![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CSPI01G26650.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGTTTTTCATTGTTACTCACAAATTTTGATGGCCAATTCTCTCTTTAGATTGTTCACTTTATTCTTCTTTGTTCTCATTTCCATCTTCCTCCTTCATCCCAATGTTGTTCTCTGTGATGGTACTGATCTCTCTCTCTCTCTCATGAAATTTCAAAAGGAAAAAAAAATCTTGATTTTCTTTTTTCATTCTTCACTCAAACATGAGTTTATGTTTGTTTTAATTTCCATAATTTTCATCATTCTTTTCTTTTAAAATGCTTGTCCATCCATCTCGATTTTCTTTTGTTTAAGAGTATGGATGATCGACTTTCTTTTGTTTAAGAGTATGGATTGGAAGTGGTTATAAAATTGTTGAAATCACTCTAAAACATGATTTTAATAAATCTAAACCAATTCTTATTATATGAAACCACGTTTCCTAAAATTAAATTTAGAATGAATGTATAATTTTGTTTAGTTCATGTTATAAGTATATTTTCAGTTTTGAAGTATGAACAAAAAGTTAAAACTAAAATTCCAAAACCAAAAAACAAGTTTTGAATAACATTTTTTGTTACTAATTTTCAAAAAAAATTTGTAGAGTTTTCGAAACCATTTGTTAAACAAATTAAGAACTTTCGAGAGACAAAACTGAAAAACAAAAAACAAAATAGGGTCATTAAATTTACCTCAACATAAACCAACGAGAACCTAACCATATCGGCCCCGACATGGCCACTTTTTGATTTTTTGCAGTGAAAGATGATAACATTCTAAATGCCATTAACGAATATAGGGAATCAAAGAATCTATCAAGGCTTTCTTATAACAGAAATGCAGCATGTTTGGCTGGTAAACTTGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCTGAAAATTTCAACAAAGAAATTAGCTCAGAAACTAAGCTTGCAGATTTCCCTAAGCTCTTACGAAAGTGTCACATAGCCTACAACTCCTCTGTTGACGGCATCATTCTCCCCTCTTGCGTCCGTGGACTCGATGCTATATCTGTCACCAGTAACTACACCCGTTCCCACGACGGCGAGTATATCAACGATCAGAACTATACTGGTGCTGGAGTTGGGACGATTGACGATGCTTGGGTTGTTCTCATTCTTAGCACCAACACGTCAACTGGGAACTATGACAACAGTGGATCATCGTCTTTGGTTGTTGCTGGAGGTGGTCGTATTGGTGTGATGGTTGCATTGTTAGGGATGTTTGTTTCATCTTTGTTATTTTGATTTTCTTTTCTTGGGTTGAGTCTTGATCTCAAGCTTGTAAAAGGTCTTTGGTTTTGGGTTTTATGCATTGTATTTGTCATGAACTGTTGATATATTTGTTATCTTTTTACTGATTCTCCTGAGTTAATCAGTACAGTTTATATATATAATCAAAATTTG AATTTGTTTTTCATTGTTACTCACAAATTTTGATGGCCAATTCTCTCTTTAGATTGTTCACTTTATTCTTCTTTGTTCTCATTTCCATCTTCCTCCTTCATCCCAATGTTGTTCTCTGTGATGTGAAAGATGATAACATTCTAAATGCCATTAACGAATATAGGGAATCAAAGAATCTATCAAGGCTTTCTTATAACAGAAATGCAGCATGTTTGGCTGGTAAACTTGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCTGAAAATTTCAACAAAGAAATTAGCTCAGAAACTAAGCTTGCAGATTTCCCTAAGCTCTTACGAAAGTGTCACATAGCCTACAACTCCTCTGTTGACGGCATCATTCTCCCCTCTTGCGTCCGTGGACTCGATGCTATATCTGTCACCAGTAACTACACCCGTTCCCACGACGGCGAGTATATCAACGATCAGAACTATACTGGTGCTGGAGTTGGGACGATTGACGATGCTTGGGTTGTTCTCATTCTTAGCACCAACACGTCAACTGGGAACTATGACAACAGTGGATCATCGTCTTTGGTTGTTGCTGGAGGTGGTCGTATTGGTGTGATGGTTGCATTGTTAGGGATGTTTGTTTCATCTTTGTTATTTTGATTTTCTTTTCTTGGGTTGAGTCTTGATCTCAAGCTTGTAAAAGGTCTTTGGTTTTGGGTTTTATGCATTGTATTTGTCATGAACTGTTGATATATTTGTTATCTTTTTACTGATTCTCCTGAGTTAATCAGTACAGTTTATATATATAATCAAAATTTG ATGGCCAATTCTCTCTTTAGATTGTTCACTTTATTCTTCTTTGTTCTCATTTCCATCTTCCTCCTTCATCCCAATGTTGTTCTCTGTGATGTGAAAGATGATAACATTCTAAATGCCATTAACGAATATAGGGAATCAAAGAATCTATCAAGGCTTTCTTATAACAGAAATGCAGCATGTTTGGCTGGTAAACTTGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCTGAAAATTTCAACAAAGAAATTAGCTCAGAAACTAAGCTTGCAGATTTCCCTAAGCTCTTACGAAAGTGTCACATAGCCTACAACTCCTCTGTTGACGGCATCATTCTCCCCTCTTGCGTCCGTGGACTCGATGCTATATCTGTCACCAGTAACTACACCCGTTCCCACGACGGCGAGTATATCAACGATCAGAACTATACTGGTGCTGGAGTTGGGACGATTGACGATGCTTGGGTTGTTCTCATTCTTAGCACCAACACGTCAACTGGGAACTATGACAACAGTGGATCATCGTCTTTGGTTGTTGCTGGAGGTGGTCGTATTGGTGTGATGGTTGCATTGTTAGGGATGTTTGTTTCATCTTTGTTATTTTGA MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGRIGVMVALLGMFVSSLLF* Homology
BLAST of CSPI01G26650.1 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.8e-24 Identity = 64/186 (34.41%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-23 Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2) HSP 1 Score: 102.8 bits (255), Expect = 4.6e-21 Identity = 61/168 (36.31%), Postives = 96/168 (57.14%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14 Identity = 64/180 (35.56%), Postives = 91/180 (50.56%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy TrEMBL
Match: A0A5D3CFH2 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003820 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97 Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy TrEMBL
Match: A0A1S3BQD0 (uncharacterized GPI-anchored protein At5g19250-like OS=Cucumis melo OX=3656 GN=LOC103492177 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97 Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy TrEMBL
Match: A0A5A7U4V6 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00080 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.1e-97 Identity = 184/201 (91.54%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy TrEMBL
Match: A0A6J1HEB1 (uncharacterized GPI-anchored protein At5g19250-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462076 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 5.7e-67 Identity = 133/190 (70.00%), Postives = 159/190 (83.68%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. ExPASy TrEMBL
Match: A0A6J1HY77 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111467926 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 7.7e-64 Identity = 131/190 (68.95%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. NCBI nr
Match: XP_004135621.1 (uncharacterized GPI-anchored protein At5g19250 [Cucumis sativus] >KAE8653371.1 hypothetical protein Csa_007256 [Cucumis sativus]) HSP 1 Score: 389.0 bits (998), Expect = 2.4e-104 Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. NCBI nr
Match: XP_008450653.1 (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo] >TYK10235.1 putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97 Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. NCBI nr
Match: KAA0050883.1 (putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 364.4 bits (934), Expect = 6.4e-97 Identity = 184/201 (91.54%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. NCBI nr
Match: XP_038879946.1 (uncharacterized GPI-anchored protein At3g06035-like [Benincasa hispida]) HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80 Identity = 161/198 (81.31%), Postives = 175/198 (88.38%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. NCBI nr
Match: KAG7023953.1 (putative GPI-anchored protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66 Identity = 133/190 (70.00%), Postives = 159/190 (83.68%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 111.7 bits (278), Expect = 7.0e-25 Identity = 64/186 (34.41%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24 Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 102.8 bits (255), Expect = 3.2e-22 Identity = 61/168 (36.31%), Postives = 96/168 (57.14%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 98.6 bits (244), Expect = 6.1e-21 Identity = 58/191 (30.37%), Postives = 106/191 (55.50%), Query Frame = 0
BLAST of CSPI01G26650.1 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15 Identity = 64/180 (35.56%), Postives = 91/180 (50.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|