CSPI03G45350.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G45350.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	Chr3: 38800662 .. 38804143 (-)
Sequence length	1020
RNA-Seq Expression	CSPI03G45350.1
Synteny	CSPI03G45350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAGAGAACGAAAGAAAATTGAAAATCTATATAAGGTTTGGAAATACTCGAATTTAATATATATATATAATTAGACCTTTCCACACCCAGAAATGCGTGTTTATATTTTTCAAAACAAATATAACTATTAAACGCTTCGCCAACGCGGCTCTGATCGGAAAATTCCCAATTTGCTTCGATCTCTTACCTTCTTGTTGGACCCCAGGATTCTGAAATTGGTTTTACCGATTCGTCTACTTCCCGTTCCATTCATCACTCCTCGGATTAGGTTTTCATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCATTTTCGCTCCAGGTATTTCTCCTTCTTCTTTCTTGTTAATTTCACGGGTACTATATAATTTTTCCAAGGATTACGAGTGTGGATCATTTTTTGTGTGGAATTTTTCAAATTTTTGCTATATTTACCGGCGTTAAGAATGATGGTTACTCAATTCATGTCACTCAAGTGCAATCGTCTTCCATTGTTTTGGGTATTCAGGGAGGGGCTTAGCACAAGACCGGCGGCTTCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACGTGAGTGAAAAGTTTTTTTCGTTAATCTATGTTACAGCTTTGTACTTGGGTTTATTGAATTGCAAACAAGAACACGCAGCTACCCGATGCTGGTATCTTCATCGGATAACTAGAAATAAAATTTTATTTCGGTGCTCCTATAATATTGGAATTTAGCTACTGTTCAAGGTTGATTTACCTTTATTGGTACTTTGGAATTTGCATTCCTTTTGGTTCCTTTCTTATTTGAGTTTATGAGCTGTAAATGTGGTATAGTTGTATGTGTATGCTTATCTTTGGATTTCATTGTAAAGGCGGTATCAGCCATAGTTGACAGGCATGGTTTTCTTTCTGTGAAGTTTCGTGATTCCCCTCCATTATTTTTTAGATAAGATACCTTACTTCTTGTTATTTAAGAAAAATGAGATATGTGCGACATTGACATTAAACCAGTACAAGCAGAATCCAATTTTATAAGTCTTCGTTTTTACATTTCTCGTCTATTGGCTCATCACCGTTCAAAGTGCATCATAAGCAATGAAAGAAATGCGTACTAATCATGTAACTAGCCTGTTATAAGTTATAATCGTTGGAAGGATACTATTGGGTCTGGATTTCCAAGATACTTATCTATCTGAGAGGATTCATTGACCACTTTTAGCCAGGAACGTGGGATGATGTAAACCTCAAACAGAATTTATTATTAGTACTCTTCAATTAGAAGTTTTAATTGACCTGGAGGCTAATTGCCTGGAGAGAAATCATAGAACATACAAGCAAACAAGAAAGAATCCAATCCAACAGATTAACACACCTAGCTCATAATTACCAAAAGAAAATATTATGGGTAATACTGACAAGGATGGATTAAGCCTAACAAAAGGTTTTTGAGAGTTTGAAAATTGACGTGCACCTCCTCAGGTCAATGTAGGGCTTGATAATTGAGACATCAAACAAACTATTTAGTGGATACTGGTTATTTCAAATGGTTTCTGAGAGAATATTCAATACTTTTCCCTTTGTCAATGGAGGATATACTGCAAGGTTTTATCACCAACTGATCTCTAATTCTAGTGCACCTACCATTGTACATAGGAGCTCAACAAGCCATATGGAGAACAAATGATCCTAAGAATAGGTTTTTCTTTTATGGTTCCTTGTGCTGAACGGCCTTGGCACAGCAAATGGAACTCTTTTCTTGAATATCATTAAAAAAAAGTTCGGATGACCAGAATTCCATCAATTAGTAATCCAAGATTCTAGGCTTTTATTAAATGAAAGAGAGATCCACCAGGTAAAAAATACTATAGATGGAAGATATAAATGGGGAATGGAATGCTTTCTTTATTGTCTTGCAGCTCCTTCTGCTTCATATTAGCAATGTAAGCTCCTCTCTTCTCTTATTGAGGTAAAAAGAACAGACTATGTATTGTTTTCTGTGGTCCAAAAGTTGAATGTCTGGTTGTTGGCTACTTGAATAACAAAAACACGTTAATCTGCAAAAGTAACTTTGTCTGACAACTGGTTGGCTTTTCATTATTATCATTGTCATTATTTTCTCTTCAATGTACAAAACTCGCAGGATCTCCATTTGGCATGTTGGAAAAACCCCACCCTTCTCGCTGTGACATATGATTTCTTGTGGTTCTTCAAAGTTTTATCATAATTGTGCTCTTATTGAAATAAAGTACAGATTATATATGCCAGTTTGTTTACTTATTCCAGATTAATATTTTGATCTTTACTTTATGGTATCTGGTGTAATTGTCATGTGCAGATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGGTACGTAATTGCTTTCTTAATACTGTCCATGGCTGTCATATTTCCACTGGTGTTTTGTATTTTGATTTTTAATTCTTGGTTTTTACTTATTGATGTTCGTACTTGTGAGAAAAAAATTTCAGTCGTGATTATGTGAGAAACTATAAATGACATAATTGTGGAGTAAAAGAAGTCGACAGGGAAAGCAATGGAGAACCACTAACTTTTGAATATCCATTTATTAAAATTATTTTGGAGCACGGATATTTTGTTTTTGTTTTCCTTTTTTGGTAATCCTTTCTAATTTTTAGTTATTTTCTCATTTGCATCTCTAAAACACTAGTCTCTTTTTATTAGATCAATAAAAAGTTACGTTTCATCTTAACAAAACAACAGGTTGCTCCAGGAGATTAAAAGAACTTAACTATAAGAAATCAGTCTCATATTGATTTGCATCAGTTGAATTGAATACTTTTGTAATTGCCGATACGACTTCTCTTCTGACAGATTCAAACTTCTGTTCTTTTTTGTCTTGTTCCAGCAAATGACATTGATAAAAGCTCAGGCGGGGGTGAAGAACAATGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATACATGTGGTCGAAAATGTCCAGAAAATGAATGTTTTTTCTCATTTTGCTCACTATGAATGGAATACAAGTTTTCTGGCCGGCGAAAAGCAGGAAATGATGTCTAAAATACACTGTCACGTCTCAGGTTATAGCATCGGACAGTGATAAAATAGGCTTTTGTTTCTCTTGTAAAAACTTTTGAGTATACTTTTTATACGTCACGATGTAACTTTATAGTATTAATTTATTCATGCCTAAGGTTTTGTTTTTATGGGATAATCGTGTTCAGGTCAGCTTATGCACAACTCGACTATTCATACGAGACAACTCGTTTGATCCTACAACATTTGATTATTAAAGACACTCGTAGTAAATTAGTTTA

mRNA sequence

GTAAAGAGAACGAAAGAAAATTGAAAATCTATATAAGGTTTGGAAATACTCGAATTTAATATATATATATAATTAGACCTTTCCACACCCAGAAATGCGTGTTTATATTTTTCAAAACAAATATAACTATTAAACGCTTCGCCAACGCGGCTCTGATCGGAAAATTCCCAATTTGCTTCGATCTCTTACCTTCTTGTTGGACCCCAGGATTCTGAAATTGGTTTTACCGATTCGTCTACTTCCCGTTCCATTCATCACTCCTCGGATTAGGTTTTCATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCATTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTTCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAGGCGGGGGTGAAGAACAATGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATACATGTGGTCGAAAATGTCCAGAAAATGAATGTTTTTTCTCATTTTGCTCACTATGAATGGAATACAAGTTTTCTGGCCGGCGAAAAGCAGGAAATGATGTCTAAAATACACTGTCACGTCTCAGGTTATAGCATCGGACAGTGATAAAATAGGCTTTTGTTTCTCTTGTAAAAACTTTTGAGTATACTTTTTATACGTCACGATGTAACTTTATAGTATTAATTTATTCATGCCTAAGGTTTTGTTTTTATGGGATAATCGTGTTCAGGTCAGCTTATGCACAACTCGACTATTCATACGAGACAACTCGTTTGATCCTACAACATTTGATTATTAAAGACACTCGTAGTAAATTAGTTTA

Coding sequence (CDS)

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCATTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTTCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAGGCGGGGGTGAAGAACAATGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATACATGTGGTCGAAAATGTCCAGAAAATGA

Protein sequence

MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK*

Homology

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BLAST of CSPI03G45350.1 vs. ExPASy Swiss-Prot
Match: Q8L9S0 (Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.6e-44
Identity = 90/136 (66.18%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A  +RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           +L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+FA
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           L+ FFI+YMWSKM ++
Sbjct: 121 LLLFFILYMWSKMFKR 134

[Close]

BLAST of CSPI03G45350.1 vs. ExPASy Swiss-Prot
Match: Q8VXX9 (Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.2e-43
Identity = 90/138 (65.22%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AA +RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLYGG-AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVV 120
           V++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFIVYMWSKMSRK 137
           FAL+ FF++Y+WSKM ++
Sbjct: 121 FALLVFFVLYIWSKMFKR 137

[Close]

BLAST of CSPI03G45350.1 vs. ExPASy TrEMBL
Match: A0A0A0LHL4 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889980 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSKMSRK
Sbjct: 121 LICFFIVYMWSKMSRK 136

[Close]

BLAST of CSPI03G45350.1 vs. ExPASy TrEMBL
Match: A0A5A7TAQ3 (Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005890 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.2e-65
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMW+KMSRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of CSPI03G45350.1 vs. ExPASy TrEMBL
Match: A0A1S3CQM7 (bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.2e-65
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMW+KMSRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of CSPI03G45350.1 vs. ExPASy TrEMBL
Match: A0A6J1FQQ6 (bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 127/136 (93.38%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSK+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of CSPI03G45350.1 vs. ExPASy TrEMBL
Match: A0A6J1J0M1 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.9e-62
Identity = 126/136 (92.65%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAA +RSREGLSTRP+A+SDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPSAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSK+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of CSPI03G45350.1 vs. NCBI nr
Match: XP_004136265.1 (bet1-like protein At1g29060 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSKMSRK
Sbjct: 121 LICFFIVYMWSKMSRK 136

[Close]

BLAST of CSPI03G45350.1 vs. NCBI nr
Match: XP_008466185.1 (PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like protein [Cucumis melo var. makuwa] >TYK31291.1 bet1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMW+KMSRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of CSPI03G45350.1 vs. NCBI nr
Match: XP_038896659.1 (bet1-like protein At1g29060 [Benincasa hispida])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYN +AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNSNAAAYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSK+SR+
Sbjct: 121 LICFFIVYMWSKISRR 136

[Close]

BLAST of CSPI03G45350.1 vs. NCBI nr
Match: XP_022940948.1 (bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 2.7e-62
Identity = 127/136 (93.38%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSK+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of CSPI03G45350.1 vs. NCBI nr
Match: XP_022980898.1 (bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein At1g29060 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 5.9e-62
Identity = 126/136 (92.65%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S+RGGSSFYNGDAA +RSREGLSTRP+A+SDEIQLQIDPMQGDLDD+IVGLH QVK
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPSAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           RLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           LICFFIVYMWSK+SRK
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of CSPI03G45350.1 vs. TAIR 10
Match: AT1G29060.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 177.9 bits (450), Expect = 5.4e-45
Identity = 90/136 (66.18%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A  +RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120
           +L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+FA
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFA 120

Query: 121 LICFFIVYMWSKMSRK 137
           L+ FFI+YMWSKM ++
Sbjct: 121 LLLFFILYMWSKMFKR 134

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BLAST of CSPI03G45350.1 vs. TAIR 10
Match: AT4G14600.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-44
Identity = 90/138 (65.22%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AA +RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLYGG-AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVV 120
           V++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+R+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFIVYMWSKMSRK 137
           FAL+ FF++Y+WSKM ++
Sbjct: 121 FALLVFFVLYIWSKMFKR 137

The following BLAST results are available for this feature:

BLAST of CSPI03G45350.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S0	7.6e-44	66.18	Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV...	[more]
Q8VXX9	2.2e-43	65.22	Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV...	[more]

BLAST of CSPI03G45350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHL4	6.6e-67	100.00	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A5A7TAQ3	6.2e-65	97.06	Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CQM7	6.2e-65	97.06	bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1	[more]
A0A6J1FQQ6	1.3e-62	93.38	bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 S...	[more]
A0A6J1J0M1	2.9e-62	92.65	bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=...	[more]

BLAST of CSPI03G45350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136265.1	1.4e-66	100.00	bet1-like protein At1g29060 [Cucumis sativus]	[more]
XP_008466185.1	1.3e-64	97.06	PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like pr...	[more]
XP_038896659.1	1.2e-62	94.85	bet1-like protein At1g29060 [Benincasa hispida]	[more]
XP_022940948.1	2.7e-62	93.38	bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein...	[more]
XP_022980898.1	5.9e-62	92.65	bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein...	[more]

BLAST of CSPI03G45350.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29060.1	5.4e-45	66.18	Target SNARE coiled-coil domain protein	[more]
AT4G14600.1	1.6e-44	65.22	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 37..104 e-value: 5.6E-5 score: 32.5
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 42..104 score: 12.077553
None	No IPR available	GENE3D	1.20.5.110		coord: 43..104 e-value: 5.4E-9 score: 37.9
None	No IPR available	PANTHER	PTHR12791:SF51	TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 9..135
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 35..103
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 9..135
IPR039899	BET1, SNARE domain	CDD	cd15853	SNARE_Bet1	coord: 49..103 e-value: 2.86818E-11 score: 53.2754

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G45350	CSPI03G45350	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G45350.1.utr3p1	CSPI03G45350.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G45350.1.cds4	CSPI03G45350.1.cds4	CDS
CSPI03G45350.1.cds3	CSPI03G45350.1.cds3	CDS
CSPI03G45350.1.cds2	CSPI03G45350.1.cds2	CDS
CSPI03G45350.1.cds1	CSPI03G45350.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G45350.1.utr5p1	CSPI03G45350.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G45350.1	CSPI03G45350.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030173	integral component of Golgi membrane