CSPI03G38530.3 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G38530.3
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA-(apurinic or apyrimidinic site) endonuclease
Location	Chr3: 33285102 .. 33289998 (+)
Sequence length	1617
RNA-Seq Expression	CSPI03G38530.3
Synteny	CSPI03G38530.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTGTGCTGCAGCTGCCATTTCAAAGCACAAGCGCATCCAGTTCTGGATTCAGTTTGTAACCGTCTAATAGAATTGTAGCTAACTTTCTTATTTATCATTTATGTTCACATTTTTCAGAAGCTTGGGTCTTCTAGCCAAAGGGCTTAAGCGTGATCTTGTAACTGCACTGCAAAGCTTTGTGGAGAATGAAACAGTTGGTATGCATTATTTGTCTTCGAAGGTTGCATTTTTGTACTTCCAAATTTTAAGTGCACTACTACTTGACGTGACCAGTGTTCTACACCATTGAAGATTTGTGAAATATCCCCACTTTTAGTGCTGACTATGATAAATGTAGTTAATTTTGAAGTTGAATTTCATATGAAGTAATATCAGTTTATAGTTTTTGTTCTCAAGCTATAGATCAAGTGATTAACAATCCTCGATTTCTATTGAATTGTAGAATGAGTGAGGAGACTGAGCATATATCTGATGTAGGTGGTTTTATTGATGCAGTAGAAAATCATAGAACACAACAGACAGAGAGAAATTCTAATGTATCAGCTTCTGATGGTGACACGGTGAAAGCTGAAACAAAAATCCTAACACCAAAGGAGAGGCAGTCAGCTGAATCTAACAAGGTTTCAAGTGGTGCAATAGGTAATGCTATCTATCCTTTGAACTCCTCTTTCTTATCTTTAGCATTATTTTTCCCTTTATATACCTCAATACATGCACTTGAGTACTTTGTTTGTTTACTGGTACGGTACACTGACAAAAAGAAATTCTTGCGTAAATGATTTCATTGTAGGCAGTAACCCATCTAGCAGAAAGAGAAAAGATTCCTCAGACGTTGTTTCCAGCATTGTGAAGCAAGAGGATGGAGTAGAGGGGATGCAAAATGAACCATGGGTTGTTCTTGCTCATAAGAAGCCTCAAAAAGGTTGGATCCCGTATAACCCAAGAATCATGAGGCCTAAACCTCTTTCCAAGGATACAAAATCTGTGAAAATTTTATCTTGGAATGTCAATGGGTTAAGAGCCTTACTTAAGGGGTCTTCAGCAGTGGAACTTGCTGAAAGGGAAGATTTTGACGTATTGTGCTTACAGGAGACCAAATTGCAGGCAAGTAGATTAATTCCTATTTCACTTCTACATTTAGTAAATTCTATTATATACACTGGCGAAGTTTCAGGACTTTTGTTTTTACATTGAATCATTTGTCAACATAAAATGATTTTCCTTTATCATTGAATTGTAAGGAACTCAGGGTTTTGCAACAAGGGGTGAAATCATGTAATATTCATTTTTTATTTTTATTTTTTTTGGGGAGAGGGGTGGTGATGTCTTCGGATGATATATGGGAGGGATGAGGTTTAATGCTTCTTTATGGAAGTTGGTTTGCTGATTTTTTTTGTAATTATCAGCTTAGTGTTATTCTTTTGGATTGGAGTCCATTCTTGTTTGTAGTTAGTAGGGACTTGTTTTTTGTAGGCCCATTTCTTTCATTTTTTCAATGAAAGATAGGTTTCTTACCATAGAAAAAGGAAAGGAAAAAAAATAGTAACTTCTGGTTTGGCGGACTTTGCTTTTGGAGAGCAAGGGTGAAAATTTGAAGTATTCAATTGTTTATTCTAGCAATCTTCACTCGTCAGTATCCACATGCCATATCATGAAAAAAAAATGTTAATTTTTCTTCCTTACAAACTGGACTTGAGTTATAATGTCAATTTCGCCTACAGGAAAAGGACATATTAAATATTACAAAATCTCTTGTGGATGGATATCATTATACCTACTGGACGTGCAGCGTTTCTAAACTTGGCTATTCTGGAACTGCAATCATATCCCGGGTATGATTCTCCTTTTCTCATATATGAACAACAATATTTAGACAAGAAAGAATAGCAAATAAACTTGTTATCTTGATCATCTAAAATGCATATATAATGATTAATGAATCACGATCAAGTCCTGGATCCTATTTGTGGTGACCAATTTATGGTATTGATATTCAACTTATAATTTGATTCTGAAAGTTAGTTAGACAAAACCTAAGAAGTGAAGACCATATTCTTGGACGATTTGGCAGTATTGACTATTGAGAGAGGAAGAAGGGGTTCAATTGGATGAAATTTGAAGTGTAGGGTAAAATTTGATACACATTAGTACCTTTCCAAGTTCAGAGTTAAAATTGATCTTTTCCCATTATTTTTTTGTCATTCTTTTGCATATGCTTTATCTTGATATGCTTTCTGAAACTTGGAAATGAAGTCTATATATTATCAAATTAGACAAAATGATCACCTACTGGATGTCTAATGAGTAAGTTGTTATAAATTTTGATTCGACTAGTGTGGTTGGTCTGATGAGATAGGCGAATTGTAAAGTAAAATGCTTTTGAAGCAGTTCGTGGTAGCTATCTTCTTAAGCTACTCAAAAACTTATGATTTTCTTGATTCTATAGGTTGTAGAGCCAGACAAAAGTGTTGTAGAGTCAGGCGATAGTTTTGTAGGTTATTGGTTAAGGTCTGAGTAAGTTGTTTCAGCTGATTTATGAACAAATGATATATTTTTTTTGTAACTTTTCCTTTGACGCTGCTCTTTGCTTCATCATTATAACTTAAATCTTACAAGTTTTTTATTTCAGTGCCAAAAGAAACTACCACCTGCAGACACGTTTAGCTACCGCCATTTATTTTTAAAAATGTTTTCTTGACGGGTGCTTATAATCTGGTGAATAAACTTCTATTACAGATAAAGCCAATTTCAGTTAGATATGGTTTAGGCATATCAGAACATGATGGTGAAGGTCGGGTTGTGATGGTGGAGTTCGATTCTTTTTTTCTATTGAATGTTTATGTTCCTAATTCTGGAGATGGATTGAAGAGACTGGTATGACTTCCCAACTGTGGTTCTTTATTATAGTTTGGTTTATTGCATAGTAACATGAATTCTTGATATCATGGTTATAGATTCTAATTTGAAGCTTCTTGTTGCCTTGCTATCTCTGTTTTCACAAGTCATACAGGATTACCCAGTGGGATCCATCTCTCAGTAACTATATTAAGGTATGCCTTTTTATCTTTTCAGTTTACTTCTTTATCATTCCCAATCTTCCGTAGTTAGGGTGAGTTTGACACGATTTTTTAATGGTGAAATTTGAAAAAGGACTTTAGCCCTTCAAAATTTTCAGTGTTTGGATGATAACTATGAGTGATCTTGAAATCTATAAAAATGTTTGTGGGAGAGACACTTAACTAGTGTTTCCTCTAAAAGTGATTTTTAAACAACACTGGATGTTCCCAAAGTCTTAGTGTGATTGTGGGAGTGGTCAATAGGTGCTTTCAGAATAAGTACTTTTAGCAAACACATTTTAATCATAGGCACTTTATTATAACTATTGAATAACAAACCAGTTTGATGTTTGGCCCTTGTCAAACACTTTGAAATGTGCATTTTTACAAAGCACTTTAAGGTGATTTTGATTTTTGCCAAACATTATTTTTGTATTATTCTCCAATTTAGCGATTTTGATTGGGGGTGTAAAACATTGTTTAGTGCCAAAAAACAAAGCAATCAATTGTTTGCTGTTTCAGTGTATGTATTAACATTTATTGTTAACAACTTGTATAGGAGTTGGAAAAGTCGAAGCCCGTGATTTTGACTGGTGATCTAAATTGTGCACATCAGGAGATAGACCTCTATAATCCTGCGGTAAGCCATCAAATTTAGCTCTCTGAGTTTCTCTCCGCTATTATATCTGAATCCTATAAAATGTAACTAAAATGCAAATTTAAAGCATTTGTTGCTTGTACCATTGGCTTTTGTTACCTTTCTTTATTTGTTGAACTTGTGTGCTTGGATTGAAAAGGGAAACCGAAAAAGTGCTGGTTTCACCAACGAAGAAAGGCAATCATTTGAGACTAACTTTCTGCAAAAGGGGTTTGTTGATACTTTTAGACAAAAGCATCCTGATGTTGTTGGCTATACATATTGGGGTTATCGTCATGGTGGACGCAAAACAAACAAAGGTAACCAAAACTGCTTCTGTTTTTAATTCTCATTTGCTTTACTCTGTTAAAACTCAGCCAGCCCATCTGAAACAAGTGTGATCATCCTATGGGATTCCTCAACTATGAGTAAATTTGGAGAACTTTCCAGTCTAGCACACTTAACTGAACCATTTTCTCTTGACATTTTTGCAACTGGAATTTTATCCTTTTCTATTATCAATTTTGAGCTATTTTTTGTGGGGCATTTTGTTTACGGTCATCAGTATGATAGTAAAACCAAAGTTTGGCGTAAACTTGAGCTCTCTTCATAATTAGGCTTGGACGGCCAATTAGAGATGTTTCTGTAATCCATTGGGGGTAGATGTCTCGATTTCATAATCTCGTTTTATCAATGAAATGAATCTGTTATGCATGTATACATACATATATATATATATAGAAGAAAAAGATAGTAAGGTGAAAGGTTTTTGTGAAACAGGATGGCGGTTGGACTATTTTCTTGTATCAGAGAGGGTGGCAGAGAAGGTACATGACTCTTACATACTCCCCGATGTGGGAGGTAGTGATCACTGTCCCATTGGCCTTGTTCTCAAGCTTTAGCCTTTAGCCTTGCTTCTCCAAAAGAAAGAAAAAAGGAAAACCCTCCCACTTTATGAACCAAGGGGCTCATTTGGCAATCAATATATAGACCTTTTTGTTTCTCCCTCTCTCTCCTTTTGGTTTTCAACAATATATAGATTCATACGTGCATGATCCATTGCAACTTTAGTATACCATGAAAACATGTGTAATTCAAATTTTTTAATATACCACCAACATCTTGAGATGATTTGAAAATTGAATAGGTTTTTGAGAGCAAAGAGAAGATAGAGAACAAAAATAAAGAAGAGAAAAAGGG

