CSPI03G31890.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G31890.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein NRT1/ PTR FAMILY 5.6
Location	Chr3: 28670656 .. 28672077 (+)
Sequence length	426
RNA-Seq Expression	CSPI03G31890.1
Synteny	CSPI03G31890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGTATAATATTGATGATCAAGTTTGGGTTAATGACTCTTCTGTTAATCACGAAGGAAATCTTCTCTTCGAGAGCTTCCACCCGCGTTCCAAAACCTTCCCTCTTCATATCATTGGTAACTTTTTTTTTTTTTTTAAATAGTATCCTTTTTGCCTAAGATTTATATAGTGCACTAAGATTTACCAAGATAGTTAAGCACCCGTTTTGGAGTGCATAAGTTCTTGATTTAGGAAAAGGATTGTAATTAATTAATGAAATTAATCATAATTAAAGAATAAACACACATTTCTTCTGCTGTTCTTTTTGTTTTCCCACTGTTCTTAGTCTTATTTTGATAAACATAAGACGATAACAATAAATAAGTATCAAATTTATAATAAGAGTCTAATGTTAAGTTTTTGGAGAAAAATGTTTAGTTTGGTTAATTTTTAATCAGTGTCTAATGCTGTGTAGAGAGTACAAACTTGAGATCTCTATTGAAGGAAGTCCAAAACCTAATCTCTCTCCTAGAAAGATGATAATTTACTTGAGGAGAAATAACAAGTGCTCAAATCCAAACTCTTTGTTAGAGAAGATACAAAAATGCTTCTTATAGAAGAAGGATACAAAATGCTCCATAGAGAAGAAGGATACAAAATACTCCATAGAGAAGAAGGATACACATGATAAAATACTTCTTAGAGAAAGAGTTCTTAGAGAAGAAGATACGTGAAATTCATTTATTTTGTGTGAAGAGGATACGTGTAGAGAAGAGGAGAAATTCACACACTTCCATACATCTCTCTCTACCCCAATACTAAAGAAAGATGAAAATAAATAATCAGTTGGAAACGATCAACTGAAAATTAGGGGAAAGATTAAATTATCTATAAATATTAGCGTTGAATTGGACTCATTTAGTAAATATATTTTGATATCTGATGTGTAGAAAAATAGGGATTATTTTTGCTTACACTGTCAACTTTGGTACCAAGTTTAAAGCCATGCGATGGTGAAACATGTGAGGAGCCCAGAAAAGTACGTGAAAGTCTATTCTTCACAGCAATTTACTTAATCTCCATAGGAACTGGAGGCCACAAACTATCTCTGGAGAGTTTCGGGACCGACCAATTCGACGACGACCACCCCGAAGAAAGAAAGCAAAAGATGTCGTTTTTCAATTGGTGGAACTCTGGTCTTTTCGCTGGTATTATCTTTGGAGTCACTTTAAATTTGTACGTTCAAGAATATGTAGGATATATGGGGAATCGGTGGCGTGATTCTCACTTCGGTTATGGCTATTTCTCTTGCAATATTCCTTCTTGGAAGGCCAGTTTATAGGCGCAGGGCATCATTAGGAAGCCCTTTAACTCCTCTGCTTCAGGTTATTGTTGCTGCTTTTAGGAACAGGAAATTGGGTTACCCTTTCACATTCTTC

mRNA sequence

ATGAAGGGTATAATATTGATGATCAAGTTTGGGTTAATGACTCTTCTGTTAATCACGAAGGAAATCTTCTCTTCGAGAGCTTCCACCCGCGTTCCAAAACCTTCCCTCTTCATATCATTGGAACTGGAGGCCACAAACTATCTCTGGAGAGTTTCGGGACCGACCAATTCGACGACGACCACCCCGAAGAAAGAAAGCAAAAGATGTCGTTTTTCAATTGGTGGAACTCTGGTCTTTTCGCTGGATATATGGGGAATCGGTGGCGTGATTCTCACTTCGGTTATGGCTATTTCTCTTGCAATATTCCTTCTTGGAAGGCCAGTTTATAGGCGCAGGGCATCATTAGGAAGCCCTTTAACTCCTCTGCTTCAGGTTATTGTTGCTGCTTTTAGGAACAGGAAATTGGGTTACCCTTTCACATTCTTC

Coding sequence (CDS)

ATGAAGGGTATAATATTGATGATCAAGTTTGGGTTAATGACTCTTCTGTTAATCACGAAGGAAATCTTCTCTTCGAGAGCTTCCACCCGCGTTCCAAAACCTTCCCTCTTCATATCATTGGAACTGGAGGCCACAAACTATCTCTGGAGAGTTTCGGGACCGACCAATTCGACGACGACCACCCCGAAGAAAGAAAGCAAAAGATGTCGTTTTTCAATTGGTGGAACTCTGGTCTTTTCGCTGGATATATGGGGAATCGGTGGCGTGATTCTCACTTCGGTTATGGCTATTTCTCTTGCAATATTCCTTCTTGGAAGGCCAGTTTATAGGCGCAGGGCATCATTAGGAAGCCCTTTAACTCCTCTGCTTCAGGTTATTGTTGCTGCTTTTAGGAACAGGAAATTGGGTTACCCTTTCACATTCTTC

Protein sequence

MKGIILMIKFGLMTLLLITKEIFSSRASTRVPKPSLFISLELEATNYLWRVSGPTNSTTTTPKKESKRCRFSIGGTLVFSLDIWGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYPFTFF

Homology

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy Swiss-Prot
Match: P0CI03 (Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-12
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+ G+ILT VMAISL IF +G+P YR R   GSPLTP+LQV VAA   R L YP
Sbjct: 223 WGVAGIILTVVMAISLIIFFIGKPFYRYRTPSGSPLTPILQVFVAAIAKRNLPYP 277

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy Swiss-Prot
Match: Q9M331 (Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+  +ILT VMA S  IF +G+P YR RA  GSPLTP+LQV VAA   R L  P
Sbjct: 222 WGVASIILTIVMATSFFIFRIGKPFYRYRAPSGSPLTPMLQVFVAAIAKRNLPCP 276

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy Swiss-Prot
Match: Q93Z20 (Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+G +I T  M +S+A F +G P+YR +   GSP+T + QV+VAA+R  KL  P
Sbjct: 242 WGLGFLIPTVFMGVSIASFFIGTPLYRFQKPGGSPITRVCQVLVAAYRKLKLNLP 296

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy Swiss-Prot
Match: Q9LYR6 (Protein NRT1/ PTR FAMILY 6.1 OS=Arabidopsis thaliana OX=3702 GN=NPF6.1 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-05
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 72  SIGGTLVFSLDI-------WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQ 131
           ++G  + F+L +       WG+    L   M IS A+F  G P+YR R   GSPLT + Q
Sbjct: 239 TLGAIIAFTLVVYVQMELGWGMAFGTLAVAMGISNALFFAGTPLYRHRLPGGSPLTRVAQ 298

Query: 132 VIVAAFRNRKLGYPFTFF 143
           V+VAAFR R   +  + F
Sbjct: 299 VLVAAFRKRNAAFTSSEF 316

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy Swiss-Prot
Match: Q9SZY4 (Protein NRT1/ PTR FAMILY 6.2 OS=Arabidopsis thaliana OX=3702 GN=NPF6.2 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.2e-05
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           W  G  I T  MAI++ IFL G   YR + S GSP+  + QVI AAFR RK+  P
Sbjct: 214 WAYG--ICTVSMAIAIVIFLCGTKRYRYKKSQGSPVVQIFQVIAAAFRKRKMELP 266

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy TrEMBL
Match: A0A0A0LAE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733330 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 13  MTLLLITKEIFSSRASTRVPKPSLFISLELEATNYLWRVSGPTNSTTTTPKKESKRCRFS 72
           MTLLLITKEIFSSRASTRVPKPSLFISLELEATN+LWRVSGPTNSTTTTPKKESK   FS
Sbjct: 1   MTLLLITKEIFSSRASTRVPKPSLFISLELEATNHLWRVSGPTNSTTTTPKKESK--SFS 60

Query: 73  IGGTLVFSLDIWGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRN 132
           IGGTLVFSLDIWG+GGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRN
Sbjct: 61  IGGTLVFSLDIWGMGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRN 120

Query: 133 RKLGYPFTFF 143
           RKLGYPFTFF
Sbjct: 121 RKLGYPFTFF 128

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy TrEMBL
Match: A0A5D3DNB8 (Protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001300 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA  GSPLTPLLQVI+AAFR RKL YP
Sbjct: 129 WGMGGVILTSVMAISLAIFLLGRPVYRYRAPSGSPLTPLLQVIIAAFRKRKLDYP 183

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy TrEMBL
Match: A0A5A7TPU6 (Protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004790 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA  GSPLTPLLQVI+AAFR RKL YP
Sbjct: 216 WGMGGVILTSVMAISLAIFLLGRPVYRYRAPSGSPLTPLLQVIIAAFRKRKLDYP 270

