CSPI02G12770.1 (mRNA) Cucumber (PI 183967) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGGTGGATATGAACACATGAATTTTGTTGATGGGGTTTATAATAATCAAACACCTTGTCCCCAAAGCAAAAACTTCAGGCCGCCAGAGCCGCCGCCGCCGGCCTTCCTCAATGCGGCCGCGGTGATGCCCTACGCCGAAGGCGCGATCTATCAGGTCTACACCACGCCCGAACGGGTGACCGACATGAAAGAAATATGGGTAAAGTACAATTGCCAATGGAAATTGAACTAAATGTATGGTGGATATGAACACATGAATTTTGTTGATGGGGTTTATAATAATCAAACACCTTGTCCCCAAAGCAAAAACTTCAGGCCGCCAGAGCCGCCGCCGCCGGCCTTCCTCAATGCGGCCGCGGTGATGCCCTACGCCGAAGGCGCGATCTATCAGGTCTACACCACGCCCGAACGGGTGACCGACATGAAAGAAATATGGGTAAAGTACAATTGCCAATGGAAATTGAACTAA ATGTATGGTGGATATGAACACATGAATTTTGTTGATGGGGTTTATAATAATCAAACACCTTGTCCCCAAAGCAAAAACTTCAGGCCGCCAGAGCCGCCGCCGCCGGCCTTCCTCAATGCGGCCGCGGTGATGCCCTACGCCGAAGGCGCGATCTATCAGGTCTACACCACGCCCGAACGGGTGACCGACATGAAAGAAATATGGGTAAAGTACAATTGCCAATGGAAATTGAACTAA MYGGYEHMNFVDGVYNNQTPCPQSKNFRPPEPPPPAFLNAAAVMPYAEGAIYQVYTTPERVTDMKEIWVKYNCQWKLN* Homology
BLAST of CSPI02G12770.1 vs. ExPASy TrEMBL
Match: A0A2K8MBG9 (P-type conjugative transfer protein TrbG OS=Sphingomonas sp. Cra20 OX=1327635 GN=trbG PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08 Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. ExPASy TrEMBL
Match: A0A7G5Z824 (P-type conjugative transfer protein TrbG OS=Sphingomonas alpina OX=653931 GN=trbG PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.2e-08 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. ExPASy TrEMBL
Match: A0A2M8WFR1 (P-type conjugative transfer protein TrbG OS=Sphingomonas koreensis OX=93064 GN=trbG PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. ExPASy TrEMBL
Match: A0A1L6JH65 (P-type conjugative transfer protein TrbG OS=Sphingomonas koreensis OX=93064 GN=BRX40_21055 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. ExPASy TrEMBL
Match: A0A430FXK1 (P-type conjugative transfer protein TrbG OS=Sphingomonas koreensis OX=93064 GN=trbG PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. NCBI nr
Match: KAE8651883.1 (hypothetical protein Csa_006404, partial [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 2.5e-12 Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. NCBI nr
Match: WP_100280998.1 (P-type conjugative transfer protein TrbG [Sphingomonas sp. Cra20] >ATY31187.1 P-type conjugative transfer protein TrbG [Sphingomonas sp. Cra20]) HSP 1 Score: 68.9 bits (167), Expect = 2.2e-08 Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. NCBI nr
Match: WP_183113672.1 (P-type conjugative transfer protein TrbG [Sphingomonas alpina] >QNA86852.1 P-type conjugative transfer protein TrbG [Sphingomonas alpina]) HSP 1 Score: 66.6 bits (161), Expect = 1.1e-07 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. NCBI nr
Match: WP_083954149.1 (P-type conjugative transfer protein TrbG [Sphingomonas koreensis] >PJI89760.1 type IV secretion system protein VirB9 [Sphingomonas koreensis] >RSU61878.1 P-type conjugative transfer protein TrbG [Sphingomonas koreensis] >RSU70533.1 P-type conjugative transfer protein TrbG [Sphingomonas koreensis]) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-07 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of CSPI02G12770.1 vs. NCBI nr
Match: WP_082737834.1 (MULTISPECIES: P-type conjugative transfer protein TrbG [Sphingomonas] >MBA4760865.1 P-type conjugative transfer protein TrbG [Sphingomonas sp.] >RSU20451.1 P-type conjugative transfer protein TrbG [Sphingomonas koreensis] >RSU28853.1 P-type conjugative transfer protein TrbG [Sphingomonas koreensis] >RSU29633.1 P-type conjugative transfer protein TrbG [Sphingomonas koreensis] >RSU36457.1 P-type conjugative transfer protein TrbG [Sphingomonas koreensis]) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-07 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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