CSPI05G07450.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI05G07450.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ethylene-responsive transcription factor ERF106-like
Location	Chr5: 6467572 .. 6468597 (-)
Sequence length	1026
RNA-Seq Expression	CSPI05G07450.1
Synteny	CSPI05G07450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGGGTAGGATTGGTGGGTTGGTTTTTTATTTTTATATATACTAACTTAGAAAAATTTTCATATGTTTTTCAATAGATAAGTTGAACAAATTGTCATTCAACGTGCAAATGTATGTATATATATACACGATCGGATTGAGTCGGATGAACGGAGAACTAGCTCAATTTTTCTCTCTTTAATTTGGATGTTTTTGGAAATTCCAAAATTAGGGTTTGTTTAATGTGAAGTATTAGAATTCGGTTTACACGTGTTGGTAGAGGCCATCGTAATTTCCACCACTATAAATCCTAAACCCAAAAGCTTTCCTCAACTCAGTGTTCAATCTCATCAAAATGGAACTACCACTTGAAGAAGACAACGACGACGAGTTCTCCCCATTGAACCTCATCCGCTACCATCTTCTTCAAGACAGCTCCCATTCCTTCTCCACTCTCCCAGATTTCGGATTCAAACTCCAATTCCAAGATTTCGACTACGTCAAACCATCATCCCAAGAGGAAGAAGACCCTCCGATTCAAAGTCCAAAGACCCACCCACAACAACAATCCCCTGACGACGGTAGGCGTTACAGAGGGGTTCGGCGGCGGCCCTGGGGGAAGTTTGCTGCGGAGATTCGTGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTTGATTCGGATGTTGATGCGGCTAGAGCTTATGATTCTGCTGCTTTTAAGATAAGGGGAAGAAAAGCTAAGCTGAACTTTCCGTTGGATGCCGGAAAAGCTGACCCGCCGCCGGGGAATGGCCGGAAGAAGAGACGTGAGACAAATTTGAATGTTTAGTGAAAATGGAAAAACAGTTTACAAAATCTTTGAACAAATTTTCATTGTGGATTAATCATGAATTTGTATATAAATATGTTATGTTAAATTACAATTTCTTTTCTTTTCTTTTCATTTTTGTTTGATTCAACAAAATATTTATCTTACAACTTGGAGATATTAATTTTGGACTTCGTTGCTAAATTTGGTGATGGAAACATTCATTAAAG

mRNA sequence

GTCGGGTAGGATTGGTGGGTTGGTTTTTTATTTTTATATATACTAACTTAGAAAAATTTTCATATGTTTTTCAATAGATAAGTTGAACAAATTGTCATTCAACGTGCAAATGTATGTATATATATACACGATCGGATTGAGTCGGATGAACGGAGAACTAGCTCAATTTTTCTCTCTTTAATTTGGATGTTTTTGGAAATTCCAAAATTAGGGTTTGTTTAATGTGAAGTATTAGAATTCGGTTTACACGTGTTGGTAGAGGCCATCGTAATTTCCACCACTATAAATCCTAAACCCAAAAGCTTTCCTCAACTCAGTGTTCAATCTCATCAAAATGGAACTACCACTTGAAGAAGACAACGACGACGAGTTCTCCCCATTGAACCTCATCCGCTACCATCTTCTTCAAGACAGCTCCCATTCCTTCTCCACTCTCCCAGATTTCGGATTCAAACTCCAATTCCAAGATTTCGACTACGTCAAACCATCATCCCAAGAGGAAGAAGACCCTCCGATTCAAAGTCCAAAGACCCACCCACAACAACAATCCCCTGACGACGGTAGGCGTTACAGAGGGGTTCGGCGGCGGCCCTGGGGGAAGTTTGCTGCGGAGATTCGTGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTTGATTCGGATGTTGATGCGGCTAGAGCTTATGATTCTGCTGCTTTTAAGATAAGGGGAAGAAAAGCTAAGCTGAACTTTCCGTTGGATGCCGGAAAAGCTGACCCGCCGCCGGGGAATGGCCGGAAGAAGAGACGTGAGACAAATTTGAATGTTTAGTGAAAATGGAAAAACAGTTTACAAAATCTTTGAACAAATTTTCATTGTGGATTAATCATGAATTTGTATATAAATATGTTATGTTAAATTACAATTTCTTTTCTTTTCTTTTCATTTTTGTTTGATTCAACAAAATATTTATCTTACAACTTGGAGATATTAATTTTGGACTTCGTTGCTAAATTTGGTGATGGAAACATTCATTAAAG

Coding sequence (CDS)

ATGGAACTACCACTTGAAGAAGACAACGACGACGAGTTCTCCCCATTGAACCTCATCCGCTACCATCTTCTTCAAGACAGCTCCCATTCCTTCTCCACTCTCCCAGATTTCGGATTCAAACTCCAATTCCAAGATTTCGACTACGTCAAACCATCATCCCAAGAGGAAGAAGACCCTCCGATTCAAAGTCCAAAGACCCACCCACAACAACAATCCCCTGACGACGGTAGGCGTTACAGAGGGGTTCGGCGGCGGCCCTGGGGGAAGTTTGCTGCGGAGATTCGTGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTTGATTCGGATGTTGATGCGGCTAGAGCTTATGATTCTGCTGCTTTTAAGATAAGGGGAAGAAAAGCTAAGCTGAACTTTCCGTTGGATGCCGGAAAAGCTGACCCGCCGCCGGGGAATGGCCGGAAGAAGAGACGTGAGACAAATTTGAATGTTTAG

Protein sequence

MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPPIQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV*

Homology

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy Swiss-Prot
Match: Q9LY05 (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.1e-31
Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 3   LPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPPIQ 62
           +P +E +     P + +   L  +   S S+ P+               SS  E D   Q
Sbjct: 48  VPKQEPDSPVLDPDSFVNEFLQVEGESSSSSSPELN-----------SSSSTYETD---Q 107

Query: 63  SPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDSA 122
           S K   + +   D R YRGVRRRPWGKFAAEIRDP++KGSR+WLGTF+SDVDAARAYD A
Sbjct: 108 SVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCA 167

Query: 123 AFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           AFK+RGRKA LNFPLDAGK + P  +GRK++R
Sbjct: 168 AFKLRGRKAVLNFPLDAGKYEAPANSGRKRKR 185

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy Swiss-Prot
Match: Q9FKG2 (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-30
Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 52  SSQEEEDPPIQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDS 111
           SS     P +++     + +  ++ R YRGVRRRPWGKFAAEIRDP++KGSR+WLGTF+S
Sbjct: 80  SSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFES 139

Query: 112 DVDAARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           D+DAARAYD AAFK+RGRKA LNFPLDAGK D P  + RK+RR
Sbjct: 140 DIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy Swiss-Prot
Match: Q8VY90 (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.4e-26
Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 6   EEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPPIQS-- 65
           ++  + + S L+LI  HLL D    F +L  F   +      +   S+  +  PP+ +  
Sbjct: 6   QQQQEQDQSALDLITQHLLTD----FPSLDTFASTIH-----HCTTSTLSQRKPPLATIA 65

Query: 66  -PKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDSA 125
            P T P  Q  +D R YRGVRRRPWGK+AAEIRDP++KG RVWLGTFD+ ++AAR YD A
Sbjct: 66  VPTTAPVVQE-NDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKA 125

Query: 126 AFKIRGRKAKLNFPLDAGK 142
           AFK+RG KA LNFPL+AGK
Sbjct: 126 AFKLRGSKAILNFPLEAGK 134

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.4e-26
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 28  SHSFSTLP-DFGFKLQFQDFDYVKPSSQEEED-----------PPIQ------------- 87
           S  F ++P +F  ++   DFD+ KPS+Q +             PP++             
Sbjct: 78  SMEFLSIPFEFDSEVSVSDFDF-KPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFA 137

Query: 88  SPKTHPQQQSP---DDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAY 147
           +  T P+   P   ++ + YRGVR+RPWGKFAAEIRDP+++GSRVWLGTFD+ ++AARAY
Sbjct: 138 AENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAY 197

Query: 148 DSAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           D AAF++RG KA LNFPL+ GK  P    G KKR+
Sbjct: 198 DEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy Swiss-Prot
Match: Q40478 (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.6e-23
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 50  KPSSQEEEDPPIQSPKTHPQQQ-------SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGS 109
           K +S +E  P +       QQ+        P + + YRGVR+RPWGKFAAEIRDP+RKG+
Sbjct: 109 KQTSFKERKPSLNIAIPMKQQEVVQKVEVVPTEKKHYRGVRQRPWGKFAAEIRDPNRKGT 168

Query: 110 RVWLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGKAD-------PPPGNGRKKRRE 157
           RVWLGTFD+ ++AA+AYD AAFK+RG KA +NFPL+             P  +GRK+ RE
Sbjct: 169 RVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRE 228

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy TrEMBL
Match: A0A0A0KN33 (ERF-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167110 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.4e-86
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP
Sbjct: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60

Query: 61  IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD 120
           IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD
Sbjct: 61  IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD 120

Query: 121 SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV 161
           SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV
Sbjct: 121 SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV 160

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy TrEMBL
Match: A0A5A7UNP1 (Ethylene-responsive transcription factor ERF106-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00050 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.5e-74
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELP+EEDNDDEFSPLNLIRYHLLQD SHSFSTL DFGFKL+F+DF+YVKPS +EEE+PP
Sbjct: 1   MELPVEEDNDDEFSPLNLIRYHLLQD-SHSFSTLRDFGFKLEFEDFEYVKPSEEEEEEPP 60

Query: 61  IQSPKTHPQQQ-----SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120
           IQSPK HP++Q     SPD GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA
Sbjct: 61  IQSPKRHPERQSPRSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120

Query: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGR-KKRRETNLN 160
           ARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR KKRRETNLN
Sbjct: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRKKKRRETNLN 164

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy TrEMBL
Match: E5GCU9 (AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.5e-74
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELP+EEDNDDEFSPLNLIRYHLLQD SHSFSTL DFGFKL+F+DF+YVKPS +EEE+PP
Sbjct: 1   MELPVEEDNDDEFSPLNLIRYHLLQD-SHSFSTLRDFGFKLEFEDFEYVKPSEEEEEEPP 60

Query: 61  IQSPKTHPQQQ-----SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120
           IQSPK HP++Q     SPD GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA
Sbjct: 61  IQSPKRHPERQSPRSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120

Query: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGR-KKRRETNLN 160
           ARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR KKRRETNLN
Sbjct: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRKKKRRETNLN 164

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy TrEMBL
Match: A0A1S3ASX7 (ethylene-responsive transcription factor ERF106-like OS=Cucumis melo OX=3656 GN=LOC103482546 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.5e-74
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELP+EEDNDDEFSPLNLIRYHLLQD SHSFSTL DFGFKL+F+DF+YVKPS +EEE+PP
Sbjct: 23  MELPVEEDNDDEFSPLNLIRYHLLQD-SHSFSTLRDFGFKLEFEDFEYVKPSEEEEEEPP 82

Query: 61  IQSPKTHPQQQ-----SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120
           IQSPK HP++Q     SPD GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA
Sbjct: 83  IQSPKRHPERQSPRSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 142

Query: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGR-KKRRETNLN 160
           ARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR KKRRETNLN
Sbjct: 143 ARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRKKKRRETNLN 186

[Close]

BLAST of CSPI05G07450.1 vs. ExPASy TrEMBL
Match: Q75UJ5 (ERF-like protein OS=Cucumis melo OX=3656 GN=CMe-ERF1 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.5e-74
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELP+EEDNDDEFSPLNLIRYHLLQD SHSFSTL DFGFKL+F+DF+YVKPS +EEE+PP
Sbjct: 1   MELPVEEDNDDEFSPLNLIRYHLLQD-SHSFSTLRDFGFKLEFEDFEYVKPSEEEEEEPP 60

Query: 61  IQSPKTHPQQQ-----SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120
           IQSPK HP++Q     SPD GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA
Sbjct: 61  IQSPKRHPERQSPRSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120

Query: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGR-KKRRETNLN 160
           ARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR KKRRETNLN
Sbjct: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRKKKRRETNLN 164

[Close]

BLAST of CSPI05G07450.1 vs. NCBI nr
Match: XP_004143678.1 (ethylene-responsive transcription factor ERF106 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 9.0e-86
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP
Sbjct: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60

Query: 61  IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD 120
           IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD
Sbjct: 61  IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD 120

Query: 121 SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV 161
           SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV
Sbjct: 121 SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLNV 160

[Close]

BLAST of CSPI05G07450.1 vs. NCBI nr
Match: KAE8647921.1 (hypothetical protein Csa_000213 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.1e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP
Sbjct: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60

Query: 61  IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD 120
           IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD
Sbjct: 61  IQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYD 120

Query: 121 SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR
Sbjct: 121 SAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 154

[Close]

BLAST of CSPI05G07450.1 vs. NCBI nr
Match: ADN34298.1 (AP2/ERF domain-containing transcription factor [Cucumis melo subsp. melo] >KAA0055079.1 ethylene-responsive transcription factor ERF106-like protein [Cucumis melo var. makuwa] >BAD01555.1 ERF-like protein [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELP+EEDNDDEFSPLNLIRYHLLQD SHSFSTL DFGFKL+F+DF+YVKPS +EEE+PP
Sbjct: 1   MELPVEEDNDDEFSPLNLIRYHLLQD-SHSFSTLRDFGFKLEFEDFEYVKPSEEEEEEPP 60

Query: 61  IQSPKTHPQQQ-----SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120
           IQSPK HP++Q     SPD GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA
Sbjct: 61  IQSPKRHPERQSPRSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120

Query: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGR-KKRRETNLN 160
           ARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR KKRRETNLN
Sbjct: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRKKKRRETNLN 164

[Close]

BLAST of CSPI05G07450.1 vs. NCBI nr
Match: XP_008436978.1 (PREDICTED: ethylene-responsive transcription factor ERF106-like [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPP 60
           MELP+EEDNDDEFSPLNLIRYHLLQD SHSFSTL DFGFKL+F+DF+YVKPS +EEE+PP
Sbjct: 23  MELPVEEDNDDEFSPLNLIRYHLLQD-SHSFSTLRDFGFKLEFEDFEYVKPSEEEEEEPP 82

Query: 61  IQSPKTHPQQQ-----SPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 120
           IQSPK HP++Q     SPD GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA
Sbjct: 83  IQSPKRHPERQSPRSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDA 142

Query: 121 ARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGR-KKRRETNLN 160
           ARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR KKRRETNLN
Sbjct: 143 ARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRKKKRRETNLN 186

[Close]

BLAST of CSPI05G07450.1 vs. NCBI nr
Match: XP_038877107.1 (ethylene-responsive transcription factor ERF106 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 126/171 (73.68%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MELPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDF------GFKLQFQDFDYVKPSSQ 60
           MELP  E+ +D+FSPL LI+ HLLQDS  SF T  DF        KL+F+ F+Y+KPS  
Sbjct: 1   MELP--EEEEDDFSPLKLIQQHLLQDSD-SFFTFLDFEIHSPPPIKLEFEGFEYLKPS-- 60

Query: 61  EEEDPPIQSPKTHPQQQSP------DDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGT 120
           EEE+PPIQSPK+ P+QQSP      D GRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGT
Sbjct: 61  EEEEPPIQSPKSQPEQQSPRSTTSSDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGT 120

Query: 121 FDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETNLN 160
           FDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGK+DPPPGNGR+KRRE  +N
Sbjct: 121 FDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGKSDPPPGNGRRKRREITVN 166

[Close]

BLAST of CSPI05G07450.1 vs. TAIR 10
Match: AT5G07580.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.6e-32
Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 3   LPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPPIQ 62
           +P +E +     P + +   L  +   S S+ P+               SS  E D   Q
Sbjct: 115 VPKQEPDSPVLDPDSFVNEFLQVEGESSSSSSPELN-----------SSSSTYETD---Q 174

Query: 63  SPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDSA 122
           S K   + +   D R YRGVRRRPWGKFAAEIRDP++KGSR+WLGTF+SDVDAARAYD A
Sbjct: 175 SVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCA 234

Query: 123 AFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           AFK+RGRKA LNFPLDAGK + P  +GRK++R
Sbjct: 235 AFKLRGRKAVLNFPLDAGKYEAPANSGRKRKR 252

[Close]

BLAST of CSPI05G07450.1 vs. TAIR 10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31
Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 52  SSQEEEDPPIQSPKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDS 111
           SS     P +++     + +  ++ R YRGVRRRPWGKFAAEIRDP++KGSR+WLGTF+S
Sbjct: 80  SSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFES 139

Query: 112 DVDAARAYDSAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           D+DAARAYD AAFK+RGRKA LNFPLDAGK D P  + RK+RR
Sbjct: 140 DIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]

BLAST of CSPI05G07450.1 vs. TAIR 10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.5e-27
Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 6   EEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPPIQS-- 65
           ++  + + S L+LI  HLL D    F +L  F   +      +   S+  +  PP+ +  
Sbjct: 6   QQQQEQDQSALDLITQHLLTD----FPSLDTFASTIH-----HCTTSTLSQRKPPLATIA 65

Query: 66  -PKTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDSA 125
            P T P  Q  +D R YRGVRRRPWGK+AAEIRDP++KG RVWLGTFD+ ++AAR YD A
Sbjct: 66  VPTTAPVVQE-NDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKA 125

Query: 126 AFKIRGRKAKLNFPLDAGK 142
           AFK+RG KA LNFPL+AGK
Sbjct: 126 AFKLRGSKAILNFPLEAGK 134

[Close]

BLAST of CSPI05G07450.1 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 )

HSP 1 Score: 118.2 bits (295), Expect = 5.9e-27
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 28  SHSFSTLP-DFGFKLQFQDFDYVKPSSQEEED-----------PPIQ------------- 87
           S  F ++P +F  ++   DFD+ KPS+Q +             PP++             
Sbjct: 78  SMEFLSIPFEFDSEVSVSDFDF-KPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFA 137

Query: 88  SPKTHPQQQSP---DDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAY 147
           +  T P+   P   ++ + YRGVR+RPWGKFAAEIRDP+++GSRVWLGTFD+ ++AARAY
Sbjct: 138 AENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAY 197

Query: 148 DSAAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRR 155
           D AAF++RG KA LNFPL+ GK  P    G KKR+
Sbjct: 198 DEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231

[Close]

BLAST of CSPI05G07450.1 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 68/156 (43.59%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 3   LPLEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGFKLQFQDFDYVKPSSQEEEDPPIQ 62
           LPL+E ND E    +++ Y LL+D+ H  ++  D        DF  VK    E      +
Sbjct: 48  LPLKE-NDSE----DMLVYGLLKDAFHFDTSSSDLSCLF---DFPAVKVEPTENFTAMEE 107

Query: 63  SP-KTHPQQQSPDDGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDS 122
            P K  P  ++    + YRGVR+RPWGKFAAEIRDP++ G+RVWLGTF++  DAA AYD 
Sbjct: 108 KPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDI 167

Query: 123 AAFKIRGRKAKLNFPLDAGKADPPPGNGRKKRRETN 158
           AAF++RG +A LNFPL     +P P     KR  ++
Sbjct: 168 AAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSS 195

The following BLAST results are available for this feature:

BLAST of CSPI05G07450.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LY05	5.1e-31	50.66	Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FKG2	2.5e-30	63.11	Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8VY90	6.4e-26	49.64	Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80341	8.4e-26	44.52	Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40478	8.6e-23	49.59	Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 ...	[more]

BLAST of CSPI05G07450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN33	4.4e-86	100.00	ERF-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167110 PE=4 SV=1	[more]
A0A5A7UNP1	8.5e-74	87.88	Ethylene-responsive transcription factor ERF106-like protein OS=Cucumis melo var...	[more]
E5GCU9	8.5e-74	87.88	AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=41...	[more]
A0A1S3ASX7	8.5e-74	87.88	ethylene-responsive transcription factor ERF106-like OS=Cucumis melo OX=3656 GN=...	[more]
Q75UJ5	8.5e-74	87.88	ERF-like protein OS=Cucumis melo OX=3656 GN=CMe-ERF1 PE=2 SV=1	[more]

BLAST of CSPI05G07450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143678.1	9.0e-86	100.00	ethylene-responsive transcription factor ERF106 [Cucumis sativus]	[more]
KAE8647921.1	6.1e-82	100.00	hypothetical protein Csa_000213 [Cucumis sativus]	[more]
ADN34298.1	1.8e-73	87.88	AP2/ERF domain-containing transcription factor [Cucumis melo subsp. melo] >KAA00...	[more]
XP_008436978.1	1.8e-73	87.88	PREDICTED: ethylene-responsive transcription factor ERF106-like [Cucumis melo]	[more]
XP_038877107.1	1.0e-57	73.68	ethylene-responsive transcription factor ERF106 [Benincasa hispida]	[more]

BLAST of CSPI05G07450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07580.1	3.6e-32	50.66	Integrase-type DNA-binding superfamily protein	[more]
AT5G61590.1	1.8e-31	63.11	Integrase-type DNA-binding superfamily protein	[more]
AT5G51190.1	4.5e-27	49.64	Integrase-type DNA-binding superfamily protein	[more]
AT5G47230.1	5.9e-27	44.52	ethylene responsive element binding factor 5	[more]
AT5G47220.1	1.4e-23	43.59	ethylene responsive element binding factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 118..138 score: 57.92 coord: 79..90 score: 72.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 78..142 e-value: 5.2E-36 score: 135.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 78..128 e-value: 5.1E-14 score: 52.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 78..136 score: 24.526342
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 86..136 e-value: 4.61083E-26 score: 91.9495
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 77..138 e-value: 2.8E-29 score: 103.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..70
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 13..155
None	No IPR available	PANTHER	PTHR31677:SF127	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105	coord: 13..155
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 78..137

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI05G07450	CSPI05G07450	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G07450.1.utr3p1	CSPI05G07450.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G07450.1.cds1	CSPI05G07450.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G07450.1.utr5p1	CSPI05G07450.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI05G07450.1	CSPI05G07450.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009873	ethylene-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity