CSPI03G35920.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G35920.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pollen preferential protein
Location	Chr3: 31291013 .. 31292539 (-)
Sequence length	1527
RNA-Seq Expression	CSPI03G35920.1
Synteny	CSPI03G35920.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGATTAATACTAAAAGAAAAGAGAGTTTGAATATTGTTGTTCATGTAATTTCCCACTTTGACTCAATCTTCTTTCTCCAACAAAAGATTAGGTTCATATTTGATTGTAAGAATGGAAATGCATCTCTGTAAACTCTCCCAAATTTATCTCAAACAGAAAATTTCTTTATCTCTTTCTTCTCCAATCTTCCCCATTTATAGGATCTCACCTCCATTTCCTACCACACCCCATTAATTTCTCTCTCAATTCCTTCACAAACCCTCCATTCTTCAGCCTCCATCGCCGCCTTCTTCGCCTTCTCCCCCTCCCTTATCCCTCCCCCCATCCGGACCCCGATTTGCTGTTTCCCAGCAACTCTACTCCGCCGCCGTGATCGCCTCCTCCAATGGCTGCTCCTGCCTTGCTCGCTTTCTCTTAGCCTCCACACATATTTGTGGGAGGAGGAACTCGCGCTTCCATTTCATTCATTTTGATTTTGTTCTTGTTTTGTTCTCTGGTTGATTCCTTCTCCCACAGGAAATCGTTTGAAGATTTGATTTGATTCGAATCGGTTTTGATTGTTTTTTTAGGGTTTTTTTTCTTTTTTTATATATTTTTTATGGAGGAAGTATAGAGAAAGGAGTAAGGGATTAGAGATTTTGAAATTAAAATCTCTCAACTAATTATGTCGAATACGATTATGTTTCGTCCGCCATCGTCGAACCGTCGACAACCATTGTTAACGAGCAAATCTGCTTCCGGAAGTGTTCGGTTCGCGGAGGTAGCTGGCGGAACGACGGCGGAGTGTGCTGCTGTGTGTTGTTGTTGTCCTTGTGTTGTTATAAACTTTCTTGTTCTCGCCATTTACAAGGTTCCGGCTGGACTTTGCCGTCGTGCGTTGAGGACGAAGCGACGGCAGAGGTTGAAGAAAAAGGGAGTTACTCCGGCGAGGCGTGGACGGTTCTCTTTTGGGGGGTATGATGAGACGGATATTCAGATACTTTCGGCGGGAAAATTAGTGTACTCGTCGGAGCCAAGAGGGCAGCAAGCGGTGGAAACAGAGAGGAAAGTGATGGAACTGGAAAAAGAGATGTGGGAGATTTTTTATAGTACTGGGTTTTGGAGAAGCCCTTCACGGAGAGATCAAACTTCGATCTCTCAATGAAAAAATTCTTCTTCTTCTTCCTCTTCTTCTTCATCTCTCTCAATCTGAACCTTCACTGCAAATTTTCCCGGAAAAACAGAAGGAAAAGGAAAGGAAAACTTTGTTGGATCTGTGGTTTGATGATTTGGAAATGGTGGTAGTGGCGAACGGGGTTTTTCATTTCTTGATTGTTTTTGGAATTTTAATTTATTTATTGTGAGCATTCAAGTTCTTCATTTGTTTATTTTGTGGTTGAATTCATGATGTTTGGGTTCCGGGAAAATATTGTACTTTCTCTCATTTTCACCTGGAAATAAAAAATACAAAACAAATAAAAGTGAAAAAGATAAGATTTGGATTTCTTTCATTCCAAAAGTTTTTATTTTTTAATTGTTTAAA

