CSPI05G12190.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI05G12190.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein CHROMATIN REMODELING 19
Location	Chr5: 11120032 .. 11125255 (-)
Sequence length	960
RNA-Seq Expression	CSPI05G12190.1
Synteny	CSPI05G12190.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAAACTCATTCTAAATGAGTGCTTTCGGCATGTGAAGTAAACCTCCCTAAAATGAAAATTGGTCCTCTATTCTATTTACGTAATTAACAAAAAAAAAAGAAAAGAAAAAAGAAAGAAAAAAAGGAAAAAAAAGGGAAAAACACTTTTACGTGAACTCTTTCGCACAGTATACGCCGAACGGCGGTCGTTCCTTTCGTCTTCTTCTTCTTCATTTCTAACAGTCTTCACCGCCGGAAAATTCTCTCAACTTCTCCCTTACAGCATGAAGCGCGTCTTCGAAGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCACAAAACCACAGACTGAACCTTCGATCCCTCCTCCGATTGAATCTTTCGCATACCGACCCCACCAGCTCTATATTTCCGACGAGAGTAGCGACGATTGTGTCGTAGTCATGGAAAGTTCCAAAAATTATGAGGAAAATTTGGAGGACGAGGATGTCGAGGTTGAGGGAGTGAAATCCACCACGGCAGTGAGTCGTGGCCGTCGGTTTGTGGTTGATGACGAAGATGATGAAAGTGAGAGGGAATTGACTGAGGTTTGTGATGTAAAGTCGACGAGCGAGGAGGAGCTGGAGGAGGGTAGGGAGGATGACGATGATGTCGTCGGTAAGGCTTTGCAGAAGTGTGCAAAATTATCTGCCGAGTTGAAGAGAGAGCTGTACGGCTCTTCGGTTTCTGCCTCTGAACGATATTCAGAAGTGGAGTCTTCTTCCGTTAGGATAGTCACCCAGGTACATCTCAGAGTTCAATCTGAATTGGAGCGCTTTTATTTCCTCAGCATAATTATGGATTGGTGTTGAATGGTCTTCTTGCTCGGTTTTGTTTTGTCCCTTAACAGATTTAATAGTTTTTGTTTAATAAGTGGATGCCATAAATCAACATCTAACCTTTTTATGATCCGTTAAATGTGTATATTGTTTGTTCTTTTTGTAAAACGAACCTCACAAGGAGAAATGAAAAAAATGAACAAGAACAAAGCCCGTACAATTGAGCCAAAGACTTTGCAGGATAGAGCTTCAATTGTTGCCATTTTTTTTTTGTTTGATATGAAATAATTTTATTGATGTTGTGAAATTTACAAAAAAAAAAAGAAAAAGAAAAAAAGAGGAGAATCTTCTTAGAGATGACAAGAGGTTTCCAATTTGTTTAAAGGGAAGCATAGGTATAAGACTTAAAGGAAGTTGGCACTGTACACCAGGATATAGCAAGATAAATTACCTGATCATAAGACCCATTGCAAGCATGTTTCTTATAGTAGACAGAATTCTTTTATTTCTTTTCATCTAAAAGGTCCCAAAAGAAAGACATAAAAATGTGCAACCACAACAATGCCTCATCCTTCTTTAGAAGGTGGCCAGAGAGGATGGTGAAGCGAAGGGTCTTCATGTCAATAGGGAGGGTCATCCCTCTTGACGATCTTCAACCTTTTACTCCAATTTTTCTGGTTTGGAGATTAATATGGCGAAGTGCCAACTCTTGGGGTAAATTGTCATTTGAACAGATTAATATGGCTAAGTGCCAACTTGGGGTAAATTATCATTTGAACAGGGTGTTATGGGGTGTCAACCAGGTTGAGATGTCCAGGTGCACCTCATGATCCATGGTTGCATGCTCATTGTATAATTCTCTTGTACTATGAGCTTTCGTCTCATTATTATTATATTAATAAAGAGGCTGTCTCCTTTTCAAAAATAAAATTTGTTGACAGTAGTTGTAGATAAGATGGCTCTTCCTCTACTACAATTCATAGTCTTGTTTTGTTATTTTTATTATTCCTGGCAATGATTGTAAATTTTTAGTCTTTATCAATTTTTTTTTTGGAACAGAGACAAGCTTTTTTATTAATAAGAACTCAGAGTACAAGAGAATTATACAATGAGTAATAAAGAAGTCTAAATTAGGGAACTTGGGGGATCAGGAGGCGCACTCAGACATCTTAACTAGGTTGACACCTCCTTAGCGCCAATCATCATATCCTGAGAATACAAAAACAAAACTTTCTAAAATTAATTAATGTCCAATGTAATACAAAGGGGCCAAAAGGCAATAAAAAACTAGAAGAAAATCTAACACCCGATAAGGCCAAAAACATAAAAACATAAAAGTTCTAAGGCTAAAAATGAAGAAATCCACCAAGACTTCAAAACACAGAAAAAGGCCTACGGTAAGAACTAAGAATCTTTCCAAGTTATTTGTAAGATTCTTTTTGTAGGTAATGACGATGCTAAGAGGGTGTTAACCTAGTTGAGATGTCTGGGTTGTATCTTTATGCTTGTTGTTTCCTTTGTACTTTGAGCATTAGTCTCATATCATTATCTTAATGAAGAGGCTCGTTTCTTGTTCTAAAAGAAGTTATAAGCCAATACTGAGCAAAAGCAAATACAAAGATAGTCATTAGAAAACGCAAGCAGTACTGGAGCTAAAATATGACAAATATCAAAGGGAGATGTCCACCGAACATGAAGGGCAAAGCATCAACTTGGAGGGAAGATAAAAGCTTGCCAATTCAATAGTCTCTTGCAAAGAGTAGTCCTGGAAGGTTTTGGATAAAGAGCACCACGGTGTTGCATAAGAAACCTTAGATTTATCAGTGAGGAGAAAACCCACGTGAGATGGGATGATCATCAATAAAGGTCACATACCATCGTTTTTTTGGAGAGGTTATAATACTCTAGGTACGCCAAACATCACTACGAATAAGAGTGAAGGGTTGAGAAGGTTTATAAGGTTGGGGCAGAAATGTGACTCTATGCTGTTTTGCATGATCACAAGATAGAGAAGAGATATAAACTTTATTAAATAAACGAGGAAATAAATATTTTATGTATTGAAAAGTTGGGTGATCAAGGTGAAAATGCCATAACATACCATATTTTTCTGAAGTTGGAAATTGAGAAGACAACAAACTAGTCCCATAACAATTCCTAGAGGGAGCATTATTGTCAAGGAGATAGAGTCTCTTATTGAGACGAGCGGTGCCAATCGTCTTCCCCAAGCTCAAGCCCTGAAAGAAAACATTGTAGGGTTAGAAGGAAAATTGACAATTTAGGTCACTTGTTATTTTACTAATAGATAGTCAATTATAAGATATTTTGGGTACATGCAACACGTTTTGTAAAGTTAAACCATCGAAGGGAGAAATATGACCCTTGCTTGCAATAGGAGCACAGGACCCATCTGCCATTTGAATCTTTTCATTACTAGCACTTGAAGGATAAGATAGAAAATTATAATAGGATCTAGTCAAATGATAAGTGTCCACTGAATCAGGTATCTATGGCTTCTTACCATTTATGCTTAGGAAACTTAAGGATTTAGAGGTATCTGATTGAACAATGGCCCTAAAGGAAGAGACACCATGGTTACTTTGACAATTCACCCGAGATTGTGGTTGGGGGGCACTCGCCAATTCTCTTAACAGCTTGACTAGGGCTGGGCTTGTCATTTGAAGGGCGTCTTTTGCCATTTGATGGTCAATCGTGTAACTTCTAGCACTATTCTTTCGTATGCTAGGGTTTCTTGCCAAGTTCACACACCGGGGTTTGTTTCCCATTTTGTTTCATTGTAAGAACCCGATAATTTTGCATTGAAAGAAGCAAAATCAGCAAAATCAGGAGGAGATACCATCATGATGTTCATAGCACTGACTTTGTCTTCCTCTAGATCCACCTTAGGACACACTTCTATAAGAGAACGTATAGGCTTTTGTCCCAATATACGGCCTCGCACTACATCGAACTTGGAGTTCAAATCAGCTAAGAAATCATAAACACGATCAACTTCCTCAAGCTTGGAATATTGGACACTTTCGCACGGACAATCCTAGATATAATTTCACGACACATATCCATCTTTGACCAAATTAGGGGCAATTTGTTAAAGTATGAAGTGACATCTATCGTCCCCTGTTTGCACTTATGAGCATGTTTACGCAGAGTGTAAAGATGAGATGCGTTCTTTCTTTTATAATATATTTTTGAACTGCATCCCAGATATCTTGAGCAGTTGCAACATACATTGGTTTCCCTATCTGAGGTTCCACATTATTGCTTAATTAGCTGTGATCGAAGGAGGGAGTTTTCCCCTTTCCAAATATGCTCTCTCTGGTCTGGGTCTTGGTATCTCATCGGTGGACACTCAAACTTGTGACGTCCCTCAAGGACCATTGGTAAATTGAAAGGAATGCCTGAATTCATTGTTCTAGAATTTAGGTTTGTGGAAGCACCTAGGGCTGCCCAAAGAGCAAAGATTTGCTGAAAATTTGTCTGAAGATTAGCCAATTGTTGTTGTAACATTATCGGGGACAAACCATTGAACCTTGATGTTCATAACTAGGCAACACATGATGAGCAAGACTCGATTGTTGCTAGAAGTTTGTTGCCGTGACATGGAATTTACCTTTGTGCTAGGCAGACGACTCACTAATCTCAGTTTCATGGTGTATGTTTCGGCTAGGGTTTTCGTCAAAAGTTTATGGTGGCACCATAAATGAACGGATATGCAAGAACTGAAGATAACAATCAATAACGACTTGGACAACAGTGACGGCAGGCTGCAGTGGAAAAGTTGGCGACGCTGGCTATGATTCTGTCGACGTTGGCCGTTGTGGCAGTTGTGGCTTGGACAAGACTGGTGCAGAGCTCAGGTGATCTTGCACCGGATAGTTTTCGCCAATGGCGGTTAGGTTTCGTCACCTCTCTATGATACCATGTTAAATGGTAGAGAAGAGAACCCAAAGTTTACGTGGAAAACCCTAGAACAGGGAGAAAGAGGCACGACAGAGAGTCTAGTCCTAATATAAAAAAGGAAATGAAAGTATAGTTACAGTTTGGACTGTGTTTTCTGTTCTGTTCTTACAATCAATAATCTTGTTCATTATTATTTTTCTATTTCTATTGATTTATAATCCTAAATTTTTTAAAAAAGAATTTCAATGCACAAGTTGCTTCTGTAAGACAAAAATGCAATTTAATGAATTTTAATATCCTAATATAGGATGATATTAATGCGGCTTGCAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACTGCTCTTACCATCATAATGCGTATAACATAAATTTGTAGTAACTGCC

