTAAATCGGCAGTTACAAATCTAGGGCATTCACACGATAAAAAAGGGAAAATCCTGTTGTTTCCTTAAAAACACAGCTGGCTCACCAAATTCCAATGATTCTCAGGAATTTAACTTCTCTGCAGACCTTCCTAATCTGGTGGCAAATCTAGAGCATCACACGATAAAAAAGGACAAAATCCTATTGTTTCCTTAACAACACAGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTTTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCGTGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCCCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCAATATAA ATGACTGGCCCTTCCCCACCTCCCATTAAAATACATACATACAAGGCTGCGGTACAATCTTTTCCCAACAAGCCGCCCAAACATGAAGTGGTCAAGCCAATTCCCAACAGATCCGATCCCAGGTCTTCCCCACACTCTAATTGGAAATCAATGGCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGATAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAACTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACATATGCGGTGGTGAGGGAATCCACCTTGCCGGCGGCAGCATCTATGGGAATTAAATCGGCACTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTTTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCGTGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCCCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCAATATAA ATGACTGGCCCTTCCCCACCTCCCATTAAAATACATACATACAAGGCTGCGGTACAATCTTTTCCCAACAAGCCGCCCAAACATGAAGTGGTCAAGCCAATTCCCAACAGATCCGATCCCAGGTCTTCCCCACACTCTAATTGGAAATCAATGGCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGATAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAACTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACATATGCGGTGGTGAGGGAATCCACCTTGCCGGCGGCAGCATCTATGGGAATTAAATCGGCACTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTTTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCGTGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCCCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCAATATAA MTGPSPPPIKIHTYKAAVQSFPNKPPKHEVVKPIPNRSDPRSSPHSNWKSMALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTDRGLNFKGARLKIRPNSYGLIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAADTYAVVRESTLPAAASMGIKSALTHQKSRDSRQFEFSANFPNPVAINIPCEQIPSHFPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVATPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLPITILPPVPTDLHNPI* Homology
BLAST of CSPI05G13310.1 vs. ExPASy TrEMBL
Match: A0A0A0KPT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G314850 PE=4 SV=1) HSP 1 Score: 699.1 bits (1803), Expect = 9.3e-198 Identity = 345/351 (98.29%), Postives = 347/351 (98.86%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. ExPASy TrEMBL
Match: A0A0A0LHM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078070 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 7.7e-27 Identity = 84/165 (50.91%), Postives = 104/165 (63.03%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. ExPASy TrEMBL
Match: A0A5D3DUB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00040 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-26 Identity = 108/302 (35.76%), Postives = 141/302 (46.69%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. ExPASy TrEMBL
Match: A0A5D3CQX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00230 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.0e-26 Identity = 80/188 (42.55%), Postives = 96/188 (51.06%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. ExPASy TrEMBL
Match: A0A0A0KND3 (DUF4283 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G467400 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 7.2e-25 Identity = 61/98 (62.24%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. NCBI nr
Match: KAE8648340.1 (hypothetical protein Csa_023105, partial [Cucumis sativus]) HSP 1 Score: 555.1 bits (1429), Expect = 4.5e-154 Identity = 278/300 (92.67%), Postives = 279/300 (93.00%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. NCBI nr
Match: TYK27243.1 (hypothetical protein E5676_scaffold244G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 4.6e-26 Identity = 108/302 (35.76%), Postives = 141/302 (46.69%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. NCBI nr
Match: TYK14201.1 (hypothetical protein E5676_scaffold5G00230 [Cucumis melo var. makuwa]) HSP 1 Score: 128.6 bits (322), Expect = 1.0e-25 Identity = 80/188 (42.55%), Postives = 96/188 (51.06%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. NCBI nr
Match: TYK05133.1 (hypothetical protein E5676_scaffold1769G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 2.1e-10 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CSPI05G13310.1 vs. NCBI nr
Match: TYK31477.1 (hypothetical protein E5676_scaffold455G007930 [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 4.6e-10 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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