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy TrEMBL
Match: A0A6J1CUS4 (protein NRT1/ PTR FAMILY 5.6-like OS=Momordica charantia OX=3673 GN=LOC111014971 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+ GVILTSVMAISLAIFLLGRPVYR RA LGSPLTPLLQV+VAAFRNR L YP
Sbjct: 230 WGVSGVILTSVMAISLAIFLLGRPVYRFRAPLGSPLTPLLQVLVAAFRNRNLPYP 284

[Close]

BLAST of CSPI03G31890.1 vs. ExPASy TrEMBL
Match: A0A1S3B6K9 (protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo OX=3656 GN=LOC103486351 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA  GSPLTPLLQVI+AAFR RKL YP
Sbjct: 225 WGMGGVILTSVMAISLAIFLLGRPVYRYRAPSGSPLTPLLQVIIAAFRKRKLDYP 279

[Close]

BLAST of CSPI03G31890.1 vs. NCBI nr
Match: XP_031737503.1 (protein NRT1/ PTR FAMILY 5.6 [Cucumis sativus] >KAE8650995.1 hypothetical protein Csa_001365 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-18
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA LGSPLTPLLQVIVAAFRNRKLGYP
Sbjct: 225 WGMGGVILTSVMAISLAIFLLGRPVYRFRAPLGSPLTPLLQVIVAAFRNRKLGYP 279

[Close]

BLAST of CSPI03G31890.1 vs. NCBI nr
Match: KAA0044126.1 (protein NRT1/ PTR FAMILY 5.6 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA  GSPLTPLLQVI+AAFR RKL YP
Sbjct: 216 WGMGGVILTSVMAISLAIFLLGRPVYRYRAPSGSPLTPLLQVIIAAFRKRKLDYP 270

[Close]

BLAST of CSPI03G31890.1 vs. NCBI nr
Match: XP_022145545.1 (protein NRT1/ PTR FAMILY 5.6-like [Momordica charantia])

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+ GVILTSVMAISLAIFLLGRPVYR RA LGSPLTPLLQV+VAAFRNR L YP
Sbjct: 230 WGVSGVILTSVMAISLAIFLLGRPVYRFRAPLGSPLTPLLQVLVAAFRNRNLPYP 284

[Close]

BLAST of CSPI03G31890.1 vs. NCBI nr
Match: TYK25012.1 (protein NRT1/ PTR FAMILY 5.6 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA  GSPLTPLLQVI+AAFR RKL YP
Sbjct: 129 WGMGGVILTSVMAISLAIFLLGRPVYRYRAPSGSPLTPLLQVIIAAFRKRKLDYP 183

[Close]

BLAST of CSPI03G31890.1 vs. NCBI nr
Match: XP_008442499.1 (PREDICTED: protein NRT1/ PTR FAMILY 5.6 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-16
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+GGVILTSVMAISLAIFLLGRPVYR RA  GSPLTPLLQVI+AAFR RKL YP
Sbjct: 225 WGMGGVILTSVMAISLAIFLLGRPVYRYRAPSGSPLTPLLQVIIAAFRKRKLDYP 279

[Close]

BLAST of CSPI03G31890.1 vs. TAIR 10
Match: AT2G37900.1 (Major facilitator superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+ G+ILT VMAISL IF +G+P YR R   GSPLTP+LQV VAA   R L YP
Sbjct: 223 WGVAGIILTVVMAISLIIFFIGKPFYRYRTPSGSPLTPILQVFVAAIAKRNLPYP 277

[Close]

BLAST of CSPI03G31890.1 vs. TAIR 10
Match: AT3G53960.1 (Major facilitator superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 9.0e-11
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+  +ILT VMA S  IF +G+P YR RA  GSPLTP+LQV VAA   R L  P
Sbjct: 222 WGVASIILTIVMATSFFIFRIGKPFYRYRAPSGSPLTPMLQVFVAAIAKRNLPCP 276

[Close]

BLAST of CSPI03G31890.1 vs. TAIR 10
Match: AT1G62200.1 (Major facilitator superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.3e-08
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           WG+G +I T  M +S+A F +G P+YR +   GSP+T + QV+VAA+R  KL  P
Sbjct: 242 WGLGFLIPTVFMGVSIASFFIGTPLYRFQKPGGSPITRVCQVLVAAYRKLKLNLP 296

[Close]

BLAST of CSPI03G31890.1 vs. TAIR 10
Match: AT5G13400.1 (Major facilitator superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 72  SIGGTLVFSLDI-------WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQ 131
           ++G  + F+L +       WG+    L   M IS A+F  G P+YR R   GSPLT + Q
Sbjct: 239 TLGAIIAFTLVVYVQMELGWGMAFGTLAVAMGISNALFFAGTPLYRHRLPGGSPLTRVAQ 298

Query: 132 VIVAAFRNRKLGYPFTFF 143
           V+VAAFR R   +  + F
Sbjct: 299 VLVAAFRKRNAAFTSSEF 316

[Close]

BLAST of CSPI03G31890.1 vs. TAIR 10
Match: AT2G26690.1 (Major facilitator superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 5.1e-06
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 84  WGIGGVILTSVMAISLAIFLLGRPVYRRRASLGSPLTPLLQVIVAAFRNRKLGYP 139
           W  G  I T  MAI++ IFL G   YR + S GSP+  + QVI AAFR RK+  P
Sbjct: 214 WAYG--ICTVSMAIAIVIFLCGTKRYRYKKSQGSPVVQIFQVIAAAFRKRKMELP 266

The following BLAST results are available for this feature:

BLAST of CSPI03G31890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CI03	2.7e-12	63.64	Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1	[more]
Q9M331	1.3e-09	58.18	Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2	[more]
Q93Z20	1.3e-06	47.27	Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1	[more]
Q9LYR6	1.4e-05	38.46	Protein NRT1/ PTR FAMILY 6.1 OS=Arabidopsis thaliana OX=3702 GN=NPF6.1 PE=2 SV=1	[more]
Q9SZY4	7.2e-05	49.09	Protein NRT1/ PTR FAMILY 6.2 OS=Arabidopsis thaliana OX=3702 GN=NPF6.2 PE=1 SV=1	[more]

BLAST of CSPI03G31890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAE5	1.2e-58	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733330 PE=3 SV=1	[more]
A0A5D3DNB8	2.5e-16	87.27	Protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7TPU6	2.5e-16	87.27	Protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A6J1CUS4	2.5e-16	87.27	protein NRT1/ PTR FAMILY 5.6-like OS=Momordica charantia OX=3673 GN=LOC111014971...	[more]
A0A1S3B6K9	2.5e-16	87.27	protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo OX=3656 GN=LOC103486351 PE=3 SV=1	[more]

BLAST of CSPI03G31890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737503.1	3.2e-18	94.55	protein NRT1/ PTR FAMILY 5.6 [Cucumis sativus] >KAE8650995.1 hypothetical protei...	[more]
KAA0044126.1	5.1e-16	87.27	protein NRT1/ PTR FAMILY 5.6 [Cucumis melo var. makuwa]	[more]
XP_022145545.1	5.1e-16	87.27	protein NRT1/ PTR FAMILY 5.6-like [Momordica charantia]	[more]
TYK25012.1	5.1e-16	87.27	protein NRT1/ PTR FAMILY 5.6 [Cucumis melo var. makuwa]	[more]
XP_008442499.1	5.1e-16	87.27	PREDICTED: protein NRT1/ PTR FAMILY 5.6 [Cucumis melo]	[more]

BLAST of CSPI03G31890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37900.1	1.9e-13	63.64	Major facilitator superfamily protein	[more]
AT3G53960.1	9.0e-11	58.18	Major facilitator superfamily protein	[more]
AT1G62200.1	9.3e-08	47.27	Major facilitator superfamily protein	[more]
AT5G13400.1	1.0e-06	38.46	Major facilitator superfamily protein	[more]
AT2G26690.1	5.1e-06	49.09	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 71..140 e-value: 3.9E-11 score: 43.8
IPR000109	Proton-dependent oligopeptide transporter family	PFAM	PF00854	PTR2	coord: 84..133 e-value: 5.3E-5 score: 22.2
IPR000109	Proton-dependent oligopeptide transporter family	PANTHER	PTHR11654	OLIGOPEPTIDE TRANSPORTER-RELATED	coord: 82..138
None	No IPR available	PANTHER	PTHR11654:SF459	PROTEIN NRT1/ PTR FAMILY 5.6	coord: 82..138

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G31890	CSPI03G31890	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G31890.mrna.cds.1	CSPI03G31890.mrna.cds.1	CDS
CSPI03G31890.mrna.cds.2	CSPI03G31890.mrna.cds.2	CDS
CSPI03G31890.mrna.cds.3	CSPI03G31890.mrna.cds.3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G31890.1	CSPI03G31890.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0035442	dipeptide transmembrane transport
biological_process	GO:0042939	tripeptide transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0071916	dipeptide transmembrane transporter activity
molecular_function	GO:0042937	tripeptide transmembrane transporter activity