mRNA sequence

CATTAAACTCATTCTAAATGAGTGCTTTCGGCATGTGAAGTAAACCTCCCTAAAATGAAAATTGGTCCTCTATTCTATTTACGTAATTAACAAAAAAAAAAGAAAAGAAAAAAGAAAGAAAAAAAGGAAAAAAAAGGGAAAAACACTTTTACGTGAACTCTTTCGCACAGTATACGCCGAACGGCGGTCGTTCCTTTCGTCTTCTTCTTCTTCATTTCTAACAGTCTTCACCGCCGGAAAATTCTCTCAACTTCTCCCTTACAGCATGAAGCGCGTCTTCGAAGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCACAAAACCACAGACTGAACCTTCGATCCCTCCTCCGATTGAATCTTTCGCATACCGACCCCACCAGCTCTATATTTCCGACGAGAGTAGCGACGATTGTGTCGTAGTCATGGAAAGTTCCAAAAATTATGAGGAAAATTTGGAGGACGAGGATGTCGAGGTTGAGGGAGTGAAATCCACCACGGCAGTGAGTCGTGGCCGTCGGTTTGTGGTTGATGACGAAGATGATGAAAGTGAGAGGGAATTGACTGAGGTTTGTGATGTAAAGTCGACGAGCGAGGAGGAGCTGGAGGAGGGTAGGGAGGATGACGATGATGTCGTCGGTAAGGCTTTGCAGAAGTGTGCAAAATTATCTGCCGAGTTGAAGAGAGAGCTGTACGGCTCTTCGGTTTCTGCCTCTGAACGATATTCAGAAGTGGAGTCTTCTTCCGTTAGGATAGTCACCCAGGATGATATTAATGCGGCTTGCAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACTGCTCTTACCATCATAATGCGTATAACATAAATTTGTAGTAACTGCC

Coding sequence (CDS)

ATGAAGCGCGTCTTCGAAGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCACAAAACCACAGACTGAACCTTCGATCCCTCCTCCGATTGAATCTTTCGCATACCGACCCCACCAGCTCTATATTTCCGACGAGAGTAGCGACGATTGTGTCGTAGTCATGGAAAGTTCCAAAAATTATGAGGAAAATTTGGAGGACGAGGATGTCGAGGTTGAGGGAGTGAAATCCACCACGGCAGTGAGTCGTGGCCGTCGGTTTGTGGTTGATGACGAAGATGATGAAAGTGAGAGGGAATTGACTGAGGTTTGTGATGTAAAGTCGACGAGCGAGGAGGAGCTGGAGGAGGGTAGGGAGGATGACGATGATGTCGTCGGTAAGGCTTTGCAGAAGTGTGCAAAATTATCTGCCGAGTTGAAGAGAGAGCTGTACGGCTCTTCGGTTTCTGCCTCTGAACGATATTCAGAAGTGGAGTCTTCTTCCGTTAGGATAGTCACCCAGGATGATATTAATGCGGCTTGCAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACTGCTCTTACCATCATAATGCGTATAACATAAATTTGTAG

Protein sequence

MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGGGTEYCSYHHNAYNINL*

Homology

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BLAST of CSPI05G12190.1 vs. ExPASy Swiss-Prot
Match: Q9ZUL5 (Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana OX=3702 GN=ETL1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-47
Identity = 123/241 (51.04%), Postives = 157/241 (65.15%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSI------PPPIESFAYR--PHQLYISDE 60
           MKR F+EIS+EEWS HSF  SRV  +P+T           P IESFA+R     + I   
Sbjct: 1   MKRDFDEISEEEWSQHSFNASRVLKRPRTPKKTRAATNPTPSIESFAFRRPSTAMTIESN 60

Query: 61  SSD-DCVVVMESSK--------NYEENLEDEDVEVEGVKSTTAVSR-GRRFVVDDE---- 120
           SSD DCV + +           N E+ L +++ EVE  K     +R GRRFV++DE    
Sbjct: 61  SSDGDCVEIEDLGDSDSDVKIVNGEDLLLEDEEEVEETKVVMRAARVGRRFVIEDEEASD 120

Query: 121 DDESERELTEVCDVKSTSEEELEEG-------REDDDDVVGKALQKCAKLSAELKRELYG 180
           DD+ E E        S SE+E   G       R +D+DVVGKALQKCAK+SA+L++ELYG
Sbjct: 121 DDDDEAE-------SSASEDEFGGGGGGSGGRRGEDEDVVGKALQKCAKISADLRKELYG 180

Query: 181 SSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVG 213
           +S   ++RYSEVE+S+VRIVTQ+DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ 
Sbjct: 181 TSSGVTDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIE 234

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BLAST of CSPI05G12190.1 vs. ExPASy TrEMBL
Match: A0A1S3CC04 (protein CHROMATIN REMODELING 19 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499098 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103
Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+ESERELTEV DVKSTS++EL
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           K EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

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BLAST of CSPI05G12190.1 vs. ExPASy TrEMBL
Match: A0A1S3CC36 (protein CHROMATIN REMODELING 19 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499098 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103
Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+ESERELTEV DVKSTS++EL
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           K EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

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BLAST of CSPI05G12190.1 vs. ExPASy TrEMBL
Match: A0A1S4E2R3 (protein CHROMATIN REMODELING 19 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499098 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103
Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+ESERELTEV DVKSTS++EL
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           K EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

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BLAST of CSPI05G12190.1 vs. ExPASy TrEMBL
Match: A0A6J1FXC0 (protein CHROMATIN REMODELING 19 OS=Cucurbita moschata OX=3662 GN=LOC111447914 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 187/215 (86.98%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVF+EISD+EWSNHSFKPSRVF+KPQT+P IPPPIESFAYRP  LYISD+S DDCVVV
Sbjct: 1   MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYRPPSLYISDDSGDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTS---E 120
           MESSKN++E+LED+DVEVEGVKS+TA+SRGRRFVVDDED+ESE+ELTEVCDV+STS   E
Sbjct: 61  MESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEE 120

Query: 121 EELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDIN 180
           EE EE RED+DDVVG AL+KCAKLSAELKRELYGSSVSA ERYSEVESSSVRIVTQDDIN
Sbjct: 121 EEEEEDREDEDDVVGMALRKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQDDIN 180

Query: 181 AACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           AACKAEDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Sbjct: 181 AACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG 215

[Close]

BLAST of CSPI05G12190.1 vs. ExPASy TrEMBL
Match: A0A6J1JU99 (protein CHROMATIN REMODELING 19 OS=Cucurbita maxima OX=3661 GN=LOC111487952 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.3e-95
Identity = 186/216 (86.11%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVF+EISD+EWSNHSFKPSRVF+KPQT+P IPPPIESFAYRP  LYISD+S DDCVVV
Sbjct: 1   MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYRPPSLYISDDSGDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTS---- 120
           MESSKN++E+LED+DVEVEGVKS+T +SRGRRFVVDDED+ESE+ELTEVCDV+STS    
Sbjct: 61  MESSKNFKESLEDDDVEVEGVKSSTVMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEE 120

Query: 121 EEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDI 180
           EEE EE RED+DDVVG AL+KCAKLSAELKRELYGSSVSA ERYSEVESSSVRIVTQDDI
Sbjct: 121 EEEEEEDREDEDDVVGMALRKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQDDI 180

Query: 181 NAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           NAACKAEDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Sbjct: 181 NAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG 216

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BLAST of CSPI05G12190.1 vs. NCBI nr
Match: XP_004140399.1 (protein CHROMATIN REMODELING 19 [Cucumis sativus] >XP_031741288.1 protein CHROMATIN REMODELING 19-like [Cucumis sativus] >KAE8648070.1 hypothetical protein Csa_018841 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CSPI05G12190.1 vs. NCBI nr
Match: XP_038877194.1 (protein CHROMATIN REMODELING 19 isoform X1 [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 4.0e-103
Identity = 200/212 (94.34%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVFEEISDEEWSNHSFKPSRVF+KPQTEPSIPPPIESFAYRP QLYISDESSDDC VV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFSKPQTEPSIPPPIESFAYRPQQLYISDESSDDCCVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKN+EENLEDEDVEVEGVKSTT VSRGRRFV+DDED++SERELTEVCDVKSTSEEE 
Sbjct: 61  MESSKNFEENLEDEDVEVEGVKSTTTVSRGRRFVIDDEDEDSERELTEVCDVKSTSEEEQ 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLS ELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSDELKRELYGSSVSACERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CSPI05G12190.1 vs. NCBI nr
Match: XP_038877197.1 (protein CHROMATIN REMODELING 19 isoform X3 [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 4.0e-103
Identity = 200/212 (94.34%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVFEEISDEEWSNHSFKPSRVF+KPQTEPSIPPPIESFAYRP QLYISDESSDDC VV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFSKPQTEPSIPPPIESFAYRPQQLYISDESSDDCCVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKN+EENLEDEDVEVEGVKSTT VSRGRRFV+DDED++SERELTEVCDVKSTSEEE 
Sbjct: 61  MESSKNFEENLEDEDVEVEGVKSTTTVSRGRRFVIDDEDEDSERELTEVCDVKSTSEEEQ 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLS ELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSDELKRELYGSSVSACERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CSPI05G12190.1 vs. NCBI nr
Match: XP_038877196.1 (protein CHROMATIN REMODELING 19 isoform X2 [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 4.0e-103
Identity = 200/212 (94.34%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVFEEISDEEWSNHSFKPSRVF+KPQTEPSIPPPIESFAYRP QLYISDESSDDC VV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFSKPQTEPSIPPPIESFAYRPQQLYISDESSDDCCVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKN+EENLEDEDVEVEGVKSTT VSRGRRFV+DDED++SERELTEVCDVKSTSEEE 
Sbjct: 61  MESSKNFEENLEDEDVEVEGVKSTTTVSRGRRFVIDDEDEDSERELTEVCDVKSTSEEEQ 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLS ELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSDELKRELYGSSVSACERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CSPI05G12190.1 vs. NCBI nr
Match: XP_016902524.1 (PREDICTED: protein CHROMATIN REMODELING 19 isoform X3 [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 6.8e-103
Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120
           MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+ESERELTEV DVKSTS++EL
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC 180
           EE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAAC
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQDDINAAC 180

