
CSPI03G42020.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCGTTACTTGCCTTGTTTGGGACCCGCCTTGTTCCGTGTGTGTCCGAAATGAACATCTCTTCCTCATTGTATGAATGCCCGTCGACGACAAAGCGCCGCTGAGAAGGATGATTCATTTTTCATTTCCAATACGATTCGGGAACCCTAAAAACCTGCTTAATCCCCAGCCAAATCGTCATCAATCCAAGCTTTTCCATAACCTACCAATGGCGGATGTTCTTCCCAGTTCCAGAAGACCCGTTTGTCCATCCTGCTCGAAACCGGCCCGTATCTGTCTCTGTTCGCGGTTTCGTAGTTCCAGTGTCGACAACTCAGTCGGGGTAATCATTCTTCAGCACAGTTTAGAGAAAAACCATCCGCTTAATTCTGCTAGAATCGTAAAATTAGGTCTCAAGAATGTGGAGATCGCCACCGTTTCCGACGTTAACTTCGAGGCTCGCTTTACTATTCGGCTGCCTGAACCTAATTCCGTAGCACAAAATCTTGATCCTGATATAGAATGTAGTTTCAGAAATGGTCATGGTACGACTCAAAAGCCACAAATTCAGGATGGGTCTATTGTCGATAAACTTAACTGCACAAAAACTAACGAAGGAGCTGCAATTTCTGTTACGATTGGGAAACATGGCGTCGTTAACTCATTCGATCACATCTGGATGCAACTACCGGGTTTTCAGGAGCTTAAAATCAATGAGTTCTTGGCATCTCCAGAAATTAGGGCATCATTAGCAAAAGGGTTCATCGTCAAGAAAATGCAGAAGCGGCAGCTAGTTGAAAGCAAGGGGCTAGAAGAATATGCTGAGTTCGAGATTCAGGTTCCTCCCAAGTCAGTTTTACTTTTTCCCTCTGAAAATGCATTTACTGTAAGTGGTGGTGTTGATGGTAGTGATTTTTATATTAATAATTTGATAGTTTTAGATGGAACATGGGCAAAAGCAAAGAGAATGTACAATGAAAATCCTTGGTTGAGGCTTTTGCCACATATGAAGTTGGACTTAGAGATCATGAGCTTGTATAGTGAAGTGAGACATCAGCCTAAGATTGGTTTTTTGTCCACCATTGAAAGCATTGTCTATGCCTTGAAGCTAATAGGAGATCACCCTGAGGGGCTGGATGATTTGTTGGATGTTTTTGAGTCTATGATAGGAGATCAAAGGAGATGTAAAGATGAGAGGCTCAAAATTACTAGTCAATTTTAAGTTTTTCCTCTCTAATCAAAATGTGCAACCATTAATATGGTTCTCCATGAATGTATATCGACTGACAAGATGCAAGAAGGAGGAAAAATGCTGCTGAAGTAGCACAAGTGGGCCTCTATTGAATTTTCCATGTAAAGCTTTGATTCTCATTTGTCAAAGAGACACATAACTAGATGATCCTTCCCTTCCAAGAAAAAGTGGAAAGTTCACAAACCTTCAGTCATTTCAACTGTAGTGTACTGAGTACTCATCTTAATTTGGCATGAGTTCTAGTTCGTGCTACTTCAATAGAATTATTGATTATTGAACTCATTCCATTCCCTTCAAACAACATCTTGGCATCCAAAGTTGAAGAAACCAAATGGAGCCTTCATTAGTTATATGTTATCCTTTTCACAATCCCTCAAGTGACCAAATTCTCATCCACGGCCTTGCTCTCAGCCAGACACACAGTTTCAAATATCCAGTATGGACTCACCGTTCACTTACTAGCCTTCTTATAGTATGACCTTACACACCAAATGTTTCTAATCTTG CTTCTCGTTACTTGCCTTGTTTGGGACCCGCCTTGTTCCGTGTGTGTCCGAAATGAACATCTCTTCCTCATTGTATGAATGCCCGTCGACGACAAAGCGCCGCTGAGAAGGATGATTCATTTTTCATTTCCAATACGATTCGGGAACCCTAAAAACCTGCTTAATCCCCAGCCAAATCGTCATCAATCCAAGCTTTTCCATAACCTACCAATGGCGGATGTTCTTCCCAGTTCCAGAAGACCCGTTTGTCCATCCTGCTCGAAACCGGCCCGTATCTGTCTCTGTTCGCGGTTTCGTAGTTCCAGTGTCGACAACTCAGTCGGGGTAATCATTCTTCAGCACAGTTTAGAGAAAAACCATCCGCTTAATTCTGCTAGAATCGTAAAATTAGGTCTCAAGAATGTGGAGATCGCCACCGTTTCCGACGTTAACTTCGAGGCTCGCTTTACTATTCGGCTGCCTGAACCTAATTCCGTAGCACAAAATCTTGATCCTGATATAGAATGTAGTTTCAGAAATGGTCATGGTACGACTCAAAAGCCACAAATTCAGGATGGGTCTATTGTCGATAAACTTAACTGCACAAAAACTAACGAAGGAGCTGCAATTTCTGTTACGATTGGGAAACATGGCGTCGTTAACTCATTCGATCACATCTGGATGCAACTACCGGGTTTTCAGGAGCTTAAAATCAATGAGTTCTTGGCATCTCCAGAAATTAGGGCATCATTAGCAAAAGGGTTCATCGTCAAGAAAATGCAGAAGCGGCAGCTAGTTGAAAGCAAGGGGCTAGAAGAATATGCTGAGTTCGAGATTCAGGTTCCTCCCAAGTCAGTTTTACTTTTTCCCTCTGAAAATGCATTTACTGTAAGTGGTGGTGTTGATGGTAGTGATTTTTATATTAATAATTTGATAGTTTTAGATGGAACATGGGCAAAAGCAAAGAGAATGTACAATGAAAATCCTTGGTTGAGGCTTTTGCCACATATGAAGTTGGACTTAGAGATCATGAGCTTGTATAGTGAAGTGAGACATCAGCCTAAGATTGGTTTTTTGTCCACCATTGAAAGCATTGTCTATGCCTTGAAGCTAATAGGAGATCACCCTGAGGGGCTGGATGATTTGTTGGATGTTTTTGAGTCTATGATAGGAGATCAAAGGAGATGTAAAGATGAGAGGCTCAAAATTACTAGTCAATTTTAAGTTTTTCCTCTCTAATCAAAATGTGCAACCATTAATATGGTTCTCCATGAATGTATATCGACTGACAAGATGCAAGAAGGAGGAAAAATGCTGCTGAAGTAGCACAAGTGGGCCTCTATTGAATTTTCCATGTAAAGCTTTGATTCTCATTTGTCAAAGAGACACATAACTAGATGATCCTTCCCTTCCAAGAAAAAGTGGAAAGTTCACAAACCTTCAGTCATTTCAACTGTAGTGTACTGAGTACTCATCTTAATTTGGCATGAGTTCTAGTTCGTGCTACTTCAATAGAATTATTGATTATTGAACTCATTCCATTCCCTTCAAACAACATCTTGGCATCCAAAGTTGAAGAAACCAAATGGAGCCTTCATTAGTTATATGTTATCCTTTTCACAATCCCTCAAGTGACCAAATTCTCATCCACGGCCTTGCTCTCAGCCAGACACACAGTTTCAAATATCCAGTATGGACTCACCGTTCACTTACTAGCCTTCTTATAGTATGACCTTACACACCAAATGTTTCTAATCTTG ATGCCCGTCGACGACAAAGCGCCGCTGAGAAGGATGATTCATTTTTCATTTCCAATACGATTCGGGAACCCTAAAAACCTGCTTAATCCCCAGCCAAATCGTCATCAATCCAAGCTTTTCCATAACCTACCAATGGCGGATGTTCTTCCCAGTTCCAGAAGACCCGTTTGTCCATCCTGCTCGAAACCGGCCCGTATCTGTCTCTGTTCGCGGTTTCGTAGTTCCAGTGTCGACAACTCAGTCGGGGTAATCATTCTTCAGCACAGTTTAGAGAAAAACCATCCGCTTAATTCTGCTAGAATCGTAAAATTAGGTCTCAAGAATGTGGAGATCGCCACCGTTTCCGACGTTAACTTCGAGGCTCGCTTTACTATTCGGCTGCCTGAACCTAATTCCGTAGCACAAAATCTTGATCCTGATATAGAATGTAGTTTCAGAAATGGTCATGGTACGACTCAAAAGCCACAAATTCAGGATGGGTCTATTGTCGATAAACTTAACTGCACAAAAACTAACGAAGGAGCTGCAATTTCTGTTACGATTGGGAAACATGGCGTCGTTAACTCATTCGATCACATCTGGATGCAACTACCGGGTTTTCAGGAGCTTAAAATCAATGAGTTCTTGGCATCTCCAGAAATTAGGGCATCATTAGCAAAAGGGTTCATCGTCAAGAAAATGCAGAAGCGGCAGCTAGTTGAAAGCAAGGGGCTAGAAGAATATGCTGAGTTCGAGATTCAGGTTCCTCCCAAGTCAGTTTTACTTTTTCCCTCTGAAAATGCATTTACTGTAAGTGGTGGTGTTGATGGTAGTGATTTTTATATTAATAATTTGATAGTTTTAGATGGAACATGGGCAAAAGCAAAGAGAATGTACAATGAAAATCCTTGGTTGAGGCTTTTGCCACATATGAAGTTGGACTTAGAGATCATGAGCTTGTATAGTGAAGTGAGACATCAGCCTAAGATTGGTTTTTTGTCCACCATTGAAAGCATTGTCTATGCCTTGAAGCTAATAGGAGATCACCCTGAGGGGCTGGATGATTTGTTGGATGTTTTTGAGTCTATGATAGGAGATCAAAGGAGATGTAAAGATGAGAGGCTCAAAATTACTAGTCAATTTTAA MPVDDKAPLRRMIHFSFPIRFGNPKNLLNPQPNRHQSKLFHNLPMADVLPSSRRPVCPSCSKPARICLCSRFRSSSVDNSVGVIILQHSLEKNHPLNSARIVKLGLKNVEIATVSDVNFEARFTIRLPEPNSVAQNLDPDIECSFRNGHGTTQKPQIQDGSIVDKLNCTKTNEGAAISVTIGKHGVVNSFDHIWMQLPGFQELKINEFLASPEIRASLAKGFIVKKMQKRQLVESKGLEEYAEFEIQVPPKSVLLFPSENAFTVSGGVDGSDFYINNLIVLDGTWAKAKRMYNENPWLRLLPHMKLDLEIMSLYSEVRHQPKIGFLSTIESIVYALKLIGDHPEGLDDLLDVFESMIGDQRRCKDERLKITSQF* Homology
BLAST of CSPI03G42020.1 vs. ExPASy Swiss-Prot
Match: Q9D0U1 (tRNA-uridine aminocarboxypropyltransferase 2 OS=Mus musculus OX=10090 GN=Dtwd2 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.9e-05 Identity = 27/88 (30.68%), Postives = 49/88 (55.68%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy Swiss-Prot
Match: Q8NBA8 (tRNA-uridine aminocarboxypropyltransferase 2 OS=Homo sapiens OX=9606 GN=DTWD2 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 8.5e-05 Identity = 27/88 (30.68%), Postives = 48/88 (54.55%), Query Frame = 0
HSP 2 Score: 42.4 bits (98), Expect = 1.4e-02 Identity = 19/55 (34.55%), Postives = 31/55 (56.36%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy Swiss-Prot
Match: Q4R7M4 (tRNA-uridine aminocarboxypropyltransferase 2 OS=Macaca fascicularis OX=9541 GN=DTWD2 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 8.5e-05 Identity = 27/88 (30.68%), Postives = 48/88 (54.55%), Query Frame = 0
HSP 2 Score: 42.4 bits (98), Expect = 1.4e-02 Identity = 19/55 (34.55%), Postives = 31/55 (56.36%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy TrEMBL
Match: A0A0A0LD09 (tRNA-uridine aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G851850 PE=4 SV=1) HSP 1 Score: 754.2 bits (1946), Expect = 2.6e-214 Identity = 371/374 (99.20%), Postives = 372/374 (99.47%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy TrEMBL
Match: A0A1S3BZW7 (tRNA-uridine aminocarboxypropyltransferase OS=Cucumis melo OX=3656 GN=LOC103495005 PE=4 SV=1) HSP 1 Score: 663.3 bits (1710), Expect = 6.0e-187 Identity = 328/362 (90.61%), Postives = 341/362 (94.20%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy TrEMBL
Match: A0A5A7T5E2 (tRNA-uridine aminocarboxypropyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001820 PE=4 SV=1) HSP 1 Score: 612.1 bits (1577), Expect = 1.6e-171 Identity = 302/329 (91.79%), Postives = 313/329 (95.14%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy TrEMBL
Match: A0A6J1IMF8 (tRNA-uridine aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111476900 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 8.2e-152 Identity = 285/368 (77.45%), Postives = 309/368 (83.97%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. ExPASy TrEMBL
Match: A0A6J1FCX1 (tRNA-uridine aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111442857 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 2.5e-148 Identity = 279/368 (75.82%), Postives = 304/368 (82.61%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. NCBI nr
Match: XP_004150112.3 (uncharacterized protein LOC101217537 [Cucumis sativus] >KGN59885.1 hypothetical protein Csa_002065 [Cucumis sativus]) HSP 1 Score: 754.2 bits (1946), Expect = 5.3e-214 Identity = 371/374 (99.20%), Postives = 372/374 (99.47%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. NCBI nr
Match: XP_008454653.1 (PREDICTED: uncharacterized protein LOC103495005 isoform X1 [Cucumis melo]) HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186 Identity = 328/362 (90.61%), Postives = 341/362 (94.20%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. NCBI nr
Match: KAA0036817.1 (DTW domain-containing protein 2 [Cucumis melo var. makuwa] >TYJ95885.1 DTW domain-containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 612.1 bits (1577), Expect = 3.3e-171 Identity = 302/329 (91.79%), Postives = 313/329 (95.14%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. NCBI nr
Match: XP_038897268.1 (uncharacterized protein LOC120085387 [Benincasa hispida]) HSP 1 Score: 598.6 bits (1542), Expect = 3.7e-167 Identity = 301/366 (82.24%), Postives = 320/366 (87.43%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. NCBI nr
Match: XP_022976533.1 (uncharacterized protein LOC111476900 isoform X1 [Cucurbita maxima]) HSP 1 Score: 546.6 bits (1407), Expect = 1.7e-151 Identity = 285/368 (77.45%), Postives = 309/368 (83.97%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. TAIR 10
Match: AT5G54880.1 (DTW domain-containing protein ) HSP 1 Score: 263.1 bits (671), Expect = 3.5e-70 Identity = 153/359 (42.62%), Postives = 205/359 (57.10%), Query Frame = 0
BLAST of CSPI03G42020.1 vs. TAIR 10
Match: AT2G41750.1 (DTW domain-containing protein ) HSP 1 Score: 44.3 bits (103), Expect = 2.5e-04 Identity = 20/57 (35.09%), Postives = 30/57 (52.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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