CSPI03G02810.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G02810.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Location	Chr3: 2185030 .. 2189141 (+)
Sequence length	812
RNA-Seq Expression	CSPI03G02810.1
Synteny	CSPI03G02810.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTTTATTTTAATAAAAACCATTGTGTTTGCCCCATTGCTGCGATTGTTCTTAAGAACAAATAACTCAAAAGAGGAACAAGACGAAGATTTGGGAATCTTGAAGAGCGAAAACCACCGAAAATGGCAGGCAAATTGACCAATTTGGGTTCTAAAATCCTTGGTGGAAATGGCGTTGTTGGTCGCTCAATCGGTTCATCTCTTCGACTTCGCTCCGGCATGGGCCTTCCCGTCGGCAAACATATCGTTCCCGACAAACCCGTAAGCAATTCAACCTTCTATCTTTGAAAATTCGTTTCAAAATCAGTACCCCTTTGAAGCAGATTTTGTAGGATTTATGATTGTTTTTCCCTTTTTAGCTTCCTGAGAATGATGAACTGGTTTGGGATAATGGAACTCCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACAGTTGGGAAGGTATGGTTTGAGGATTTTGTACTTTTTATTTCTTCTGCAATTTTTGTATTTATCTTGGGTTTCTTCTTGTTCAGTACGAAGCCTTGGCTTGGTTATGTGGAGGATTGGGATTCTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATTCCATTTGTAAGTTTACTGAACTGAATATGTTTTGTGCATTGTTTGTTCTATGTTGTTTGTTGGGTTATTTGATATCCCCACCTGCATACTTGTGTGACTGTTGTAGGATAAATCTCTTGTTCATTACCGTGGATTTTGTGAAATATGATGGTGCCCAGTTTAGTGCAACATTTAGAGCGAACTGCCTTTTGTCATGGAATCCAATTTGTGTTAGTTATCCTTTGTATTTAACATTGATTTCTTTGATTTAGAGGCGGAAACATGGGGGGATCTAGATAAATGTTTCTTGAGATGGCTAACTTATAATATGATGCAAGACTGAACAGTTTTATTAGATTAATTTTAACCTATTATGGCTCTGGAGACTTTCCATTGACAGTAACTGTCTAGTGTCTAGCATGCCTAGCCTGTAATTATGGAATTCTACTGACCAGAGTAGAAGGTCAAGGAGCTTTTTTGTCACACAATTTCTTGGATTTTAGACCCTGGACTGATGTGAGGCACCCTTACTGATGTGCACAGCTTTTTTCATAAATGGAGTGTTGTTCTCCCTTCTTTGTTTAAGCAATTGGGTTTCAGGAGAGCAGGAGGGATAATTGGGAGTATGTTAGAAGAATTAGACAGCAGCAAAGAAAAGGGAAGTTGGAGAGAATAGAAGTATTATCAATATTTTATTTATAGCCTTAACACTCTCATTCACTTGTCGACTTGAAAATTTGTAAAAGGCCAAATCAGTTGCTATTAATATTACTTGGAGAGAAAATGACATAAACAGACCTTTAGTCTATTGCCATGTTAAATGATCGTTAGATCATTCAAAAGCTTAAGCTGATAGTTTCCTGTATGTTTATTATATTTTGGTCTTATAGTTTCTTCCATACTTGAGGTTGATAGTCAAAGGCCTCCCCAGTCCCCATGTCTCTAAATGGTTAACCAGAGCCATTCCTAATGACTTTTCTAACCAAGCTTGATTTTGACAAACTAATCTCTCTAATGCAACAAGGGGTGGACACCACTCTTATTCTTCCTTTTGTTCTTTTTTCATGGTTATCAACTCAATTTTAGATAGTATTAGAGGCATAATAAGCTTCAAACTTGCTGTTTTGGGTGCCTGGATGGCCGTTTTGTGCGCCATTTTTGGACTTTATGGGAGAGTGTAATAAAATGTCTCTTCAGAGATTCTTTTTCTTACTTCGATAGTTTCATGGATATGGTTTTGTTTAGTGTATACTGGTTATTGGTGTAAAACAAGACACCCAGCATTTTACTCTTTCCTTTTTGTAATCAACATAAGCTCAAACTTGCCAAAGGCGATTCCTTGAACATTGATGTTCCTAGAAACCACCTAAAGGGTTGATAGATGCAAGCAAAAGGTCAAAGGTTACAAAATGAACTCTTGTTTCTCTTCAACCATTCTCCAAAGATTGGCTGTCATGGCATTGGACCACAAAACAAAAGCCAGCCCCTTAAAAAGGAAAGCCTTCCAAAAGCTGGGAAAGGGTGATTGAACCTTTTGGGAACACTAGTCCAAGATGAGAATGAAAGGACTTCAACTGGTGGGTGTCTTGTAACCAGCAACGACTCATGGTGAGCTGCTTTGGTTTTGCTACATTTTCAGAGGGTTGCTACCTGTCTAGTCATCCCCCCGAAGGAGACTAACCGCTCTTTTTTTTTTCCAGCTAAATTTTTCATAGGATATCAAAAAGAAAAAAAAACTGTAAAAATATATGGCTCAATTCTTACTCATGTTTGGTAGAACAAACCACTGAGGCCCCAGCATAGGATGATAAGATCTATAGAAAATTCTATAGCTATTAATCCTCCCAAAAGAGGCAAACCAAAGAACTTCATCTTCTTTGGAGTGTGAAATTCCATATATATGTGTGTGTATATATATAAAATACTAGTATATAACCAAGGTGGAATTGAGACTTTACTCTGATGTATAAAATATTATAAAATTAGTTTTCTACCCAAAAAAACAAAACACAACAGAAAACTACTCTTTGAAATGTATAAAATATTATAAAATGTATAAAATATTCTTTGAAGCAGAAGCAGAAAGGGAACAGAAGAGGTAGATGAAGACGTGCGTTGAAGAAAAGCCGTGTGGGAGAAGAAGAGTCGTTCTTAACTTTCACGTAATAGGTTTAAAAAGCCTATATAATAATTTTTTTCTTGTTAAAACCCAGCCCATTAGTTATAAAAAAGCCCATGCTTAATGCGACTTGAGCCTAGGCGCGCCTCAAGGAAGGCGCGTGCCTAAGCCAGGCTTTAGTGAAAAGGCCTCACTTCTTCACAAATAAGCCCCATCTGCACGACTTGAGCCTAGGCGTGCGCCTTAGTGAGCCTTTTAAAACACTTACAAAAGGAGAAGACGGATATATAGGAAAGTGTTCCAAACTCGAGTGTAACTCAACTAATCAAGGTATATACCCTCACCGTGAGATTAGAGGTTTAAATCCACCCCCAAGTGCTATGTTTGTACATGCATATATGTGTTGTATAATGAATATATAGGCAAGTGTTTCATCAAAAAATAGTTTCCAACGGAGGAAATATCTGGAGGTTCAAGGGAGTCTGTTTTATGTTCTTGTTGTGGTGTTTGTATAGTATGGGGTCATATACTTTAATATAGTTTTGATTCAGTACATTTACTTCTTTGATATTTGAATTAAACCGATCTATTGGTGGTGTTCCCTGTGACAAGAATGTACTTATATTAAACTATACTTCAATATATTTTCCAATCAGTATGTTTACCTCCTAATTGATATTTGCATAAAACGATCTATTTGCTATGTTCCCTGTGACAAGACTGTACCTTATGGAAATGAAACTGAATAAAAAACTTAGTTTATGGTTCAACTCTTCTTGAAGACCAGAAGTTTCCTATCTATAATTTTCTCCAAAACAGCTTGAATTTTTCCCTGGTCCTTTTCTTTGATGCATTATAAGACTTCTCTTTTCTTTCTTTTTTAAAATGAATCCATCATTCTTTACTTTATCGTGTTACCTCAACGGATTCTCACAATATTATTTATCTTTCAATTTTTTGTGCCTTGATTTATATCTTGGATGAATTTACCATTCTCAAGATGATTGACAATAAACTTCATCTTTCTTTTAATCAGGCGCCAAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGATCCAGAAGCTTAGATAGATATTAGACCTCAAGTGGAATGACCATTTTGGTAATGTTTCTTTTCAGACACAAAAAACCCTTGTTGAATCGTTTGCCTTTGGAATTTGCTATGCATCAAAATAATGGATTTTGTTGCCTGTGCTGAAATCTCTCTTTGGCATTGCTGTAAATCACTTCTATATTTTTATTCTTACAATGAGGTTTTGAAGACCTTTTTGCCATCAGTGCTAAAATAATTGATTGAGTGTTCCAATTAGTTATCATTTTAAGATGAGATGGGGAATTCTATGAAATTCAGTGTCACTCTACAAATGAA

mRNA sequence

TTTTAATTTTATTTTAATAAAAACCATTGTGTTTGCCCCATTGCTGCGATTGTTCTTAAGAACAAATAACTCAAAAGAGGAACAAGACGAAGATTTGGGAATCTTGAAGAGCGAAAACCACCGAAAATGGCAGGCAAATTGACCAATTTGGGTTCTAAAATCCTTGGTGGAAATGGCGTTGTTGGTCGCTCAATCGGTTCATCTCTTCGACTTCGCTCCGGCATGGGCCTTCCCGTCGGCAAACATATCGTTCCCGACAAACCCCTTCCTGAGAATGATGAACTGGTTTGGGATAATGGAACTCCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACAGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGAGGATTGGGATTCTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATTCCATTTGCGCCAAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGATCCAGAAGCTTAGATAGATATTAGACCTCAAGTGGAATGACCATTTTGGTAATGTTTCTTTTCAGACACAAAAAACCCTTGTTGAATCGTTTGCCTTTGGAATTTGCTATGCATCAAAATAATGGATTTTGTTGCCTGTGCTGAAATCTCTCTTTGGCATTGCTGTAAATCACTTCTATATTTTTATTCTTACAATGAGGTTTTGAAGACCTTTTTGCCATCAGTGCTAAAATAATTGATTGAGTGTTCCAATTAGTTATCATTTTAAGATGAGATGGGGAATTCTATGAAATTCAGTGTCACTCTACAAATGAA

Coding sequence (CDS)

ATGGCAGGCAAATTGACCAATTTGGGTTCTAAAATCCTTGGTGGAAATGGCGTTGTTGGTCGCTCAATCGGTTCATCTCTTCGACTTCGCTCCGGCATGGGCCTTCCCGTCGGCAAACATATCGTTCCCGACAAACCCCTTCCTGAGAATGATGAACTGGTTTGGGATAATGGAACTCCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACAGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGAGGATTGGGATTCTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATTCCATTTGCGCCAAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGATCCAGAAGCTTAG

Protein sequence

MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVELGGDPEA*

Homology

[Close]

BLAST of CSPI03G02810.1 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.6e-56
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+ + S+I+GGNGVV RS+GSSLR R+GMGLPVGKHIVPDKPL  NDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGDP 126
           LGG+P
Sbjct: 121 LGGEP 125

[Close]

BLAST of CSPI03G02810.1 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.3e-68
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAGKLTNLGSKILGGNGVVGRSI SSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGGDPEA
Sbjct: 121 LGGDPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.3e-68
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAGKLTNLGSKILGGNGVVGRSI SSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGGDPEA
Sbjct: 121 LGGDPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.9e-64
Identity = 119/127 (93.70%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+PEA
Sbjct: 121 LGGEPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. ExPASy TrEMBL
Match: A0A6J1E6K0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431068 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+PEA
Sbjct: 121 LGGEPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 117/127 (92.13%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NLGSK+LGGNGVVGRSI SSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+ EA
Sbjct: 121 LGGEAEA 127

[Close]

BLAST of CSPI03G02810.1 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 8.8e-68
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAGKLTNLGSKILGGNGVVGRSI SSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGGDPEA
Sbjct: 121 LGGDPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NL S+ILGGNGVVGRSI SSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLSSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+PEA
Sbjct: 121 LGGEPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 5.9e-64
Identity = 119/127 (93.70%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+PEA
Sbjct: 121 LGGEPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. NCBI nr
Match: XP_022923346.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata] >KAG6577693.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015735.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.9 bits (642), Expect = 2.9e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+PEA
Sbjct: 121 LGGEPEA 127

[Close]

BLAST of CSPI03G02810.1 vs. NCBI nr
Match: XP_022950674.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata] >XP_023538880.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6596853.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.5 bits (641), Expect = 3.8e-63
Identity = 117/127 (92.13%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+NLGSK+LGGNGVVGRSI SSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGDPEA 128
           LGG+ EA
Sbjct: 121 LGGEAEA 127

[Close]

BLAST of CSPI03G02810.1 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-57
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MAGKLTNLGSKILGGNGVVGRSIGSSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60
           MAG+L+ + S+I+GGNGVV RS+GSSLR R+GMGLPVGKHIVPDKPL  NDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGDP 126
           LGG+P
Sbjct: 121 LGGEP 125

The following BLAST results are available for this feature:

BLAST of CSPI03G02810.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGK0	1.6e-56	80.80	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar...	[more]

BLAST of CSPI03G02810.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5J8	4.3e-68	99.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1	[more]
A0A1S3BK37	4.3e-68	99.21	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu...	[more]
A0A6J1HN93	2.9e-64	93.70	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu...	[more]
A0A6J1E6K0	1.4e-63	92.91	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu...	[more]
A0A6J1KTK9	1.9e-63	92.13	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ...	[more]

BLAST of CSPI03G02810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147198.1	8.8e-68	99.21	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu...	[more]
XP_038903151.1	1.2e-64	94.49	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Beni...	[more]
XP_022965223.1	5.9e-64	93.70	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu...	[more]
XP_022923346.1	2.9e-63	92.91	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu...	[more]
XP_022950674.1	3.8e-63	92.13	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ...	[more]

BLAST of CSPI03G02810.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47570.1	1.2e-57	80.80	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36401:SF2	BNAC02G33360D PROTEIN	coord: 1..125
IPR038863	Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	PANTHER	PTHR36401	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIAL	coord: 1..125

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G02810	CSPI03G02810	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G02810.1.utr5p1	CSPI03G02810.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G02810.1.cds1	CSPI03G02810.1.cds1	CDS
CSPI03G02810.1.cds2	CSPI03G02810.1.cds2	CDS
CSPI03G02810.1.cds3	CSPI03G02810.1.cds3	CDS
CSPI03G02810.1.cds4	CSPI03G02810.1.cds4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G02810.1.utr3p1	CSPI03G02810.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G02810.1	CSPI03G02810.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane