CSPI05G13260.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAAAATGGTCATCCAAATATAGGATGTTAAGGATAATTATGGAAATATGGTGGTTTAAAAAGTTGAAAGAGTAAAGCATATGTTTATAAAAGTTCCCAAATCAAAATAAAACAAGATACTGATAAAACAGAGAATTGATAGTCTTTCACCAACTGTGTATCTGAACAGAGGAAAGCCCTCTAAACTTGCCTCCAACCATTCTTGATCGTTGAAGAGAAACCGCGGTTCCTCAATAAAGCAGCGGTCATCGTCGGTGGCTATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTGTAAGTCTCTCCCTTATTCGTTTCTTCTTTTTCTCCCTCTGTCATAAAGCTTATTTATTGCCTCAATTGGATTGGATCCGGCGGTGTAGATCGGAATGACAGTTGTAGGGAAACCCGTTTAATCTTTTTTTCGTTGTTTGGTGATCTTGTTATCACAAGTTATCACCCTCCTCGATGAATCTAGTTACTGGTTTGGACAACTTATGAAAACATTAGGAATCTTCGCTAGTTTTGGAAGTCAAATACATATTCTTTGGGAGCTTCTGTCTTTTTAGTTTCCAGAATTTGGCTAACTAGAAGGTAAAAAATGTTTTTGAAAGTAGATTAGAAAACTAGGAAGAAATTTATGTCAGTATGATTTCAAAATTAAATGAAAGAAAGAATTAGAGAATAGCCCCTGCTTCAATCACCAATCGACCTAAAAGGGTGAAGCTAGTGAGTGAAGGTAAATTTAATATAATGTCTAACACTCCCTCACTTGTAGACTTGAATTACGAAGAAAGACCCAATAAGTGAGAATCTATGTTAAATGAGGAGGAAACAACATTGTAAGGGCTTGAACCGAGGATATCCTGAAGTAAACTGCTAATACCATTTTAAATCACCAATCAACCCAAAAGTTTAAGCAAGTGGGTAAAGAAAAAATTAATTATATATCATCTAACACCCTTGGATATTCCACTAAAGAAACGTTGTGCCATTTTACAAGCCATTTATCAAGGGTACAGAGAAGTTGAAAAGATTTGTGGGTGTAATGGTTGATTTGGCTACTAACGTTGGCTTATCATCTTTCCTAATCGGATCATTGAACGTTTAAGAATGCCCCTTGGTACCAACCTTTACATTTGTGATGGCAAAAATTGCAAATTGAGCTTTCTGAAATGGCAGAACTTGCAGTTGTTGCTATCTCGCTTTAGTCAAGTTGATGGTTGCTAGTGTTCCTGCCTATGTTCTTCTGATGTTTAGAATTCTTCCCATTGTGATTGAGAACATGGAGAAGTCCTATTAGAAAATTTGCACAGAAAGCAATCGATTGCAATTATGATCGCTACTACTGCATTAGATGGAAAATTGTTGTTTCTAATTGTGGAGAAAGGTCTCATATCAGGCACATTAGAAAGCAGATTAAAGCTAGCCAATGGATTTACCATTTTAAAAAATAAAACCATTCCAAGCAAGTGCATAAAGATCCTTGGGGCTGGAAAATAGGTGGGTTTTTGCTATAGTCATTGTAAAATACTGGTTTTCTCATTGAAGGTTGTCAGTCAAGTGAATAGAAGGGCTTTGGTTAAATTCTTAGAAGATCTCTGTATGGGTTGGGAATATCACTCAAGTTTATCCTTCCCTAGGCAATAGGCTTTATTTCAGTGTAGAGAATGAACTGTTAAATACTGGTATGGGGGAATTTAGCAAGAGATAAAGGGAGGGGGCAAAAGATAGGAATGATATCTCTATTCAGCTATGGTACAAGTATGAATATCCAAGTATTCACAATATAGAAGGAACTAAAGTAATATTTTTGATGGGTAAGAAGGTCAGTCCATAACTGGTGATCTGTAATAGTAATTAGTAACTACACAAAGGAAACTGGGCGACATAAATGGCTTAAGTAAACAAATTATATTTTTGACACTTTCCAGCAAGCTGAGCTATAGATGTTGATTGACCCGTCCTGCTTTTTGTTAATTCACGTCACCATGTGATTAGGATTCTTCATACACATAGTATCATGTGATAGATCTTTGAACAATTGTTGGTCTACCCATCTGCATCCAGTATACATCCAAATGTTGTTGGGAAAATAGTGAAGATTATACTGTTGCAGTGAAATTGTAGGATAGTTTAAAAAGGAGTTCGGAAACTTATTGTCCTCAGGAGCATTCAGCTAATTCCTTTTATTTGGACTTTGGAATATGGTGTAGTTTCATGGGAGATTTGCTCAATGAAATCAGAGAAGAACCTCAAACGCCTAAAGGTGATTATTGAAGAGACCGCCAATTAAAAACTAAAAATGATAAACTATAATGATTGAAAGGGGGCTTTGTTTATTGCTTCCTCCAACTTTGAGGTTGGTTTTCTTTTTGTAATTATGAGTATGGATTCTTGAAGAAGGGTATGTTTTGATACTTTTTAGAAAAAGATGAAGGGAGTGAGAGTGATTTTTTAAAGAGAAATGATTTTGTAATCATGGTTTCAATTGGGTAAAGAATATGAGCCTAAATATACTAAGTATTCACAATACAGAAGGAAAAGATTTGTGACCAAGGAAATAAAATATGTTTAATGAATATGAGAGGTTCCCTGTCTTTGGTTGTTCCAATGGCAATTACATAAAGGAGAACGGTCCAATTTTTAATTGTAACGTGGAACTTTATTTTTGTAAGAATTTCATGGGTTTAGAGTGAAGATTGAATTGTTCTGAAAAGATCTTGGAATTCTTCTCTCTTCTTCAATGTAAGATCAAAGGGTATTGCTCACCCGTGTCATTCCCTTTCTTTAGAATCACTATTCATAAGATATTGTTGTGAATACCATCACTCATTTCTTTTCAAGGTCATTTGGAAAGTGAGGTGTCCTTCAAGTAACACTTCATCGTAGCACCAATGCTAACTGAAAAGCATTTTTTGTCACCTCGTTTGGATAGTGTTTGGCCATAGGTTGATGTCCTATCCTATCTCTTTCTTTTTAGCAGTGATGAAACTTTCTGTTCTTGATAAAAGGAAAATTAAAAATGACAATGATAATAATAATTAGGCAAAATTAATTTGGTGAAGCGAAATATCTATATACTGCATTTAGAAATAGTACACTTGAGTCTTTTGCTTGTCAAGACCAGAAAGGCCATTGCTGAGGTGTAGTCAGTTTGAGACAGGATACATGCATTTAATGGACAAAATCTTCCTATCTTGGATTTTCTTGGATAAGAACTGTTGGAAATTCTTATGTTGCTCGCCACGTAGGCATCAACATTGTAGATTAATTTCATCGTTTACTTGTCTTGTAAAATCATTCTTCTTTTTCAATAACAATCCTTAGATAGATTCAGTGTTTATTATCCATTTTTTGGTGCCGAAGTTAGTTATGATGTCTGAATGATATTCATGAGCATGGCGTTATTTATTCCAAAGCAAAGTAGCAATAAATCGTATTTGGGACAATGGACATAAATGACATCGGTTTGAAAGGACTTTTTATAATTATTCTCTTAGTCTTATCATTTGGGATTAAAGCCTGCCCGATTACATCTTGTTAAGGTGTTAGGTTCTGTTTTGGACTTTGCTTTCTTGCATTCCACTTTTGTATTCTTTTTATCTCACTTGCATTAACAGCCATGTCATGGAATTAGCATATGACTCCACACTGAATACAATACTTTTTAGGTCATCTAGATTTTATTTTTAGTTCCACACTTTTAATCCTTTTATATATTTTAATTGGTTACTTTTGAATTTAAAAAAATGATCTTGGGGCCTCATGCCCAAGCTTCGGTCATGGTCATGGCCTTGTCATGTCCACGAGTGTCCAGGAACTAATCTTTGTAATAAATTATTCATGTAATATCTATTCTAGCACGAACACATCTTTTGTTGCTTGCTTGCGTATCATTAGATCATGAACATTCTCATCTATCTTTTTCTGATTATTCTCCCTCTATTGATGTGCAAATACTACGGGCTTATGGCCTTGTATGTGCAAATAGCATGGGCTTATTGGCTTGTTTGGTAGGAAATCTCAAAACAAAAATTAAAATACAAGAGATTTCATGTTTTCGAATATTTGTTTGTAGCCGATTCCGAAATTGAATTCTAATCTAAACAATGGTTTAAAATTTTTGATAATATAGTTAAAAATCATTATTTAAACGAGTTATAGTTAACCCACTATTAGTTGACAATGAATTGTTATTGATTTCTTTAGAAACATGCTTTATGTTAAAAAAAAATTACAATTATTATTAACTTATTATACATTACATAATACATATTTTAATCTTTTTAGAAAATATGAATTTGAACTTACAACATGACATACGGTATCTAGAAAATCTAAGTGTGTTTATCTTTTTTTAATATAACTATGCATTTTAAAATTTAAAATTCAAAATCTGGATAAAATAAGAATACAATTATGTTATTTTTAGAATTTGCACACATAAACTTTCTAAGAAACAGTTTTCAAAAATAGATTTTGAATTATCTGTTAAACATTTGATAAACTCTAAAAGGATAAAGCAGAATTTGTATCGTAAGCTATACATGTCCTAAGCGATTCTAATAACGTGGGAATCAATTGTGCAGACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTCGACTTCCCATTCATGTGATCCGATTCAATACTCACTCTCAAACTTTCTAAGTTTGTATCTGTTTATGTTGATGTGCAGGATGATGTAAAAATGACCATCGACGTGTCTCTCTTTTTTTTTCTTTTTTTTTTGTTGATTTTTTCCTTAAGTTGAGAGATGTAAAAATGTTCATCAATATGTCGACAGTTTTATTCGATATTATCAAGTGGAAAGACATAAAAATGTTCGTGTTGATATTGTCAAAGTCAGATTTTGAAGCAAGTCTTAGACAAGATGGAGAGGTGTTCAAGAAGTCATAATAAAAATGCTAAATGATAAATAATATATGTGTTACCATAC ATTAAAAATGGTCATCCAAATATAGGATGTTAAGGATAATTATGGAAATATGGTGGTTTAAAAAGTTGAAAGAGTAAAGCATATGTTTATAAAAGTTCCCAAATCAAAATAAAACAAGATACTGATAAAACAGAGAATTGATAGTCTTTCACCAACTGTGTATCTGAACAGAGGAAAGCCCTCTAAACTTGCCTCCAACCATTCTTGATCGTTGAAGAGAAACCGCGGTTCCTCAATAAAGCAGCGGTCATCGTCGGTGGCTATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTCGACTTCCCATTCATGTGATCCGATTCAATACTCACTCTCAAACTTTCTAAGTTTGTATCTGTTTATGTTGATGTGCAGGATGATGTAAAAATGACCATCGACGTGTCTCTCTTTTTTTTTCTTTTTTTTTTGTTGATTTTTTCCTTAAGTTGAGAGATGTAAAAATGTTCATCAATATGTCGACAGTTTTATTCGATATTATCAAGTGGAAAGACATAAAAATGTTCGTGTTGATATTGTCAAAGTCAGATTTTGAAGCAAGTCTTAGACAAGATGGAGAGGTGTTCAAGAAGTCATAATAAAAATGCTAAATGATAAATAATATATGTGTTACCATAC ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAA MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ* Homology
BLAST of CSPI05G13260.1 vs. ExPASy TrEMBL
Match: A0A0A0KPT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.2e-32 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. ExPASy TrEMBL
Match: A0A1S3CK24 (uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 9.2e-31 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. ExPASy TrEMBL
Match: A0A6J1FE48 (uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC111444698 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.1e-27 Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. ExPASy TrEMBL
Match: A0A6J1K0Z3 (uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.0e-27 Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. ExPASy TrEMBL
Match: A0A6J1CIZ9 (uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011789 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. NCBI nr
Match: XP_011655131.2 (uncharacterized protein LOC101207856 [Cucumis sativus] >KGN50894.1 hypothetical protein Csa_023128 [Cucumis sativus]) HSP 1 Score: 147.5 bits (371), Expect = 4.5e-32 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. NCBI nr
Match: XP_008463128.1 (PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]) HSP 1 Score: 142.1 bits (357), Expect = 1.9e-30 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. NCBI nr
Match: KAG6579058.1 (hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.0 bits (328), Expect = 4.4e-27 Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. NCBI nr
Match: XP_022938472.1 (uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothetical protein SDJN02_21699 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. NCBI nr
Match: XP_023549700.1 (uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CSPI05G13260.1 vs. TAIR 10
Match: AT3G14430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 6.3e-16 Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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