Query: 181 KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 213
           K EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 181 KVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CSPI05G12190.1 vs. TAIR 10
Match: AT2G02090.1 (SNF2 domain-containing protein / helicase domain-containing protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 123/241 (51.04%), Postives = 157/241 (65.15%), Query Frame = 0


Query: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSI------PPPIESFAYR--PHQLYISDE 60
           MKR F+EIS+EEWS HSF  SRV  +P+T           P IESFA+R     + I   
Sbjct: 1   MKRDFDEISEEEWSQHSFNASRVLKRPRTPKKTRAATNPTPSIESFAFRRPSTAMTIESN 60

Query: 61  SSD-DCVVVMESSK--------NYEENLEDEDVEVEGVKSTTAVSR-GRRFVVDDE---- 120
           SSD DCV + +           N E+ L +++ EVE  K     +R GRRFV++DE    
Sbjct: 61  SSDGDCVEIEDLGDSDSDVKIVNGEDLLLEDEEEVEETKVVMRAARVGRRFVIEDEEASD 120

Query: 121 DDESERELTEVCDVKSTSEEELEEG-------REDDDDVVGKALQKCAKLSAELKRELYG 180
           DD+ E E        S SE+E   G       R +D+DVVGKALQKCAK+SA+L++ELYG
Sbjct: 121 DDDDEAE-------SSASEDEFGGGGGGSGGRRGEDEDVVGKALQKCAKISADLRKELYG 180

Query: 181 SSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVG 213
           +S   ++RYSEVE+S+VRIVTQ+DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ 
Sbjct: 181 TSSGVTDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIE 234

The following BLAST results are available for this feature:

BLAST of CSPI05G12190.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUL5	2.5e-47	51.04	Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana OX=3702 GN=ETL1 PE=1 SV=...	[more]

BLAST of CSPI05G12190.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CC04	3.3e-103	94.81	protein CHROMATIN REMODELING 19 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A1S3CC36	3.3e-103	94.81	protein CHROMATIN REMODELING 19 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A1S4E2R3	3.3e-103	94.81	protein CHROMATIN REMODELING 19 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A6J1FXC0	1.1e-95	86.98	protein CHROMATIN REMODELING 19 OS=Cucurbita moschata OX=3662 GN=LOC111447914 PE...	[more]
A0A6J1JU99	4.3e-95	86.11	protein CHROMATIN REMODELING 19 OS=Cucurbita maxima OX=3661 GN=LOC111487952 PE=4...	[more]

BLAST of CSPI05G12190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140399.1	9.8e-110	100.00	protein CHROMATIN REMODELING 19 [Cucumis sativus] >XP_031741288.1 protein CHROMA...	[more]
XP_038877194.1	4.0e-103	94.34	protein CHROMATIN REMODELING 19 isoform X1 [Benincasa hispida]	[more]
XP_038877197.1	4.0e-103	94.34	protein CHROMATIN REMODELING 19 isoform X3 [Benincasa hispida]	[more]
XP_038877196.1	4.0e-103	94.34	protein CHROMATIN REMODELING 19 isoform X2 [Benincasa hispida]	[more]
XP_016902524.1	6.8e-103	94.81	PREDICTED: protein CHROMATIN REMODELING 19 isoform X3 [Cucumis melo]	[more]

BLAST of CSPI05G12190.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02090.1	1.7e-48	51.04	SNF2 domain-containing protein / helicase domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..39

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI05G12190	CSPI05G12190	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G12190.1.utr3p1	CSPI05G12190.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G12190.1.cds2	CSPI05G12190.1.cds2	CDS
CSPI05G12190.1.cds1	CSPI05G12190.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G12190.1.utr5p1	CSPI05G12190.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI05G12190.1	CSPI05G12190.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding