CSPI04G17080.2 (mRNA) Cucumber (PI 183967) v1

Overview
NameCSPI04G17080.2
TypemRNA
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA exonuclease 4
LocationChr4: 14492639 .. 14494550 (-)
Sequence length1280
RNA-Seq ExpressionCSPI04G17080.2
SyntenyCSPI04G17080.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACACAAATGCTCAGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATCGAGCATATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTGAGATAGTTTTGTGTATCTTTATGGTAATATATCATAACACCATCTCATTATTTCCAGTCTTTTAGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGTAAGTCGCTCTCTATGCATCATATATCATATATGATAAATAATAAGGTTACTGGTAGTTCTCAAAAAAAGAAAAAGGTTTCGGGTAGTTTATATTTTTATATATCAAGTAATTGAGCCATTTATTATGATATCATACATGCATTTCAGAATTTGATTGGGGCTCTGTTTTAGGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGTACTTGTCTGTGGCATTATCTTGTTCTCTAAAGAAGGTTTTAGCTTTTAAAATCTAGCCTATAGATGCTCATTTCCCAGTCATGTTGTAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGTGATTTTTACTAACTTGGTTTGTAATTTTGTGAGGTTTAGTTCACTTTTATTGAAAGTAAAATCCATTTGAACTTTGAAGTGATCTACTGAATTTCGATGCACCAAAAAAAGAAAGAAAAACACTATCAACTACTACTTTTCAACCTTGCACATTATTTTCTCTGGAAATAATTCCCACCATTGAGAGAAACCAACGTATTTTTGCTCTTTTTTCTTTAATCATTTTTCCTTTTTGCTTCGTTTTTTTATTGTTAAATGCACATTATTCATACACCTTTTGCCTGATATTTTTTTGCAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAAGATACATTAACTATGATTCATACTGCTTTAAAGTATGATAAGCAATTTTTTATATTCTTTTTCGAAACGGAGACAAGAACTTCTTTATTAATATGAACTCAAAGTACAAGAGAGTTATACGAAGAGAGCCATAAAGAAGTAGTAATCAAGGGAGTCCTAGAGGGATCAGAAGGTGCGGACATCTCAACTTGGTTGACACCCCCTTAGCGCCAAACATCATATCCTGAGGACAAGCAAGCAAAATAATAAAGAAACAATAATAAAAGCATCAGCTTAGTACAAAGGTCCAAAAAACAGTATGGGACCGGAAGAAAACAACAAGAAACTCGGGAGTGCAGAAAACAAAATAAAACAGGGGGCAATCCTTTGAGGCTTCAAAAGCAGTAGAGGGCGTCGGTCTGTATAATATGCATTGAAACTGAGGCAGCTTAGGATTAGGCAGGTTGTGAAAGAAAAGCAGCCCAATTAAGGTAAATGTCTTGGATGGA

mRNA sequence

AGACACAAATGCTCAGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATCGAGCATATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAAGATACATTAACTATGATTCATACTGCTTTAAAGTATGATAAGCAATTTTTTATATTCTTTTTCGAAACGGAGACAAGAACTTCTTTATTAATATGAACTCAAAGTACAAGAGAGTTATACGAAGAGAGCCATAAAGAAGTAGTAATCAAGGGAGTCCTAGAGGGATCAGAAGGTGCGGACATCTCAACTTGGTTGACACCCCCTTAGCGCCAAACATCATATCCTGAGGACAAGCAAGCAAAATAATAAAGAAACAATAATAAAAGCATCAGCTTAGTACAAAGGTCCAAAAAACAGTATGGGACCGGAAGAAAACAACAAGAAACTCGGGAGTGCAGAAAACAAAATAAAACAGGGGGCAATCCTTTGAGGCTTCAAAAGCAGTAGAGGGCGTCGGTCTGTATAATATGCATTGAAACTGAGGCAGCTTAGGATTAGGCAGGTTGTGAAAGAAAAGCAGCCCAATTAAGGTAAATGTCTTGGATGGA

Coding sequence (CDS)

ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAA

Protein sequence

MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG*
Homology
[Close]
BLAST of CSPI04G17080.2 vs. ExPASy Swiss-Prot
Match: Q4IEV5 (RNA exonuclease 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=REX4 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 0 

Query: 101 IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 160
           IAIDC M G G  G       + +VD     I++++V+P+  +TN+R  V+G+ ++ MR+
Sbjct: 134 IAIDCEMVGVGPGGHESALARVSIVDFHGVQIYDSYVKPKEKVTNWRTAVSGISQKSMRF 193