mRNA sequence

GAAAAAGATTAATACTAAAAGAAAAGAGAGTTTGAATATTGTTGTTCATGTAATTTCCCACTTTGACTCAATCTTCTTTCTCCAACAAAAGATTAGGTTCATATTTGATTGTAAGAATGGAAATGCATCTCTGTAAACTCTCCCAAATTTATCTCAAACAGAAAATTTCTTTATCTCTTTCTTCTCCAATCTTCCCCATTTATAGGATCTCACCTCCATTTCCTACCACACCCCATTAATTTCTCTCTCAATTCCTTCACAAACCCTCCATTCTTCAGCCTCCATCGCCGCCTTCTTCGCCTTCTCCCCCTCCCTTATCCCTCCCCCCATCCGGACCCCGATTTGCTGTTTCCCAGCAACTCTACTCCGCCGCCGTGATCGCCTCCTCCAATGGCTGCTCCTGCCTTGCTCGCTTTCTCTTAGCCTCCACACATATTTGTGGGAGGAGGAACTCGCGCTTCCATTTCATTCATTTTGATTTTGTTCTTGTTTTGTTCTCTGGTTGATTCCTTCTCCCACAGGAAATCGTTTGAAGATTTGATTTGATTCGAATCGGTTTTGATTGTTTTTTTAGGGTTTTTTTTCTTTTTTTATATATTTTTTATGGAGGAAGTATAGAGAAAGGAGTAAGGGATTAGAGATTTTGAAATTAAAATCTCTCAACTAATTATGTCGAATACGATTATGTTTCGTCCGCCATCGTCGAACCGTCGACAACCATTGTTAACGAGCAAATCTGCTTCCGGAAGTGTTCGGTTCGCGGAGGTAGCTGGCGGAACGACGGCGGAGTGTGCTGCTGTGTGTTGTTGTTGTCCTTGTGTTGTTATAAACTTTCTTGTTCTCGCCATTTACAAGGTTCCGGCTGGACTTTGCCGTCGTGCGTTGAGGACGAAGCGACGGCAGAGGTTGAAGAAAAAGGGAGTTACTCCGGCGAGGCGTGGACGGTTCTCTTTTGGGGGGTATGATGAGACGGATATTCAGATACTTTCGGCGGGAAAATTAGTGTACTCGTCGGAGCCAAGAGGGCAGCAAGCGGTGGAAACAGAGAGGAAAGTGATGGAACTGGAAAAAGAGATGTGGGAGATTTTTTATAGTACTGGGTTTTGGAGAAGCCCTTCACGGAGAGATCAAACTTCGATCTCTCAATGAAAAAATTCTTCTTCTTCTTCCTCTTCTTCTTCATCTCTCTCAATCTGAACCTTCACTGCAAATTTTCCCGGAAAAACAGAAGGAAAAGGAAAGGAAAACTTTGTTGGATCTGTGGTTTGATGATTTGGAAATGGTGGTAGTGGCGAACGGGGTTTTTCATTTCTTGATTGTTTTTGGAATTTTAATTTATTTATTGTGAGCATTCAAGTTCTTCATTTGTTTATTTTGTGGTTGAATTCATGATGTTTGGGTTCCGGGAAAATATTGTACTTTCTCTCATTTTCACCTGGAAATAAAAAATACAAAACAAATAAAAGTGAAAAAGATAAGATTTGGATTTCTTTCATTCCAAAAGTTTTTATTTTTTAATTGTTTAAA

Coding sequence (CDS)

ATGTCGAATACGATTATGTTTCGTCCGCCATCGTCGAACCGTCGACAACCATTGTTAACGAGCAAATCTGCTTCCGGAAGTGTTCGGTTCGCGGAGGTAGCTGGCGGAACGACGGCGGAGTGTGCTGCTGTGTGTTGTTGTTGTCCTTGTGTTGTTATAAACTTTCTTGTTCTCGCCATTTACAAGGTTCCGGCTGGACTTTGCCGTCGTGCGTTGAGGACGAAGCGACGGCAGAGGTTGAAGAAAAAGGGAGTTACTCCGGCGAGGCGTGGACGGTTCTCTTTTGGGGGGTATGATGAGACGGATATTCAGATACTTTCGGCGGGAAAATTAGTGTACTCGTCGGAGCCAAGAGGGCAGCAAGCGGTGGAAACAGAGAGGAAAGTGATGGAACTGGAAAAAGAGATGTGGGAGATTTTTTATAGTACTGGGTTTTGGAGAAGCCCTTCACGGAGAGATCAAACTTCGATCTCTCAATGA

Protein sequence

MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ*

Homology

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BLAST of CSPI03G35920.1 vs. ExPASy TrEMBL
Match: A0A0A0LGV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G784360 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.8e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ
Sbjct: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 159

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BLAST of CSPI03G35920.1 vs. ExPASy TrEMBL
Match: A0A5D3DQ13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004890 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.7e-77
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIM RPPSSNRRQPLL SKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMLRPPSSNRRQPLLASKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKGV PARRGR+S+GGYDETDIQILSAGK +YSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGVIPARRGRYSYGGYDETDIQILSAGKSLYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QA ETERKVMELEKEMWEIFYSTGFWRSPSRR+QTSISQ
Sbjct: 121 QAEETERKVMELEKEMWEIFYSTGFWRSPSRRNQTSISQ 159

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BLAST of CSPI03G35920.1 vs. ExPASy TrEMBL
Match: A0A1S4DUJ2 (uncharacterized protein LOC103486710 OS=Cucumis melo OX=3656 GN=LOC103486710 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 141/159 (88.68%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIM RPPSSNRRQPLL SKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMLRPPSSNRRQPLLASKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKK            GGYDETDIQILSAGK +YSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKD-----------GGYDETDIQILSAGKSLYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QA ETERKVMELEKEMWEIFYSTGFWRSPSRR+QTSISQ
Sbjct: 121 QAEETERKVMELEKEMWEIFYSTGFWRSPSRRNQTSISQ 148

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BLAST of CSPI03G35920.1 vs. ExPASy TrEMBL
Match: A0A6J1GVU4 (uncharacterized protein LOC111457605 OS=Cucurbita moschata OX=3662 GN=LOC111457605 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSN +MFRPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAI
Sbjct: 1   MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRT+RR  L +KG  P+RRGR S   YDE D+QIL+ GK +++SE +G+
Sbjct: 61  YKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDEADLQILTGGKAMHASELKGK 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
           ++ ETERKVMELE EMWE FY TGFWRSPS+RDQ S S
Sbjct: 121 KSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS 157

[Close]

BLAST of CSPI03G35920.1 vs. ExPASy TrEMBL
Match: A0A6J1F7R8 (uncharacterized protein LOC111441632 OS=Cucurbita moschata OX=3662 GN=LOC111441632 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 110/159 (69.18%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNT+MFRP  SN RQ L+ SKS SG+VRFAEVAGGTTAECAAV CCCPC+ +NFL+LAI
Sbjct: 1   MSNTVMFRPTLSNPRQTLIPSKSVSGTVRFAEVAGGTTAECAAVFCCCPCIAVNFLILAI 60

Query: 61  YKVPAGLCRRALRTKRRQRL-KKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRG 120
           YKVPAGLCRRALRTK RQ + KKK + PAR GRF  G  D+ DIQ+++  K VYS     
Sbjct: 61  YKVPAGLCRRALRTKHRQSVKKKKAIHPARLGRFPGGVLDDGDIQVITMEKTVYSE---- 120

Query: 121 QQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
               E ERKV+ELEKEMW+IFYSTGFWRSPS+RDQ S S
Sbjct: 121 ----EAERKVVELEKEMWDIFYSTGFWRSPSQRDQISSS 151

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BLAST of CSPI03G35920.1 vs. NCBI nr
Match: XP_011652052.1 (uncharacterized protein LOC105434984 [Cucumis sativus] >KGN59241.1 hypothetical protein Csa_001735 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 7.9e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ
Sbjct: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 159

[Close]

BLAST of CSPI03G35920.1 vs. NCBI nr
Match: KAA0043783.1 (uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa] >TYK25350.1 uncharacterized protein E5676_scaffold352G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 7.6e-77
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIM RPPSSNRRQPLL SKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMLRPPSSNRRQPLLASKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKGV PARRGR+S+GGYDETDIQILSAGK +YSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGVIPARRGRYSYGGYDETDIQILSAGKSLYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QA ETERKVMELEKEMWEIFYSTGFWRSPSRR+QTSISQ
Sbjct: 121 QAEETERKVMELEKEMWEIFYSTGFWRSPSRRNQTSISQ 159

[Close]

BLAST of CSPI03G35920.1 vs. NCBI nr
Match: XP_038905288.1 (uncharacterized protein LOC120091362 [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 8.2e-71
Identity = 139/156 (89.10%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIM RPPS+NRRQPLLTSKS SGSVRFAEVAGGTTAECAAVCCCCPCVV+NFLVLAI
Sbjct: 1   MSNTIMLRPPSTNRRQPLLTSKSVSGSVRFAEVAGGTTAECAAVCCCCPCVVLNFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKG  PARR RFS GGYDETDIQILS GK VYSSEP+GQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGAIPARRTRFSGGGYDETDIQILSIGKTVYSSEPKGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTS 157
           ++ ETER+VMELEKEMWEIFYSTGFWRSPS+RDQ S
Sbjct: 121 KSEETERRVMELEKEMWEIFYSTGFWRSPSQRDQIS 156

[Close]

BLAST of CSPI03G35920.1 vs. NCBI nr
Match: XP_016899649.1 (PREDICTED: uncharacterized protein LOC103486710 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68
Identity = 141/159 (88.68%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIM RPPSSNRRQPLL SKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMLRPPSSNRRQPLLASKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKK            GGYDETDIQILSAGK +YSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKD-----------GGYDETDIQILSAGKSLYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QA ETERKVMELEKEMWEIFYSTGFWRSPSRR+QTSISQ
Sbjct: 121 QAEETERKVMELEKEMWEIFYSTGFWRSPSRRNQTSISQ 148

[Close]

BLAST of CSPI03G35920.1 vs. NCBI nr
Match: XP_022955715.1 (uncharacterized protein LOC111457605 [Cucurbita moschata] >KAG6571296.1 hypothetical protein SDJN03_30211, partial [Cucurbita argyrosperma subsp. sororia] >KAG6596639.1 hypothetical protein SDJN03_09819, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028178.1 hypothetical protein SDJN02_09358, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSN +MFRPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAI
Sbjct: 1   MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRT+RR  L +KG  P+RRGR S   YDE D+QIL+ GK +++SE +G+
Sbjct: 61  YKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDEADLQILTGGKAMHASELKGK 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
           ++ ETERKVMELE EMWE FY TGFWRSPS+RDQ S S
Sbjct: 121 KSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS 157

[Close]

BLAST of CSPI03G35920.1 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 77/186 (41.40%), Postives = 99/186 (53.23%), Query Frame = 0


Query: 2   SNTIMFRPPSSNRRQPLLTSKSASGSVRF-------AEVAGGTTAECAAVCCCCPCVVIN 61
           S+T    P  SNRRQPLL    +S S R        AE  GGTTA CAAV CCCPC ++N
Sbjct: 19  SDTPSSSPSRSNRRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVN 78

Query: 62  FLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPA--------------RRGRFSFGGYDE 121
            LVLAIYKVP G+CRRA+R++RR++L K G+ P               +   F+    D 
Sbjct: 79  LLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDS 138

Query: 122 TDI----------QILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPS 157
            D+           +   GK V +     ++  E +  V+ LEKEMW  FY  GFWRSPS
Sbjct: 139 DDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPS 198

[Close]

BLAST of CSPI03G35920.1 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 63/142 (44.37%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 15  RQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRT 74
           R+ L T     G    AE  GGTTA CAA+C C PC V+N +VLA+YK+P GLCRRA+R 
Sbjct: 8   RRSLSTPSLCGGGSTTAECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRR 67

Query: 75  KRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQQAVETERKVMELEK 134
            RR+RL KK    + R  F  GG  +  +  L        S    ++  E +  V+ LEK
Sbjct: 68  IRRKRLAKKEFVESGR-EFGRGGSSQFAVHPL-------ESRDEEEEEEEEDEAVIALEK 127

Query: 135 EMWEIFYSTGFWRSPSRRDQTS 157
           EMW  FYS GFWRS S+ +  S
Sbjct: 128 EMWSRFYSGGFWRSLSQAETAS 141

[Close]

BLAST of CSPI03G35920.1 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 5.9e-19
Identity = 57/154 (37.01%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 11  SSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRR 70
           S+ R  P  T+  +    +  EVAGG  AECAAV CCCPC V+N +VLA+YKVPA +C++
Sbjct: 18  STMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVVNLMVLAVYKVPAAVCKK 77

Query: 71  ALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQI--------LSAGKLVYSSEPRGQQA 130
           A R  +R+R  +K     R G  +    + ++  +        L+A  +       G + 
Sbjct: 78  AWRRSKRRRFTRK-----RHGLLASATAEGSESTVHARLNEEDLTAEIVFEECHVSGGEL 137

Query: 131 VETERKVMELEKEMWEIFYSTGFWRSPSRRDQTS 157
                 V+ LE EM + FY  GFWRSPS++D +S
Sbjct: 138 ----NDVVRLENEMLDRFYGAGFWRSPSQKDTSS 162

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BLAST of CSPI03G35920.1 vs. TAIR 10
Match: AT5G14690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.4e-04
Identity = 30/74 (40.54%), Postives = 39/74 (52.70%), Query Frame = 0


Query: 27  SVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVT 86
           S R    A    A+C A+ CCCPC +IN L L + KVP  + RR L    R + KK+ V 
Sbjct: 45  SKRCRSWAAAAIADCVAL-CCCPCAIINLLTLTLVKVPWMIGRRCLGGGGRNK-KKRRVI 104

Query: 87  PARRGRFSFGGYDE 101
             R+ R +  G DE
Sbjct: 105 HRRKRRGNINGEDE 116

The following BLAST results are available for this feature:

BLAST of CSPI03G35920.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G35920.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGV0	3.8e-82	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G784360 PE=4 SV=1	[more]
A0A5D3DQ13	3.7e-77	94.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DUJ2	1.1e-68	88.68	uncharacterized protein LOC103486710 OS=Cucumis melo OX=3656 GN=LOC103486710 PE=...	[more]
A0A6J1GVU4	1.8e-55	72.15	uncharacterized protein LOC111457605 OS=Cucurbita moschata OX=3662 GN=LOC1114576...	[more]
A0A6J1F7R8	1.0e-50	69.18	uncharacterized protein LOC111441632 OS=Cucurbita moschata OX=3662 GN=LOC1114416...	[more]

BLAST of CSPI03G35920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652052.1	7.9e-82	100.00	uncharacterized protein LOC105434984 [Cucumis sativus] >KGN59241.1 hypothetical ...	[more]
KAA0043783.1	7.6e-77	94.34	uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa] >TYK...	[more]
XP_038905288.1	8.2e-71	89.10	uncharacterized protein LOC120091362 [Benincasa hispida]	[more]
XP_016899649.1	2.2e-68	88.68	PREDICTED: uncharacterized protein LOC103486710 [Cucumis melo]	[more]
XP_022955715.1	3.7e-55	72.15	uncharacterized protein LOC111457605 [Cucurbita moschata] >KAG6571296.1 hypothet...	[more]

BLAST of CSPI03G35920.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11690.1	6.3e-29	41.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G06380.1	2.3e-23	44.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G27180.1	5.9e-19	37.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G14690.1	2.4e-04	40.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264:SF8	EXPRESSED PROTEIN	coord: 8..155
None	No IPR available	PANTHER	PTHR33264	EXPRESSED PROTEIN	coord: 8..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G35920	CSPI03G35920	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G35920.1.utr3p1	CSPI03G35920.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G35920.1.cds1	CSPI03G35920.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G35920.1.utr5p1	CSPI03G35920.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G35920.1	CSPI03G35920.1-protein	polypeptide