mRNA sequence

GTTTGTGTGCTGCAGCTGCCATTTCAAAGCACAAGCGCATCCAGTTCTGGATTCAGTTTGTAACCGTCTAATAGAATTGTAGCTAACTTTCTTATTTATCATTTATGTTCACATTTTTCAGAAGCTTGGGTCTTCTAGCCAAAGGGCTTAAGCGTGATCTTGTAACTGCACTGCAAAGCTTTGTGGAGAATGAAACAGTTGTAGAAAATCATAGAACACAACAGACAGAGAGAAATTCTAATGTATCAGCTTCTGATGGTGACACGGTGAAAGCTGAAACAAAAATCCTAACACCAAAGGAGAGGCAGTCAGCTGAATCTAACAAGGTTTCAAGTGGTGCAATAGGCAGTAACCCATCTAGCAGAAAGAGAAAAGATTCCTCAGACGTTGTTTCCAGCATTGTGAAGCAAGAGGATGGAGTAGAGGGGATGCAAAATGAACCATGGGTTGTTCTTGCTCATAAGAAGCCTCAAAAAGGTTGGATCCCGTATAACCCAAGAATCATGAGGCCTAAACCTCTTTCCAAGGATACAAAATCTGTGAAAATTTTATCTTGGAATGTCAATGGGTTAAGAGCCTTACTTAAGGGGTCTTCAGCAGTGGAACTTGCTGAAAGGGAAGATTTTGACGTATTGTGCTTACAGGAGACCAAATTGCAGGAAAAGGACATATTAAATATTACAAAATCTCTTGTGGATGGATATCATTATACCTACTGGACGTGCAGCGTTTCTAAACTTGGCTATTCTGGAACTGCAATCATATCCCGGATAAAGCCAATTTCAGTTAGATATGGTTTAGGCATATCAGAACATGATGGTGAAGGTCGGGTTGTGATGGTGGAGTTCGATTCTTTTTTTCTATTGAATGTTTATGTTCCTAATTCTGGAGATGGATTGAAGAGACTGTCATACAGGATTACCCAGTGGGATCCATCTCTCAGTAACTATATTAAGGAGTTGGAAAAGTCGAAGCCCGTGATTTTGACTGGTGATCTAAATTGTGCACATCAGGAGATAGACCTCTATAATCCTGCGGGAAACCGAAAAAGTGCTGGTTTCACCAACGAAGAAAGGCAATCATTTGAGACTAACTTTCTGCAAAAGGGGTTTGTTGATACTTTTAGACAAAAGCATCCTGATGTTGTTGGCTATACATATTGGGGTTATCGTCATGGTGGACGCAAAACAAACAAAGGATGGCGGTTGGACTATTTTCTTGTATCAGAGAGGGTGGCAGAGAAGGTACATGACTCTTACATACTCCCCGATGTGGGAGGTAGTGATCACTGTCCCATTGGCCTTGTTCTCAAGCTTTAGCCTTTAGCCTTGCTTCTCCAAAAGAAAGAAAAAAGGAAAACCCTCCCACTTTATGAACCAAGGGGCTCATTTGGCAATCAATATATAGACCTTTTTGTTTCTCCCTCTCTCTCCTTTTGGTTTTCAACAATATATAGATTCATACGTGCATGATCCATTGCAACTTTAGTATACCATGAAAACATGTGTAATTCAAATTTTTTAATATACCACCAACATCTTGAGATGATTTGAAAATTGAATAGGTTTTTGAGAGCAAAGAGAAGATAGAGAACAAAAATAAAGAAGAGAAAAAGGG

Coding sequence (CDS)

ATGTTCACATTTTTCAGAAGCTTGGGTCTTCTAGCCAAAGGGCTTAAGCGTGATCTTGTAACTGCACTGCAAAGCTTTGTGGAGAATGAAACAGTTGTAGAAAATCATAGAACACAACAGACAGAGAGAAATTCTAATGTATCAGCTTCTGATGGTGACACGGTGAAAGCTGAAACAAAAATCCTAACACCAAAGGAGAGGCAGTCAGCTGAATCTAACAAGGTTTCAAGTGGTGCAATAGGCAGTAACCCATCTAGCAGAAAGAGAAAAGATTCCTCAGACGTTGTTTCCAGCATTGTGAAGCAAGAGGATGGAGTAGAGGGGATGCAAAATGAACCATGGGTTGTTCTTGCTCATAAGAAGCCTCAAAAAGGTTGGATCCCGTATAACCCAAGAATCATGAGGCCTAAACCTCTTTCCAAGGATACAAAATCTGTGAAAATTTTATCTTGGAATGTCAATGGGTTAAGAGCCTTACTTAAGGGGTCTTCAGCAGTGGAACTTGCTGAAAGGGAAGATTTTGACGTATTGTGCTTACAGGAGACCAAATTGCAGGAAAAGGACATATTAAATATTACAAAATCTCTTGTGGATGGATATCATTATACCTACTGGACGTGCAGCGTTTCTAAACTTGGCTATTCTGGAACTGCAATCATATCCCGGATAAAGCCAATTTCAGTTAGATATGGTTTAGGCATATCAGAACATGATGGTGAAGGTCGGGTTGTGATGGTGGAGTTCGATTCTTTTTTTCTATTGAATGTTTATGTTCCTAATTCTGGAGATGGATTGAAGAGACTGTCATACAGGATTACCCAGTGGGATCCATCTCTCAGTAACTATATTAAGGAGTTGGAAAAGTCGAAGCCCGTGATTTTGACTGGTGATCTAAATTGTGCACATCAGGAGATAGACCTCTATAATCCTGCGGGAAACCGAAAAAGTGCTGGTTTCACCAACGAAGAAAGGCAATCATTTGAGACTAACTTTCTGCAAAAGGGGTTTGTTGATACTTTTAGACAAAAGCATCCTGATGTTGTTGGCTATACATATTGGGGTTATCGTCATGGTGGACGCAAAACAAACAAAGGATGGCGGTTGGACTATTTTCTTGTATCAGAGAGGGTGGCAGAGAAGGTACATGACTCTTACATACTCCCCGATGTGGGAGGTAGTGATCACTGTCCCATTGGCCTTGTTCTCAAGCTTTAG

Protein sequence

MFTFFRSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPKERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKGWIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL*

Homology

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BLAST of CSPI03G38530.3 vs. ExPASy Swiss-Prot
Match: P45951 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ARP PE=1 SV=2)

HSP 1 Score: 496.9 bits (1278), Expect = 2.2e-139
Identity = 251/428 (58.64%), Postives = 317/428 (74.07%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVS----------ASDGDTV 65
           R LG+  KG K++L++ L+  +++  + +   T  + R+ +V+           ++ +  
Sbjct: 110 RKLGVPVKGRKQELISTLRLHMDS-NLPDQKETSSSTRSDSVTIKRKISNREEPTEDECT 169

Query: 66  KAETKILTPKE---RQSAESN---KVSSGAI----------GSNPSSRKRKDSSDVVSSI 125
            +E   +   E   +QS E N   KVS+ AI          G      K + SS + S +
Sbjct: 170 NSEAYDIEHGEKRVKQSTEKNLKAKVSAKAIAKEQKSLMRTGKQQIQSKEETSSTISSEL 229

Query: 126 VKQEDGVEG-MQNEPWVVLAHKKPQKGWIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRA 185
           +K E+ +    Q+EPW VLAHKKPQK W  YNP+ MRP PL + TK VK+++WNVNGLR 
Sbjct: 230 LKTEEIISSPSQSEPWTVLAHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMTWNVNGLRG 289

Query: 186 LLK--GSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGYSG 245
           LLK    SA++LA+RE+FD+LCLQETKLQ KD+  I K+L+DGY +++W+CSVSKLGYSG
Sbjct: 290 LLKFESFSALQLAQRENFDILCLQETKLQVKDVEEIKKTLIDGYDHSFWSCSVSKLGYSG 349

Query: 246 TAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWD 305
           TAIISRIKP+SVRYG G+S HD EGR+V  EFDSF+L+N YVPNSGDGLKRLSYRI +WD
Sbjct: 350 TAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWD 409

Query: 306 PSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQKGF 365
            +LSN+IKELEKSKPV+LTGDLNCAH+EID++NPAGN++SAGFT EERQSF  N L KGF
Sbjct: 410 RTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGF 469

Query: 366 VDTFRQKHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHC 405
           VDTFR++HP VVGYTYWGYRHGGRKTNKGWRLDYFLVS+ +A  VHDSYILPD+ GSDHC
Sbjct: 470 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHC 529

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy Swiss-Prot
Match: P37454 (Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.5e-74
Identity = 130/260 (50.00%), Postives = 188/260 (72.31%), Query Frame = 0


Query: 146 VKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTYW 205
           +K++SWNVNGLRA+++    +   + ED D++CLQETK+Q+  +      L    ++ YW
Sbjct: 1   MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQV-----DLQPEDYHVYW 60

Query: 206 TCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGL 265
             +V K GYSGTA+ S+ +P+ V YG+G+ EHD EGRV+ +EF++ F++ VY PNS  GL
Sbjct: 61  NYAVKK-GYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGL 120

Query: 266 KRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQ 325
           +R+ YR+ QW+ +L +YI EL++ KPVIL GDLN AHQEIDL NP  NR +AGF+++ER+
Sbjct: 121 ERIDYRM-QWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERE 180

Query: 326 SFETNFLQKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDS 385
           +F T FL+ GFVD+FR  +PD+ G Y++W YR G R  N GWR+DYF+VSE + E++ D+
Sbjct: 181 AF-TRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDA 240

Query: 386 YILPDVGGSDHCPIGLVLKL 405
            I  DV GSDHCP+ L++ +
Sbjct: 241 SISADVMGSDHCPVELIINI 252

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy Swiss-Prot
Match: A0MTA1 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Danio rerio OX=7955 GN=apex1 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.8e-68
Identity = 146/309 (47.25%), Postives = 190/309 (61.49%), Query Frame = 0


Query: 101 KQEDGVEGMQNEPWVVLAHKKPQKGWIPYNPRIMRPKP---LSKDTK--SVKILSWNVNG 160
           K E+GV+G  +      A KK +KG  P  P +    P    SKD +  ++KI SWNV+G
Sbjct: 7   KNEEGVDGEADNG--TAAAKKEKKGKEPEAPILYEDPPEKLTSKDGRAANMKITSWNVDG 66

Query: 161 LRALLKGSSAVELAEREDFDVLCLQETKLQEKDI-LNITKSLVDGYHYTYWTCSVSKLGY 220
           LRA +K  + ++   +ED D+LCLQETK  EK +  +IT   +  Y + YW  S  K GY
Sbjct: 67  LRAWVK-KNGLDWVRKEDPDILCLQETKCAEKALPADITG--MPEYPHKYWAGSEDKEGY 126

Query: 221 SGTAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQ 280
           SG A++ + +P++V YG+G  EHD EGRV+  EF  FFL+  YVPN+  GL RL YR T 
Sbjct: 127 SGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKT- 186

Query: 281 WDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQK 340
           WD     Y+  L+  KP++L GDLN AHQEIDL NP GNRK+AGFT EER+ F T  L+ 
Sbjct: 187 WDVDFRAYLCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGF-TQLLEA 246

Query: 341 GFVDTFRQKHPD-VVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGS 400
           GF D+FR+ +PD    YT+W Y    R  N GWRLDYF++S  +   + DS I     GS
Sbjct: 247 GFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGS 306

Query: 401 DHCPIGLVL 403
           DHCPI L L
Sbjct: 307 DHCPITLFL 308

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy Swiss-Prot
Match: P51173 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Dictyostelium discoideum OX=44689 GN=apeA PE=2 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 7.1e-66
Identity = 124/266 (46.62%), Postives = 179/266 (67.29%), Query Frame = 0


Query: 142 DTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYH 201
           +   +KI+SWNV G +++L      E  E+E+ DVLCLQETK+   +I      +  GY 
Sbjct: 101 EENQMKIISWNVAGFKSVL-SKGFTEYVEKENPDVLCLQETKINPSNIKK--DQMPKGYE 160

Query: 202 YTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNS 261
           Y +      + G+ GT ++++ KP ++ +G+GI++HD EGRV+ +E+D F+++N Y+PN+
Sbjct: 161 YHF--IEADQKGHHGTGVLTKKKPNAITFGIGIAKHDNEGRVITLEYDQFYIVNTYIPNA 220

Query: 262 GD-GLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFT 321
           G  GL+RL YRI +WD     Y+++L  +KP+I  GDLN AH EIDL NP  N+KSAGFT
Sbjct: 221 GTRGLQRLDYRIKEWDVDFQAYLEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFT 280

Query: 322 NEERQSFETNFLQKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERVAE 381
            EER SF +NFL+KG+VD++R  +P   G YT+W Y  GGR  N GWRLDYF+VS+R+ +
Sbjct: 281 IEERTSF-SNFLEKGYVDSYRHFNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMD 340

Query: 382 KVHDS-YILPDVGGSDHCPIGLVLKL 405
            +  S +    V GSDHCPIG+V+ L
Sbjct: 341 SIKISPFHRTSVMGSDHCPIGVVVDL 360

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy Swiss-Prot
Match: A1YES6 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Gorilla gorilla gorilla OX=9595 GN=APEX1 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.7e-63
Identity = 138/311 (44.37%), Postives = 177/311 (56.91%), Query Frame = 0


Query: 103 EDGVEGMQNEPWV---VLAHKKPQKGWIPYNPRIMRPKPLSKDTKS-----VKILSWNVN 162
           EDG E ++ EP       A KK  K      P +    P  K + S     +KI SWNV+
Sbjct: 12  EDGDE-LKTEPEAKKSKTAAKKNDKEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVD 71

Query: 163 GLRALLKGSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGY 222
           GLRA +K    ++  + E  D+LCLQETK  E  +    + L  G  Y YW+    K GY
Sbjct: 72  GLRAWIK-KKGLDWVKEEAPDILCLQETKCSENKLPAELQEL-PGLSYQYWSAPXXKEGY 131

Query: 223 SGTAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQ 282
           SG  ++SR  P+ V YG+G  EHD EGRV++ EFDSF L+  YVPN+G GL RL YR  +
Sbjct: 132 SGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QR 191

Query: 283 WDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQK 342
           WD +   ++K L   KP++L GDLN AH+EIDL NP GN+K+AGFT +ERQ F       
Sbjct: 192 WDEAFRRFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAV 251

Query: 343 GFVDTFRQKHPDV-VGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGS 402
              D+FR  +P+    YT+W Y    R  N GWRLDYFL+S  +   + DS I     GS
Sbjct: 252 PLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGS 311

Query: 403 DHCPIGLVLKL 405
           DHCPI L L L
Sbjct: 312 DHCPITLYLAL 318

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy TrEMBL
Match: A0A0A0LF64 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=Csa_3G824160 PE=3 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 6.8e-229
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK
Sbjct: 103 RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 162

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG
Sbjct: 163 ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 222

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ
Sbjct: 223 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 282

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 283 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 342

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI
Sbjct: 343 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 402

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 403 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 462

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 463 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 501

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy TrEMBL
Match: A0A1S4DUI2 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 6.2e-214
Identity = 372/399 (93.23%), Postives = 387/399 (96.99%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RS+GLLAKGLKRDLV ALQSFVEN TVVEN  TQQTERNS+VSAS GDTVKAETKILTPK
Sbjct: 69  RSVGLLAKGLKRDLVAALQSFVENGTVVENQSTQQTERNSSVSASYGDTVKAETKILTPK 128

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           +RQSAES++VSSGAIGSNPSSRK   SS+VVSSIVKQEDGVEGMQNEPW VLAHKKP+KG
Sbjct: 129 KRQSAESDRVSSGAIGSNPSSRKINGSSEVVSSIVKQEDGVEGMQNEPWAVLAHKKPKKG 188

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFD+LCLQETKLQ
Sbjct: 189 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDILCLQETKLQ 248

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDIL ITKSL+DGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 249 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 308

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNY+KELEK KPVILTGDLNCAHQEI
Sbjct: 309 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 368

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           D+YNPAGNRKSAGFT EERQSFETNFL+KGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 369 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 428

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVS+R+AEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 429 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 467

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy TrEMBL
Match: A0A1S3B8L3 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 6.2e-214
Identity = 372/399 (93.23%), Postives = 387/399 (96.99%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RS+GLLAKGLKRDLV ALQSFVEN TVVEN  TQQTERNS+VSAS GDTVKAETKILTPK
Sbjct: 117 RSVGLLAKGLKRDLVAALQSFVENGTVVENQSTQQTERNSSVSASYGDTVKAETKILTPK 176

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           +RQSAES++VSSGAIGSNPSSRK   SS+VVSSIVKQEDGVEGMQNEPW VLAHKKP+KG
Sbjct: 177 KRQSAESDRVSSGAIGSNPSSRKINGSSEVVSSIVKQEDGVEGMQNEPWAVLAHKKPKKG 236

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFD+LCLQETKLQ
Sbjct: 237 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDILCLQETKLQ 296

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDIL ITKSL+DGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 297 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNY+KELEK KPVILTGDLNCAHQEI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 416

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           D+YNPAGNRKSAGFT EERQSFETNFL+KGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVS+R+AEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 515

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy TrEMBL
Match: A0A1S3B7C7 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 4.5e-212
Identity = 371/399 (92.98%), Postives = 386/399 (96.74%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RS+GLLAKGLKRDLV ALQSFVEN T VEN  TQQTERNS+VSAS GDTVKAETKILTPK
Sbjct: 117 RSVGLLAKGLKRDLVAALQSFVENGT-VENQSTQQTERNSSVSASYGDTVKAETKILTPK 176

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           +RQSAES++VSSGAIGSNPSSRK   SS+VVSSIVKQEDGVEGMQNEPW VLAHKKP+KG
Sbjct: 177 KRQSAESDRVSSGAIGSNPSSRKINGSSEVVSSIVKQEDGVEGMQNEPWAVLAHKKPKKG 236

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFD+LCLQETKLQ
Sbjct: 237 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDILCLQETKLQ 296

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDIL ITKSL+DGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 297 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNY+KELEK KPVILTGDLNCAHQEI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 416

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           D+YNPAGNRKSAGFT EERQSFETNFL+KGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVS+R+AEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 514

[Close]

BLAST of CSPI03G38530.3 vs. ExPASy TrEMBL
Match: A0A5D3DPL5 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007560 PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 9.0e-205
Identity = 362/399 (90.73%), Postives = 377/399 (94.49%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RS+GLLAKGLKRDLV ALQSFVEN TVVEN  TQQTERNS+VSAS GDTVKAETKILTPK
Sbjct: 114 RSVGLLAKGLKRDLVAALQSFVENGTVVENQSTQQTERNSSVSASYGDTVKAETKILTPK 173

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           +RQSAES++VSSGAIGSNPSSRK   SS+VVSSIVKQEDGVEGMQNEPW VLAHKKP+KG
Sbjct: 174 KRQSAESDRVSSGAIGSNPSSRKINGSSEVVSSIVKQEDGVEGMQNEPWAVLAHKKPKKG 233

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFD+LCLQETKLQ
Sbjct: 234 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDILCLQETKLQ 293

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDIL ITKSL+DGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 294 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 353

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNY+KELEK KPVILTGDLNCAHQEI
Sbjct: 354 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 413

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           D+YNPAGNRKSAGFT EERQSFETNFL+KGFVDTFRQKHPDVVGYTYWGYRHGGRKTNK 
Sbjct: 414 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNK- 473

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
                    +R+AEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 474 ---------DRMAEKVHDSYILPDVGGSDHCPIGLVLKL 502

[Close]

BLAST of CSPI03G38530.3 vs. NCBI nr
Match: XP_031739368.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 802.7 bits (2072), Expect = 1.4e-228
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK
Sbjct: 103 RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 162

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG
Sbjct: 163 ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 222

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ
Sbjct: 223 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 282

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 283 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 342

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI
Sbjct: 343 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 402

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 403 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 462

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 463 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 501

[Close]

BLAST of CSPI03G38530.3 vs. NCBI nr
Match: XP_011652215.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5 [Cucumis sativus] >XP_031739369.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5 [Cucumis sativus])

HSP 1 Score: 802.7 bits (2072), Expect = 1.4e-228
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK
Sbjct: 69  RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 128

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG
Sbjct: 129 ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 188

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ
Sbjct: 189 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 248

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 249 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 308

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI
Sbjct: 309 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 368

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 369 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 428

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 429 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 467

[Close]

BLAST of CSPI03G38530.3 vs. NCBI nr
Match: XP_031739365.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 802.7 bits (2072), Expect = 1.4e-228
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK
Sbjct: 117 RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 176

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG
Sbjct: 177 ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 236

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ
Sbjct: 237 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 296

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 297 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 416

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 515

[Close]

BLAST of CSPI03G38530.3 vs. NCBI nr
Match: XP_031739366.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucumis sativus] >KAE8651202.1 hypothetical protein Csa_001367 [Cucumis sativus])

HSP 1 Score: 802.7 bits (2072), Expect = 1.4e-228
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK
Sbjct: 117 RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 176

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG
Sbjct: 177 ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 236

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ
Sbjct: 237 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 296

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 297 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 416

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 515

[Close]

BLAST of CSPI03G38530.3 vs. NCBI nr
Match: XP_031739367.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 796.6 bits (2056), Expect = 1.0e-226
Identity = 398/399 (99.75%), Postives = 398/399 (99.75%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVSASDGDTVKAETKILTPK 65
           RSLGLLAKGLKRDLVTALQSFVENET VENHRTQQTERNSNVSASDGDTVKAETKILTPK
Sbjct: 117 RSLGLLAKGLKRDLVTALQSFVENET-VENHRTQQTERNSNVSASDGDTVKAETKILTPK 176

Query: 66  ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 125
           ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG
Sbjct: 177 ERQSAESNKVSSGAIGSNPSSRKRKDSSDVVSSIVKQEDGVEGMQNEPWVVLAHKKPQKG 236

Query: 126 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 185
           WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ
Sbjct: 237 WIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQ 296

Query: 186 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 245
           EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM
Sbjct: 297 EKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 246 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 305
           VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEI 416

Query: 306 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 365
           DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 366 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 405
           WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 514

[Close]

BLAST of CSPI03G38530.3 vs. TAIR 10
Match: AT2G41460.1 (apurinic endonuclease-redox protein )

HSP 1 Score: 496.9 bits (1278), Expect = 1.5e-140
Identity = 251/428 (58.64%), Postives = 317/428 (74.07%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVS----------ASDGDTV 65
           R LG+  KG K++L++ L+  +++  + +   T  + R+ +V+           ++ +  
Sbjct: 110 RKLGVPVKGRKQELISTLRLHMDS-NLPDQKETSSSTRSDSVTIKRKISNREEPTEDECT 169

Query: 66  KAETKILTPKE---RQSAESN---KVSSGAI----------GSNPSSRKRKDSSDVVSSI 125
            +E   +   E   +QS E N   KVS+ AI          G      K + SS + S +
Sbjct: 170 NSEAYDIEHGEKRVKQSTEKNLKAKVSAKAIAKEQKSLMRTGKQQIQSKEETSSTISSEL 229

Query: 126 VKQEDGVEG-MQNEPWVVLAHKKPQKGWIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRA 185
           +K E+ +    Q+EPW VLAHKKPQK W  YNP+ MRP PL + TK VK+++WNVNGLR 
Sbjct: 230 LKTEEIISSPSQSEPWTVLAHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMTWNVNGLRG 289

Query: 186 LLK--GSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGYSG 245
           LLK    SA++LA+RE+FD+LCLQETKLQ KD+  I K+L+DGY +++W+CSVSKLGYSG
Sbjct: 290 LLKFESFSALQLAQRENFDILCLQETKLQVKDVEEIKKTLIDGYDHSFWSCSVSKLGYSG 349

Query: 246 TAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWD 305
           TAIISRIKP+SVRYG G+S HD EGR+V  EFDSF+L+N YVPNSGDGLKRLSYRI +WD
Sbjct: 350 TAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWD 409

Query: 306 PSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQKGF 365
            +LSN+IKELEKSKPV+LTGDLNCAH+EID++NPAGN++SAGFT EERQSF  N L KGF
Sbjct: 410 RTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGF 469

Query: 366 VDTFRQKHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHC 405
           VDTFR++HP VVGYTYWGYRHGGRKTNKGWRLDYFLVS+ +A  VHDSYILPD+ GSDHC
Sbjct: 470 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHC 529

[Close]

BLAST of CSPI03G38530.3 vs. TAIR 10
Match: AT2G41460.2 (apurinic endonuclease-redox protein )

HSP 1 Score: 252.7 bits (644), Expect = 5.1e-67
Identity = 142/292 (48.63%), Postives = 193/292 (66.10%), Query Frame = 0


Query: 6   RSLGLLAKGLKRDLVTALQSFVENETVVENHRTQQTERNSNVS----------ASDGDTV 65
           R LG+  KG K++L++ L+  +++  + +   T  + R+ +V+           ++ +  
Sbjct: 110 RKLGVPVKGRKQELISTLRLHMDS-NLPDQKETSSSTRSDSVTIKRKISNREEPTEDECT 169

Query: 66  KAETKILTPKE---RQSAESN---KVSSGAI----------GSNPSSRKRKDSSDVVSSI 125
            +E   +   E   +QS E N   KVS+ AI          G      K + SS + S +
Sbjct: 170 NSEAYDIEHGEKRVKQSTEKNLKAKVSAKAIAKEQKSLMRTGKQQIQSKEETSSTISSEL 229

Query: 126 VKQEDGVEG-MQNEPWVVLAHKKPQKGWIPYNPRIMRPKPLSKDTKSVKILSWNVNGLRA 185
           +K E+ +    Q+EPW VLAHKKPQK W  YNP+ MRP PL + TK VK+++WNVNGLR 
Sbjct: 230 LKTEEIISSPSQSEPWTVLAHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMTWNVNGLRG 289

Query: 186 LLK--GSSAVELAEREDFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGYSG 245
           LLK    SA++LA+RE+FD+LCLQETKLQ KD+  I K+L+DGY +++W+CSVSKLGYSG
Sbjct: 290 LLKFESFSALQLAQRENFDILCLQETKLQVKDVEEIKKTLIDGYDHSFWSCSVSKLGYSG 349

Query: 246 TAIISRIKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRL 269
           TAIISRIKP+SVRYG G+S HD EGR+V  EFDSF+L+N YVPNSGDGLKRL
Sbjct: 350 TAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRL 400

[Close]

BLAST of CSPI03G38530.3 vs. TAIR 10
Match: AT3G60950.1 (C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase )

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-29
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 223 IKPISVRYGLGI--SEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSY----RITQWD 282
           IKP+ VRYG G+  S+HD EGR+V  EFDSF+L++ YVPNS DGLK L       I  WD
Sbjct: 502 IKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIEDWD 561

Query: 283 PSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPA 312
            +LSN+IK+LEKSKPV+LTGDLNCAH+EID++NPA
Sbjct: 562 RTLSNHIKDLEKSKPVVLTGDLNCAHEEIDIFNPA 596

[Close]

BLAST of CSPI03G38530.3 vs. TAIR 10
Match: AT3G48425.1 (DNAse I-like superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-25
Identity = 95/313 (30.35%), Postives = 147/313 (46.96%), Query Frame = 0


Query: 147 KILSWNVNG--LRALLKGSSAVELAEREDFDVLCLQETKL-------------------- 206
           K ++WN N   LR     S   +     D DV+ +QE ++                    
Sbjct: 44  KFMTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTK 103

Query: 207 ---QEKDILNITKSLVD---GYHYTYWTCSVSKLGYSGTAIISR--IKPISVRYGLG--I 266
              +EK IL  T++L     G +  +W+ + SK  Y+GTA++ +   KP  V + L    
Sbjct: 104 VLREEKQIL--TRALSSPPFGNYGVWWSLADSK--YAGTALLVKKCFKPRKVYFNLDKLA 163

Query: 267 SEHDGEGRVVMVEFDSFFLLNVYVPNSG-DGLKRLSYRITQWDPSLSNYIKELEKSKPVI 326
           S+H+ +GRV++ EF++F LLN Y PN+G    +    R  +WD  +  ++ +    KP+I
Sbjct: 164 SKHEPDGRVILAEFETFRLLNTYSPNNGWKDEENAFQRRRKWDKRIVEFLNK-TSDKPLI 223

Query: 327 LTGDLNCAHQEIDLYNP------------AGNRKSA---GFTNEERQSFETNFLQKGFVD 386
             GDLN +H+EID+ +P              N++     GFT  ER  F     +   VD
Sbjct: 224 WCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVD 283

Query: 387 TFRQKHPD---VVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAE-----KVHDSYI-LPD 403
            +R  H +     G++ W     G+   K  R+DYFLVSE++ +     K+H   I L  
Sbjct: 284 AYRYLHKEQEMESGFS-WSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEG 343

[Close]

BLAST of CSPI03G38530.3 vs. TAIR 10
Match: AT3G61030.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 82.4 bits (202), Expect = 9.1e-16
Identity = 58/163 (35.58%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 128 PYNPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDVLCLQETKLQEK 187
           P N +  +    +   KSV     N  G    + G++    ++R++ + + +QE K    
Sbjct: 359 PRNKKFQQGLMSNATVKSVPFSINNSKGKELKIVGAAMGSDSDRDEIEAMTVQELK---- 418

Query: 188 DILNITKSLVDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGI--SEHDGEGRVVM 247
              +I  SL   Y + +  C V         I   IKP+ VRYG G+  S+HD EGR+V 
Sbjct: 419 --SHIEASL---YSFRFSCCFV----IVSVDIQILIKPLRVRYGTGLSGSDHDMEGRMVT 478

Query: 248 VEFDSFFLLNVYVPNSGDGLKRLSY----RITQWDPSLSNYIK 285
            EFDSF+L++ YVPNS DGLK L       I  WD +LSN+IK
Sbjct: 479 AEFDSFYLISTYVPNSVDGLKGLVLLKLNAIEDWDRTLSNHIK 508

The following BLAST results are available for this feature:

BLAST of CSPI03G38530.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45951	2.2e-139	58.64	DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis t...	[more]
P37454	5.5e-74	50.00	Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV...	[more]
A0MTA1	5.8e-68	47.25	DNA-(apurinic or apyrimidinic site) endonuclease OS=Danio rerio OX=7955 GN=apex1...	[more]
P51173	7.1e-66	46.62	DNA-(apurinic or apyrimidinic site) endonuclease OS=Dictyostelium discoideum OX=...	[more]
A1YES6	5.7e-63	44.37	DNA-(apurinic or apyrimidinic site) endonuclease OS=Gorilla gorilla gorilla OX=9...	[more]

BLAST of CSPI03G38530.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF64	6.8e-229	100.00	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S4DUI2	6.2e-214	93.23	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3B8L3	6.2e-214	93.23	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3B7C7	4.5e-212	92.98	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3DPL5	9.0e-205	90.73	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of CSPI03G38530.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739368.1	1.4e-228	100.00	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X4 [Cucumis sat...	[more]
XP_011652215.1	1.4e-228	100.00	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5 [Cucumis sat...	[more]
XP_031739365.1	1.4e-228	100.00	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucumis sat...	[more]
XP_031739366.1	1.4e-228	100.00	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucumis sat...	[more]
XP_031739367.1	1.0e-226	99.75	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3 [Cucumis sat...	[more]

BLAST of CSPI03G38530.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41460.1	1.5e-140	58.64	apurinic endonuclease-redox protein	[more]
AT2G41460.2	5.1e-67	48.63	apurinic endonuclease-redox protein	[more]
AT3G60950.1	1.4e-29	64.21	C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase	[more]
AT3G48425.1	1.7e-25	30.35	DNAse I-like superfamily protein	[more]
AT3G61030.1	9.1e-16	35.58	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004808	AP endonuclease 1	TIGRFAM	TIGR00633	TIGR00633	coord: 146..403 e-value: 8.3E-94 score: 311.8
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 107..390
IPR004808	AP endonuclease 1	PROSITE	PS51435	AP_NUCLEASE_F1_4	coord: 146..404 score: 53.623222
None	No IPR available	TIGRFAM	TIGR00195	TIGR00195	coord: 147..401 e-value: 3.4E-78 score: 260.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..86
None	No IPR available	PANTHER	PTHR22748:SF12	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE	coord: 107..390
None	No IPR available	CDD	cd09087	Ape1-like_AP-endo	coord: 147..402 e-value: 4.4968E-151 score: 425.813
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 114..403 e-value: 1.7E-102 score: 345.5
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 147..404
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 149..395 e-value: 3.9E-20 score: 72.5
IPR020848	AP endonuclease 1, conserved site	PROSITE	PS00727	AP_NUCLEASE_F1_2	coord: 338..353
IPR020848	AP endonuclease 1, conserved site	PROSITE	PS00728	AP_NUCLEASE_F1_3	coord: 363..374
IPR020847	AP endonuclease 1, binding site	PROSITE	PS00726	AP_NUCLEASE_F1_1	coord: 174..183

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G38530	CSPI03G38530	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G38530.3.utr5p1	CSPI03G38530.3.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G38530.3.cds1	CSPI03G38530.3.cds1	CDS
CSPI03G38530.3.cds2	CSPI03G38530.3.cds2	CDS
CSPI03G38530.3.cds3	CSPI03G38530.3.cds3	CDS
CSPI03G38530.3.cds4	CSPI03G38530.3.cds4	CDS
CSPI03G38530.3.cds5	CSPI03G38530.3.cds5	CDS
CSPI03G38530.3.cds6	CSPI03G38530.3.cds6	CDS
CSPI03G38530.3.cds7	CSPI03G38530.3.cds7	CDS
CSPI03G38530.3.cds8	CSPI03G38530.3.cds8	CDS
CSPI03G38530.3.cds9	CSPI03G38530.3.cds9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G38530.3.utr3p1	CSPI03G38530.3.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G38530.3	CSPI03G38530.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0033683	nucleotide-excision repair, DNA incision
cellular_component	GO:0042644	chloroplast nucleoid
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0004528	phosphodiesterase I activity