Query: 161 AMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTAR 220
           A   + VQ ++ KLL              + ++LVGHDL+HDL+ L L++P   +RDTA+
Sbjct: 194 ARDFEEVQAEIDKLL--------------RGRILVGHDLKHDLEALILSHPGKDIRDTAK 253

Query: 221 YHPLMK-TNLVSHSLKYLTRAYLG 244
           +    K  N    SL+ L +  LG
Sbjct: 254 FSGFKKYANGRKPSLRVLAQQLLG 263

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy Swiss-Prot
Match: Q08237 (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 0 

Query: 101 IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 160
           IA+DC   G G +G       I +V+    ++ + FV+P+  +  +R  V+G+K EHM+ 
Sbjct: 122 IAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKN 181

Query: 161 AMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTAR 220
           A+  K  Q+K   +L              + ++LVGH L+HDL+ L L++P  +LRDT+R
Sbjct: 182 AITFKEAQKKTADIL--------------EGRILVGHALKHDLEALMLSHPKSLLRDTSR 241

Query: 221 YHPLMK--TNLVSHSLKYLTRAYL 243
           + P  K      + SLK LTR  L
Sbjct: 242 HLPFRKLYAKGKTPSLKKLTREVL 251

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy Swiss-Prot
Match: Q7S9B7 (RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rex-4 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 0 

Query: 83  TDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIP 142
           TDL+   +  +S+     ++IDC M G G  GA  +     +VD     I++++V+P   
Sbjct: 199 TDLALILQATKSNTLGKYLSIDCEMVGTGPSGATSVLARCSIVDFHGHQIYDSYVRPTAF 258

Query: 143 ITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHD 202
           +T++R  V+G+ + HM  A   ++VQ  V  LL              K ++LVGHD++HD
Sbjct: 259 VTDWRTHVSGISKRHMASARSFESVQATVAALL--------------KGRILVGHDVKHD 318

Query: 203 LDCLRLNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLG 244
           L+ L   +P   +RDTA+Y    K  +    SL+ L +  LG
Sbjct: 319 LEVLGFEHPHRDIRDTAKYSGFRKYGHGPKPSLRVLAKEVLG 346

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-14
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = 0 

Query: 100 AIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMR 159
           A+A+DC M G G  G   +   + +V++  K +++ +V+P  P+T+YR  V+G++ E+++
Sbjct: 243 ALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 302

Query: 160 YAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTA 219
               L+ VQ++V ++L              K ++LVGH L +DL  L L++P   +RDT 
Sbjct: 303 QGEELEVVQKEVAEML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDTQ 362

Query: 220 RYHPLMKTNLVS--HSLKYLTRAYLG 244
           +Y P  K+ + S   SL+ L+   LG
Sbjct: 363 KYKP-FKSQVKSGRPSLRLLSEKILG 373

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy Swiss-Prot
Match: Q4PER6 (RNA exonuclease 4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=REX4 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.5e-14
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 0 

Query: 82  PTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQI 141
           P+D S   +E  +      +AIDC M G G  G+  I   + +V+     I++ FV+PQ 
Sbjct: 122 PSDASSAKKEPGN-----YLAIDCEMVGVGDKGSESILARVSIVNFHGATIYDQFVRPQE 181

Query: 142 PITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEH 201
            +T+YR  V+G++ + ++ A     VQ +V  L+              K K+LVGH +++
Sbjct: 182 KVTDYRTWVSGVRPKDLKGAPSFSQVQGEVANLI--------------KGKVLVGHAIQN 241

Query: 202 DLDCLRLNYPDHMLRDTARYHPLMKTNLVSH-SLKYLTRAYLG 244
           DL  L L++P  ++RDTA + PL       + SLK L +  LG
Sbjct: 242 DLKALLLSHPKVLIRDTATFQPLRDLAKTKYPSLKKLAKLVLG 265

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy TrEMBL
Match: A0A0A0KYE9 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G338960 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 1.9e-141
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy TrEMBL
Match: A0A5D3BBM9 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00940 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.2e-139
Identity = 237/243 (97.53%), Postives = 242/243 (99.59%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy TrEMBL
Match: A0A5A7TPB9 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00150 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.2e-139
Identity = 237/243 (97.53%), Postives = 242/243 (99.59%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IG+LR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy TrEMBL
Match: A0A5A7TYQ2 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G00010 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.5e-126
Identity = 223/243 (91.77%), Postives = 229/243 (94.24%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLR HLMG +       IF   GCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLRVHLMGEIVLC----IF--DGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSD YEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDGYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 237

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 237

[Close]
BLAST of CSPI04G17080.2 vs. ExPASy TrEMBL
Match: A0A6J1DN23 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111022742 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.5e-126
Identity = 213/243 (87.65%), Postives = 231/243 (95.06%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLDG  S
Sbjct: 1   MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRS 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           L++H+DICC+TAPVHQGTSL PTDLSDCY+EDRSDR LGAIA+DCVMAGGGSDG LD+CV
Sbjct: 61  LNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGAIAMDCVMAGGGSDGTLDLCV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
            +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGL EEHMRYAMPLK VQEKVL++L+NGES
Sbjct: 121 GVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGG+A+LLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTR 
Sbjct: 181 IGRLRLNGGRARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRT 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. NCBI nr
Match: XP_011653750.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_011653752.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_031739807.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_031739808.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 3.9e-141
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 94  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 154 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 214 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 273

Query: 241 YLG 244
           YLG
Sbjct: 274 YLG 276

[Close]
BLAST of CSPI04G17080.2 vs. NCBI nr
Match: KAA0045030.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 237/243 (97.53%), Postives = 242/243 (99.59%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IG+LR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. NCBI nr
Match: TYJ96296.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 237/243 (97.53%), Postives = 242/243 (99.59%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. NCBI nr
Match: XP_004142658.1 (apoptosis-enhancing nuclease isoform X2 [Cucumis sativus] >KGN54753.2 hypothetical protein Csa_012744 [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130
Identity = 230/243 (94.65%), Postives = 230/243 (94.65%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPES
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 94  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 154 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 214 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 263

Query: 241 YLG 244
           YLG
Sbjct: 274 YLG 263

[Close]
BLAST of CSPI04G17080.2 vs. NCBI nr
Match: XP_038877626.1 (RNA exonuclease 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 222/243 (91.36%), Postives = 233/243 (95.88%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKH KSFESLREHL GPL KSNCSKIFSE+GCGLCLRVLDGP S
Sbjct: 1   MRVSYHSVHQPRCGVCLKHFKSFESLREHLKGPLPKSNCSKIFSERGCGLCLRVLDGPGS 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQ+ICC+TAPVHQG SL PTDLSDCY EDRSDRG GAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQNICCLTAPVHQGNSLLPTDLSDCYGEDRSDRGHGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIF+TFVQPQIPITNYRHEVTGLKEEHMR+A+PLKNVQEKVLK+LLNGES
Sbjct: 121 WICLVDEDEKLIFSTFVQPQIPITNYRHEVTGLKEEHMRHAIPLKNVQEKVLKILLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240
           I RLR NGGKA+LLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IERLRFNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

Query: 241 YLG 244
           YLG
Sbjct: 241 YLG 243

[Close]
BLAST of CSPI04G17080.2 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-73
Identity = 132/245 (53.88%), Postives = 177/245 (72.24%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 240
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

Query: 241 RAYLG 244
           ++YLG
Sbjct: 276 KSYLG 269

[Close]
BLAST of CSPI04G17080.2 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-73
Identity = 132/245 (53.88%), Postives = 177/245 (72.24%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 240
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

Query: 241 RAYLG 244
           ++YLG
Sbjct: 276 KSYLG 269

[Close]
BLAST of CSPI04G17080.2 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-73
Identity = 132/245 (53.88%), Postives = 177/245 (72.24%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 240
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

Query: 241 RAYLG 244
           ++YLG
Sbjct: 276 KSYLG 269

[Close]
BLAST of CSPI04G17080.2 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-72
Identity = 128/246 (52.03%), Postives = 176/246 (71.54%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           M++SYHS H+P CGVC KHC+SFESLREHL+GPL K  C  IFS +GC  C+ +L+ P S
Sbjct: 34  MKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPKQECKNIFSLRGCRFCMTILESPNS 93

Query: 61  LSDHQDICCITAPVHQG--TSLPPTDLSDCYEED-RSDRGLGAIAIDCVMAGGGSDGALD 120
              HQ+ C  ++ V+ G  T +    L D    D  S R    +A+ C M GGGSDG+LD
Sbjct: 94  RRIHQERCQFSS-VNSGLTTRMAALGLRDKAMIDYTSSRSPRVVALSCKMVGGGSDGSLD 153

Query: 121 ICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLN 180
           +C  +C+ DE + +IF+T+V+P + +T+YR+E TG++ E++R AMPLK VQ K+ + L N
Sbjct: 154 LCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLRDAMPLKQVQRKIQEFLCN 213

Query: 181 GESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYL 240
           GE + ++R  GGKA++LVGH L+HDLD L+L YP  M+RDTA+Y PLMKT+ +S+SLKYL
Sbjct: 214 GEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYL 273

Query: 241 TRAYLG 244
           T+AYLG
Sbjct: 274 TQAYLG 278

[Close]
BLAST of CSPI04G17080.2 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 259.2 bits (661), Expect = 3.3e-69
Identity = 122/246 (49.59%), Postives = 173/246 (70.33%), Query Frame = 0 

Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60
           MR+SYHSVH+P CG+C KHC+SF+SLREHL+GPL K  C  IFS +GC  CL +L+ P +
Sbjct: 25  MRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECKNIFSIRGCRFCLTILESPNA 84

Query: 61  LSDHQDICCITAPVHQGTSLPPTDL---SDCYEEDRSDRGLGAIAIDCVMAGGGSDGALD 120
              HQ+ C + + V  G  +    L   ++   +  S R    +A+ C M GGGSDG+LD
Sbjct: 85  RRIHQERCQL-SNVTSGLMIRMAALGLRNNSTIDYTSSRSPRVVALSCKMVGGGSDGSLD 144

Query: 121 ICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLN 180
           +C  +C+ DE E ++F+T+V+P IP+TNYR+E+TG++ E++R AM LK+ Q KV + L N
Sbjct: 145 LCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCN 204

Query: 181 GESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYL 240
           GE + ++R   GKA++LVGH L++ LD L+L Y   M+RDTA Y PLMK++ +S+SLKYL
Sbjct: 205 GEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYL 264

Query: 241 TRAYLG 244
           T+AYLG
Sbjct: 265 TQAYLG 269

The following BLAST results are available for this feature:
BLAST of CSPI04G17080.2 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4IEV52.0e-1534.72RNA exonuclease 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9... [more]
Q082371.7e-1434.03RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55... [more]
Q7S9B72.2e-1431.48RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708... [more]
Q9GZR22.9e-1432.19RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2[more]
Q4PER68.5e-1431.90RNA exonuclease 4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=REX4 ... [more]
BLAST of CSPI04G17080.2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYE91.9e-141100.00Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G338960... [more]
A0A5D3BBM95.2e-13997.53RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G... [more]
A0A5A7TPB95.2e-13997.53RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001... [more]
A0A5A7TYQ26.5e-12691.77RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G0... [more]
A0A6J1DN236.5e-12687.65RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111022742 PE=3 SV=1[more]
BLAST of CSPI04G17080.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653750.13.9e-141100.00apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_011653752.1 apopto... [more]
KAA0045030.11.1e-13897.53apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa][more]
TYJ96296.11.1e-13897.53apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa][more]
XP_004142658.12.4e-13094.65apoptosis-enhancing nuclease isoform X2 [Cucumis sativus] >KGN54753.2 hypothetic... [more]
XP_038877626.11.7e-12891.36RNA exonuclease 4 isoform X2 [Benincasa hispida][more]
BLAST of CSPI04G17080.2 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G48100.12.9e-7353.88Exonuclease family protein [more]
AT2G48100.22.9e-7353.88Exonuclease family protein [more]
AT2G48100.32.9e-7353.88Exonuclease family protein [more]
AT3G27970.11.8e-7252.03Exonuclease family protein [more]
AT5G40310.13.3e-6949.59Exonuclease family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 99..243
e-value: 8.6E-8
score: 41.9
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 99..243
e-value: 2.0E-31
score: 110.9
NoneNo IPR availablePANTHERPTHR12801RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDcoord: 1..243
NoneNo IPR availablePANTHERPTHR12801:SF123EXONUCLEASE FAMILY PROTEINcoord: 1..243
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 101..242

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI04G17080CSPI04G17080gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G17080.2.utr3p1CSPI04G17080.2.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G17080.2.cds5CSPI04G17080.2.cds5CDS
CSPI04G17080.2.cds4CSPI04G17080.2.cds4CDS
CSPI04G17080.2.cds3CSPI04G17080.2.cds3CDS
CSPI04G17080.2.cds2CSPI04G17080.2.cds2CDS
CSPI04G17080.2.cds1CSPI04G17080.2.cds1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G17080.2.utr5p1CSPI04G17080.2.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI04G17080.2CSPI04G17080.2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008408 3'-5' exonuclease activity