CSPI03G27150.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G27150.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ULP_PROTEASE domain-containing protein
Location	Chr3: 24674340 .. 24674654 (-)
Sequence length	228
RNA-Seq Expression	CSPI03G27150.1
Synteny	CSPI03G27150.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTAGTATGAATTTTATTCCTATAGTTTTCCATTTTTCTTATGCAATACATTAATATGTTTATATTTTCTTCCACTATATACTATAGGATGGGACTTCTTGTCTACTAGTGATGGGGGCCAAGGAGAATGTCTTCAGGGTTATAACTATATTTAACTATGACATGGAGGGTGACAACATGAAGGTTTCAACGGGCGTGGTTGTGGACGGTGATTGCTTCGTCCCTGTTCCAGCAAGGGAAGGTGTCAATGTGATTTTCCGAGAAGTTGGATCATATTTGTTATGGCCTTGTCATTTGGTCATTCCCTAA

mRNA sequence

ATGAAGGATGGGACTTCTTGTCTACTAGTGATGGGGGCCAAGGAGAATGTCTTCAGGGTTATAACTATATTTAACTATGACATGGAGGGTGACAACATGAAGGTTTCAACGGGCGTGGTTGTGGACGGTGATTGCTTCGTCCCTGTTCCAGCAAGGGAAGGTGTCAATGTGATTTTCCGAGAAGTTGGATCATATTTGTTATGGCCTTGTCATTTGGTCATTCCCTAA

Coding sequence (CDS)

ATGAAGGATGGGACTTCTTGTCTACTAGTGATGGGGGCCAAGGAGAATGTCTTCAGGGTTATAACTATATTTAACTATGACATGGAGGGTGACAACATGAAGGTTTCAACGGGCGTGGTTGTGGACGGTGATTGCTTCGTCCCTGTTCCAGCAAGGGAAGGTGTCAATGTGATTTTCCGAGAAGTTGGATCATATTTGTTATGGCCTTGTCATTTGGTCATTCCCTAA

Protein sequence

MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFREVGSYLLWPCHLVIP*

Homology

[Close]

BLAST of CSPI03G27150.1 vs. ExPASy TrEMBL
Match: A0A5A7TC29 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold555G00040 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 1    MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
            +KDGTSC L +G K+NV  V TIF+YDM+GDN+KVS  +V DG+CFV VP REG  ++ R
Sbjct: 1182 VKDGTSCRLAIGTKDNVVGVGTIFDYDMDGDNVKVSVDMVTDGNCFVHVPTREGRTMLSR 1241

Query: 61   EVGSYLLWPCHLVIP 76
            EVGS LLWPCHLVIP
Sbjct: 1242 EVGSQLLWPCHLVIP 1256

[Close]

BLAST of CSPI03G27150.1 vs. ExPASy TrEMBL
Match: A0A5D3DL96 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001770 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-20
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+YDM+GDN+KVS  +V DG+CFVPVP +EG  ++ +
Sbjct: 403 VKDGTSCRLAIGTKDNVVGAGTIFDYDMDGDNVKVSVDMVTDGNCFVPVPTKEGRTMLSQ 462

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 463 EVGSQLLWPRHLVIP 477

[Close]

BLAST of CSPI03G27150.1 vs. ExPASy TrEMBL
Match: A0A5A7TF26 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G001110 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-20
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+YDM+GDN+KVS  +V DG+CFVPVP +EG  ++ +
Sbjct: 430 VKDGTSCRLAIGTKDNVVGAGTIFDYDMDGDNVKVSVDMVTDGNCFVPVPTKEGRTMLSQ 489

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 490 EVGSQLLWPRHLVIP 504

[Close]

BLAST of CSPI03G27150.1 vs. ExPASy TrEMBL
Match: A0A5A7SM56 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004940 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+Y M+GDN+KVS  +V DG+CFVPVP REG  ++ +
Sbjct: 905 VKDGTSCRLAIGTKDNVVGAGTIFDYYMDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQ 964

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 965 EVGSQLLWPRHLVIP 979

[Close]

BLAST of CSPI03G27150.1 vs. ExPASy TrEMBL
Match: A0A5A7TBV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001250 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+YDM+GDN+KVS  +V DG+CFVPVP RE   ++ +
Sbjct: 349 VKDGTSCRLAIGTKDNVVGAGTIFDYDMDGDNVKVSVDMVTDGNCFVPVPTRECRTMLSQ 408

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 409 EVGSQLLWPRHLVIP 423

[Close]

BLAST of CSPI03G27150.1 vs. NCBI nr
Match: KAA0040643.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21
Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 1    MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
            +KDGTSC L +G K+NV  V TIF+YDM+GDN+KVS  +V DG+CFV VP REG  ++ R
Sbjct: 1182 VKDGTSCRLAIGTKDNVVGVGTIFDYDMDGDNVKVSVDMVTDGNCFVHVPTREGRTMLSR 1241

Query: 61   EVGSYLLWPCHLVIP 76
            EVGS LLWPCHLVIP
Sbjct: 1242 EVGSQLLWPCHLVIP 1256

[Close]

BLAST of CSPI03G27150.1 vs. NCBI nr
Match: TYK24391.1 (uncharacterized protein E5676_scaffold205G001770 [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+YDM+GDN+KVS  +V DG+CFVPVP +EG  ++ +
Sbjct: 403 VKDGTSCRLAIGTKDNVVGAGTIFDYDMDGDNVKVSVDMVTDGNCFVPVPTKEGRTMLSQ 462

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 463 EVGSQLLWPRHLVIP 477

[Close]

BLAST of CSPI03G27150.1 vs. NCBI nr
Match: KAA0041518.1 (uncharacterized protein E6C27_scaffold6G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+YDM+GDN+KVS  +V DG+CFVPVP +EG  ++ +
Sbjct: 430 VKDGTSCRLAIGTKDNVVGAGTIFDYDMDGDNVKVSVDMVTDGNCFVPVPTKEGRTMLSQ 489

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 490 EVGSQLLWPRHLVIP 504

[Close]

BLAST of CSPI03G27150.1 vs. NCBI nr
Match: KAA0040934.1 (uncharacterized protein E6C27_scaffold125G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 5.9e-19
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+YDM+GDN+KVS  +V DG+CFVPVP RE   ++ +
Sbjct: 349 VKDGTSCRLAIGTKDNVVGAGTIFDYDMDGDNVKVSVDMVTDGNCFVPVPTRECRTMLSQ 408

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 409 EVGSQLLWPRHLVIP 423

[Close]

BLAST of CSPI03G27150.1 vs. NCBI nr
Match: KAA0043010.1 (uncharacterized protein E6C27_scaffold75G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 5.9e-19
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MKDGTSCLLVMGAKENVFRVITIFNYDMEGDNMKVSTGVVVDGDCFVPVPAREGVNVIFR 60
           +KDGTSC L +G K+NV    TIF+Y M+GDN+KVS  +V DG+CFVPVP REG  ++ +
Sbjct: 53  VKDGTSCRLAIGTKDNVVGAGTIFDYYMDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQ 112

Query: 61  EVGSYLLWPCHLVIP 76
           EVGS LLWP HLVIP
Sbjct: 113 EVGSQLLWPRHLVIP 127

The following BLAST results are available for this feature:

BLAST of CSPI03G27150.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G27150.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TC29	1.4e-21	66.67	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold555G00040 PE...	[more]
A0A5D3DL96	5.7e-20	62.67	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TF26	5.7e-20	62.67	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7SM56	2.8e-19	62.67	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TBV0	2.8e-19	62.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CSPI03G27150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040643.1	2.8e-21	66.67	transposase [Cucumis melo var. makuwa]	[more]
TYK24391.1	1.2e-19	62.67	uncharacterized protein E5676_scaffold205G001770 [Cucumis melo var. makuwa]	[more]
KAA0041518.1	1.2e-19	62.67	uncharacterized protein E6C27_scaffold6G001110 [Cucumis melo var. makuwa]	[more]
KAA0040934.1	5.9e-19	62.67	uncharacterized protein E6C27_scaffold125G001250 [Cucumis melo var. makuwa]	[more]
KAA0043010.1	5.9e-19	62.67	uncharacterized protein E6C27_scaffold75G00850 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G27150.1 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G27150	CSPI03G27150	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G27150.1.cds2	CSPI03G27150.1.cds2	CDS
CSPI03G27150.1.cds1	CSPI03G27150.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G27150.1	CSPI03G27150.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0008234	cysteine-type peptidase activity