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CSPI03G00560.2 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACCATTAAAAAGCACCATTTCTCTTACACAAATAATCTCTAATTTCTTTCTTTTTTTGTTCTCTAAATGGAAGAAGTTTGGAAAGACATAAGTCTCTCTTCTCTCCACTCCCGCTCCGATCATGACTTCTCCTCCGCCGCTCCCACTCCCATCAGTCTCCACCTCCACCACCACCACTCCGCTGCCAACTTACGCCACATCATCCTCCAAGACTTCCTTTCTACTTCCACTTCCAAACTCGACTCCTCCTCCTCCTCCTCCTCCGCCCTCGCTCTCCCCCCCGTCCCTGCCCCCCCACCTACTCTCTTATCCTTGAATTCCACAAGGGAATTACATTTCCCCGATAACAACTCCATCGCCACCGCCACCGCCGCCGCCCACTTCCGCCACCACGATCCTTCCTCTCTCTCCGCCGCCTTCCACAGCCCCTTTGATCAACTTCTCGGCCCACCACCCTTCGCCAAAAAAAGGCTCACTGATTCAGATAACTCCGGCGATCGCCGGCAGAAACGCATGATCAAGAATCGCGAATCCGCCGCCCGATCTCGTGCACGAAAACAGGTTTAATCCATTCCTTATCTTTTCTTAATTAAATAAATAGATAAATAAATTCCCTAAACATCAATTTTTTTTTAAAAAAAAAAAATTTTATCCACAGGCTTACGCAAACGAGCTGGAGCTTGAAGTGTCTAATTTAAAGGAAGAAAATGCAAAACTTAGGAGACAACAGGAAGAGGTAACTAAATCTTTTTCTTTCCACCAAATTTTGGTTTCTTTGAGGAAATTACAAAGATCAATTAGAGAAAAATTAGAAATAAGAAAGAAAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACCCAACAATAGACAAAAGAAGGTTAAAGAAAAACGGTTGTGTGTGCAGCTACAAGCAGTGGCGATGGCTCAGGTTCCAAGAAAACACAGGCTGCAGCGGACATCAACGGCGCCGTTTTAGCGATAAGAGGAGGGGTTTGTTTGAGGGTTAATTTTGTTGGGGGATGAAAAGGAAGGAATTTTCTGAAATGTTTGCATAAAGAAAAGGGAAACACTTTGGTGATTTAGGTTAAAAGAAAAAAAGAATTAACAGAGAACTAATTCTAAACTTGATGATGCTGATGATGATGATGATGATCAGTGTTTGTGTAGGGCAGATTCT CCACCATTAAAAAGCACCATTTCTCTTACACAAATAATCTCTAATTTCTTTCTTTTTTTGTTCTCTAAATGGAAGAAGTTTGGAAAGACATAAGTCTCTCTTCTCTCCACTCCCGCTCCGATCATGACTTCTCCTCCGCCGCTCCCACTCCCATCAGTCTCCACCTCCACCACCACCACTCCGCTGCCAACTTACGCCACATCATCCTCCAAGACTTCCTTTCTACTTCCACTTCCAAACTCGACTCCTCCTCCTCCTCCTCCTCCGCCCTCGCTCTCCCCCCCGTCCCTGCCCCCCCACCTACTCTCTTATCCTTGAATTCCACAAGGGAATTACATTTCCCCGATAACAACTCCATCGCCACCGCCACCGCCGCCGCCCACTTCCGCCACCACGATCCTTCCTCTCTCTCCGCCGCCTTCCACAGCCCCTTTGATCAACTTCTCGGCCCACCACCCTTCGCCAAAAAAAGGCTCACTGATTCAGATAACTCCGGCGATCGCCGGCAGAAACGCATGATCAAGAATCGCGAATCCGCCGCCCGATCTCGTGCACGAAAACAGGCTTACGCAAACGAGCTGGAGCTTGAAGTGTCTAATTTAAAGGAAGAAAATGCAAAACTTAGGAGACAACAGGAAGAGGTAACTAAATCTTTTTCTTTCCACCAAATTTTGGTTTCTTTGAGGAAATTACAAAGATCAATTAGAGAAAAATTAGAAATAAGAAAGAAAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACCCAACAATAGACAAAAGAAGGTTAAAGAAAAACGGTTGTGTGTGCAGCTACAAGCAGTGGCGATGGCTCAGGTTCCAAGAAAACACAGGCTGCAGCGGACATCAACGGCGCCGTTTTAGCGATAAGAGGAGGGGTTTGTTTGAGGGTTAATTTTGTTGGGGGATGAAAAGGAAGGAATTTTCTGAAATGTTTGCATAAAGAAAAGGGAAACACTTTGGTGATTTAGGTTAAAAGAAAAAAAGAATTAACAGAGAACTAATTCTAAACTTGATGATGCTGATGATGATGATGATGATCAGTGTTTGTGTAGGGCAGATTCT ATGGAAGAAGTTTGGAAAGACATAAGTCTCTCTTCTCTCCACTCCCGCTCCGATCATGACTTCTCCTCCGCCGCTCCCACTCCCATCAGTCTCCACCTCCACCACCACCACTCCGCTGCCAACTTACGCCACATCATCCTCCAAGACTTCCTTTCTACTTCCACTTCCAAACTCGACTCCTCCTCCTCCTCCTCCTCCGCCCTCGCTCTCCCCCCCGTCCCTGCCCCCCCACCTACTCTCTTATCCTTGAATTCCACAAGGGAATTACATTTCCCCGATAACAACTCCATCGCCACCGCCACCGCCGCCGCCCACTTCCGCCACCACGATCCTTCCTCTCTCTCCGCCGCCTTCCACAGCCCCTTTGATCAACTTCTCGGCCCACCACCCTTCGCCAAAAAAAGGCTCACTGATTCAGATAACTCCGGCGATCGCCGGCAGAAACGCATGATCAAGAATCGCGAATCCGCCGCCCGATCTCGTGCACGAAAACAGGCTTACGCAAACGAGCTGGAGCTTGAAGTGTCTAATTTAAAGGAAGAAAATGCAAAACTTAGGAGACAACAGGAAGAGGTAACTAAATCTTTTTCTTTCCACCAAATTTTGGTTTCTTTGAGGAAATTACAAAGATCAATTAGAGAAAAATTAGAAATAAGAAAGAAAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACCCAACAATAG MEEVWKDISLSSLHSRSDHDFSSAAPTPISLHLHHHHSAANLRHIILQDFLSTSTSKLDSSSSSSSALALPPVPAPPPTLLSLNSTRELHFPDNNSIATATAAAHFRHHDPSSLSAAFHSPFDQLLGPPPFAKKRLTDSDNSGDRRQKRMIKNRESAARSRARKQAYANELELEVSNLKEENAKLRRQQEEVTKSFSFHQILVSLRKLQRSIREKLEIRKKKEKERERERERERETQQ* Homology
BLAST of CSPI03G00560.2 vs. ExPASy Swiss-Prot
Match: Q84JK2 (Protein FD OS=Arabidopsis thaliana OX=3702 GN=FD PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25 Identity = 94/220 (42.73%), Postives = 128/220 (58.18%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy Swiss-Prot
Match: Q7PCC6 (bZIP transcription factor 27 OS=Arabidopsis thaliana OX=3702 GN=FDP PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16 Identity = 83/201 (41.29%), Postives = 105/201 (52.24%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy Swiss-Prot
Match: Q9LES3 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DPBF3 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.6e-10 Identity = 36/47 (76.60%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy Swiss-Prot
Match: Q9C5Q2 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=DPBF4 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.3e-10 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy Swiss-Prot
Match: Q6ZDF3 (bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRAB1 PE=1 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09 Identity = 35/49 (71.43%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy TrEMBL
Match: A0A0A0L664 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002610 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 8.5e-94 Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy TrEMBL
Match: A0A5A7UAI3 (Protein FD OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00510 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.3e-81 Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy TrEMBL
Match: A0A1S3BJW5 (protein FD OS=Cucumis melo OX=3656 GN=LOC103490672 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.3e-81 Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy TrEMBL
Match: A0A6J1HN91 (protein FD OS=Cucurbita maxima OX=3661 GN=LOC111465189 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 9.1e-72 Identity = 155/194 (79.90%), Postives = 172/194 (88.66%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. ExPASy TrEMBL
Match: A0A6J1E646 (protein FD OS=Cucurbita moschata OX=3662 GN=LOC111431061 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 1.3e-70 Identity = 154/194 (79.38%), Postives = 171/194 (88.14%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. NCBI nr
Match: XP_011652706.2 (protein FD [Cucumis sativus] >KGN55667.2 hypothetical protein Csa_011045 [Cucumis sativus]) HSP 1 Score: 357.8 bits (917), Expect = 7.1e-95 Identity = 190/192 (98.96%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. NCBI nr
Match: XP_008448521.1 (PREDICTED: protein FD [Cucumis melo] >KAA0052943.1 protein FD [Cucumis melo var. makuwa]) HSP 1 Score: 310.5 bits (794), Expect = 1.3e-80 Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. NCBI nr
Match: XP_022965275.1 (protein FD [Cucurbita maxima]) HSP 1 Score: 280.0 bits (715), Expect = 1.9e-71 Identity = 155/194 (79.90%), Postives = 172/194 (88.66%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. NCBI nr
Match: XP_022923339.1 (protein FD [Cucurbita moschata]) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-70 Identity = 154/194 (79.38%), Postives = 171/194 (88.14%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. NCBI nr
Match: XP_023553184.1 (protein FD [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.0 bits (702), Expect = 6.0e-70 Identity = 154/194 (79.38%), Postives = 169/194 (87.11%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. TAIR 10
Match: AT4G35900.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26 Identity = 94/220 (42.73%), Postives = 128/220 (58.18%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. TAIR 10
Match: AT2G17770.2 (basic region/leucine zipper motif 27 ) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-17 Identity = 83/201 (41.29%), Postives = 105/201 (52.24%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. TAIR 10
Match: AT3G56850.1 (ABA-responsive element binding protein 3 ) HSP 1 Score: 66.2 bits (160), Expect = 4.0e-11 Identity = 36/47 (76.60%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. TAIR 10
Match: AT2G41070.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 65.9 bits (159), Expect = 5.2e-11 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
BLAST of CSPI03G00560.2 vs. TAIR 10
Match: AT2G41070.3 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 65.9 bits (159), Expect = 5.2e-11 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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