CSPI01G17810.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI01G17810.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	UBP1-associated proteins 1C-like isoform X3
Location	Chr1: 13377283 .. 13378752 (-)
Sequence length	909
RNA-Seq Expression	CSPI01G17810.1
Synteny	CSPI01G17810.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCACGTTCCGAGCAATAGATAACAAATCGCCGGCCACCGCCGCTTCCACCTCCCATCAACCGCTTCAAGGTAACTTAAGCTTAATCGAAATGTTAATCTTTGTTTTACCTTCAGATCCTATTACACAAACATTCCCTCCAGCCTCCATTTCGATTATTCAACCAGTTGCTTATAAGCTTTTTATTGTAATCACTTCAGATGATTCTCTAAAGGAGGAGCTCTGGAAACAACGGATCAAAGAAGAGATAACGATCCGAGAAATAGTGAGACAAAGAATGATGGAGGCAGAGATAAGGAGAGAGATCCTTTTGGAACGAGAACTGGCTATTAGAAGAGTTAGGGGCCAGACGGAAGGCTTATTATCGTTTGACAATCAGTTTCTCGTGAGATTTATGAACGGAAGAGTGAATAGCATTCCGGATCCGTCATCGTTTAGAGCTTTACTGGCGGTTCCAGGTTCCAATCCCTCGCTTAACTTAAAGAAGAACCGAAGCGAGGATGTAATGAACAGGCTAATCACTCTGGTAAGTTAAAGAACCAATACTTTTCACATAATTATTTGTTTAAGACTAAATTAGATAGTTATATTAACAAAATAAAAACTGACCATATTATATTTAAAAATAAACACTTTAGAAAATATTGTAGTAAAATAAATATTTTCCTAGGCTCAAACTAAACTTATTCCACACTATTAACGATGTGATTGAACAAATGCTGTTTATGTCTATACTTGTGAAATAGCTGTGTTTATACGATTTATGCCATAAACTTTTAATTCTCTATATAGGAAGCTACTGAACTAGCAATATCAAATAAGTATATATAAACTTGTGTAGTAAGTAAATTCTTTAACTTATTAGATATTTTTTAATTTTATGTCTTACAGATTCAGGTAAAATTTATATTTAACACCATCTTCGATAGCACTTAAGGTAGATGTCACTCAATGTACTAATTATTTTTCAAAATTTAACTCTGTTTAGAATCTATTAAACACAATATCCAAAACTTAGAAAATCCATTAAGCGACACTTGGCAAAATTTGGGGACGGTGTATTTGAAAGTTCACATGTGGAACATAGAAACTGGAGGAGAGGCCAGACTCGGGAAAATTTATCGGGAAGAGAAAAGCAGAGGGATATCAAGAAGCAACAGCAACAATAGGAGGGCGGGGTGAAAGAGATCAAAGTCAAACCATCATTCCAACTCCTTGGATTGGTTCAAAGAAATTAGCAAAAGACGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCCCACATAAATGGGAAAAAACACCAAGCCAAAGAGGGTCGTACCCAAGTACAACAAACAACTCGTGAGGAACCCAACCAAAGGGAAGAAGATCATAAAGAAAAATTAGACCACCCAATGAACAACATAGATAAAAATCTAGTCGTTCAGAAAAAAAAAAGCTAA

mRNA sequence

ATGAATTTCACGTTCCGAGCAATAGATAACAAATCGCCGGCCACCGCCGCTTCCACCTCCCATCAACCGCTTCAAGGTAACTTAAGCTTAATCGAAATGTTAATCTTTGTTTTACCTTCAGATCCTATTACACAAACATTCCCTCCAGCCTCCATTTCGATTATTCAACCAGTTGCTTATAAGCTTTTTATTGTAATCACTTCAGATGATTCTCTAAAGGAGGAGCTCTGGAAACAACGGATCAAAGAAGAGATAACGATCCGAGAAATAGTGAGACAAAGAATGATGGAGGCAGAGATAAGGAGAGAGATCCTTTTGGAACGAGAACTGGCTATTAGAAGAGTTAGGGGCCAGACGGAAGGCTTATTATCGTTTGACAATCAGTTTCTCGTGAGATTTATGAACGGAAGAGTGAATAGCATTCCGGATCCGTCATCGTTTAGAGCTTTACTGGCGGTTCCAGGTTCCAATCCCTCGCTTAACTTAAAGAAGAACCGAAGCGAGGATGTAATGAACAGGCTAATCACTCTGAAACTGGAGGAGAGGCCAGACTCGGGAAAATTTATCGGGAAGAGAAAAGCAGAGGGATATCAAGAAGCAACAGCAACAATAGGAGGGCGGGGTGAAAGAGATCAAAGTCAAACCATCATTCCAACTCCTTGGATTGGTTCAAAGAAATTAGCAAAAGACGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCCCACATAAATGGGAAAAAACACCAAGCCAAAGAGGGTCGTACCCAAGTACAACAAACAACTCGTGAGGAACCCAACCAAAGGGAAGAAGATCATAAAGAAAAATTAGACCACCCAATGAACAACATAGATAAAAATCTAGTCGTTCAGAAAAAAAAAAGCTAA

Coding sequence (CDS)

ATGAATTTCACGTTCCGAGCAATAGATAACAAATCGCCGGCCACCGCCGCTTCCACCTCCCATCAACCGCTTCAAGGTAACTTAAGCTTAATCGAAATGTTAATCTTTGTTTTACCTTCAGATCCTATTACACAAACATTCCCTCCAGCCTCCATTTCGATTATTCAACCAGTTGCTTATAAGCTTTTTATTGTAATCACTTCAGATGATTCTCTAAAGGAGGAGCTCTGGAAACAACGGATCAAAGAAGAGATAACGATCCGAGAAATAGTGAGACAAAGAATGATGGAGGCAGAGATAAGGAGAGAGATCCTTTTGGAACGAGAACTGGCTATTAGAAGAGTTAGGGGCCAGACGGAAGGCTTATTATCGTTTGACAATCAGTTTCTCGTGAGATTTATGAACGGAAGAGTGAATAGCATTCCGGATCCGTCATCGTTTAGAGCTTTACTGGCGGTTCCAGGTTCCAATCCCTCGCTTAACTTAAAGAAGAACCGAAGCGAGGATGTAATGAACAGGCTAATCACTCTGAAACTGGAGGAGAGGCCAGACTCGGGAAAATTTATCGGGAAGAGAAAAGCAGAGGGATATCAAGAAGCAACAGCAACAATAGGAGGGCGGGGTGAAAGAGATCAAAGTCAAACCATCATTCCAACTCCTTGGATTGGTTCAAAGAAATTAGCAAAAGACGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCCCACATAAATGGGAAAAAACACCAAGCCAAAGAGGGTCGTACCCAAGTACAACAAACAACTCGTGAGGAACCCAACCAAAGGGAAGAAGATCATAAAGAAAAATTAGACCACCCAATGAACAACATAGATAAAAATCTAGTCGTTCAGAAAAAAAAAAGCTAA

Protein sequence

MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAYKLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTEGLLSFDNQFLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLNLKKNRSEDVMNRLITLKLEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIGSKKLAKDEFVCSMCNVKATSEISFNAHINGKKHQAKEGRTQVQQTTREEPNQREEDHKEKLDHPMNNIDKNLVVQKKKS*

Homology

[Close]

BLAST of CSPI01G17810.1 vs. ExPASy TrEMBL
Match: A0A5D3B800 (UBP1-associated proteins 1C-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00520 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.1e-97
Identity = 209/303 (68.98%), Postives = 225/303 (74.26%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
           MNF FRAIDNKSPATAASTS QP+Q                                   
Sbjct: 1   MNFRFRAIDNKSPATAASTSDQPIQ----------------------------------- 60

Query: 61  KLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTE 120
                   DDSL EELWKQRIKEEIT+REIVR+RM+EAEIRRE+L+ERELAIRR RGQTE
Sbjct: 61  --------DDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRELLVERELAIRRARGQTE 120

Query: 121 GLLSFDNQFLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLNLKK--NRSEDVMNRLITLK 180
           GLLSFDNQFLVRFMN  VN I DPSS  ALLAVPGSN SLNLK+     ED MN+LITL 
Sbjct: 121 GLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLNLKEEPKPEEDEMNKLITL- 180

Query: 181 LEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIGSKKLAKDEFVCSMCN 240
             ERPD GKF+GKRKA G QEA A +GG GERDQ QTIIPTPWIGSKKLAK+EFVCSMCN
Sbjct: 181 --ERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQTIIPTPWIGSKKLAKEEFVCSMCN 240

Query: 241 VKATSEISFNAHINGKKHQAKEGRTQVQQTTREEPNQREEDHKEKLDHPMNNIDKNLVVQ 300
           VKATSEISFNAHINGKKH+AKEGR QVQQTT +EPNQ EED KEKLDHP+ NIDKN  ++
Sbjct: 241 VKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQGEEDLKEKLDHPVKNIDKNPALE 257

Query: 301 KKK 302
           K K
Sbjct: 301 KNK 257

[Close]

BLAST of CSPI01G17810.1 vs. ExPASy TrEMBL
Match: A0A1S3B9S7 (uncharacterized protein LOC103487343 OS=Cucumis melo OX=3656 GN=LOC103487343 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.1e-97
Identity = 209/303 (68.98%), Postives = 225/303 (74.26%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
           MNF FRAIDNKSPATAASTS QP+Q                                   
Sbjct: 1   MNFRFRAIDNKSPATAASTSDQPIQ----------------------------------- 60

Query: 61  KLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTE 120
                   DDSL EELWKQRIKEEIT+REIVR+RM+EAEIRRE+L+ERELAIRR RGQTE
Sbjct: 61  --------DDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRELLVERELAIRRARGQTE 120

Query: 121 GLLSFDNQFLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLNLKK--NRSEDVMNRLITLK 180
           GLLSFDNQFLVRFMN  VN I DPSS  ALLAVPGSN SLNLK+     ED MN+LITL 
Sbjct: 121 GLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLNLKEEPKPEEDEMNKLITL- 180

Query: 181 LEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIGSKKLAKDEFVCSMCN 240
             ERPD GKF+GKRKA G QEA A +GG GERDQ QTIIPTPWIGSKKLAK+EFVCSMCN
Sbjct: 181 --ERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQTIIPTPWIGSKKLAKEEFVCSMCN 240

Query: 241 VKATSEISFNAHINGKKHQAKEGRTQVQQTTREEPNQREEDHKEKLDHPMNNIDKNLVVQ 300
           VKATSEISFNAHINGKKH+AKEGR QVQQTT +EPNQ EED KEKLDHP+ NIDKN  ++
Sbjct: 241 VKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQGEEDLKEKLDHPVKNIDKNPALE 257

Query: 301 KKK 302
           K K
Sbjct: 301 KNK 257

[Close]

BLAST of CSPI01G17810.1 vs. ExPASy TrEMBL
Match: A0A6J1EJN4 (uncharacterized protein LOC111433915 OS=Cucurbita moschata OX=3662 GN=LOC111433915 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-16
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 69  DDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTEGLLSFDNQ 128
           DDS   EL KQRIKEEIT RE   +RM+EAEIRRE+++E+EL+I R  G+TEG L+FD  
Sbjct: 83  DDSPNAELVKQRIKEEITNRETASRRMLEAEIRRELIIEQELSILRATGRTEG-LAFDEH 142

Query: 129 FLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLN 162
           F +R ++ R+N I D SS R LLAVPGS  SLN
Sbjct: 143 FAMRMLDLRLNHIVDQSSSRGLLAVPGSCSSLN 174

[Close]

BLAST of CSPI01G17810.1 vs. ExPASy TrEMBL
Match: A0A067L3P2 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04047 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-15
Identity = 94/287 (32.75%), Postives = 133/287 (46.34%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
           M F FRA+D +   T  S+S     G  S               Q F  A  +I+ P   
Sbjct: 1   MEFKFRAVDGRPRFTYESSS--TTAGYFS--------------EQEFRAAYTNILNP--- 60

Query: 61  KLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTE 120
                +  ++ L+ E+ K+RI+EEI   EIVR+RM+EAE+RRE+++ERE+A   +R   E
Sbjct: 61  ----ELMRNEMLQREIKKERIREEIITGEIVRRRMLEAEVRRELMMEREMA---MRAGIE 120

Query: 121 GLLSFDNQFLV------------RFMNGRVN---SIPDPSSFRALLAVPGSNPSLNLK-- 180
           G LSF+ +  +            +F N R+      P    F   L  P  + +L     
Sbjct: 121 GGLSFEERLTMGIRPRVSCSLNDQFYNRRLEMRPPFPARGVFDQWLQPPRLSEALVAPDV 180

Query: 181 KNRSEDVMNRLITLKLEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIG 240
           K  SE   +RLI L    +PD      KRKA     AT   G  GE   +         G
Sbjct: 181 KPASEYNQSRLIVL---AKPDPNLCRAKRKA-----ATIPAGDAGELCLA---------G 240

Query: 241 SKKLAKDEFVCSMCNVKATSEISFNAHINGKKHQAKEGRTQVQQTTR 271
            KK  K+E+ C++C V ATSE   N H+ GKKH+AKE R +  +  +
Sbjct: 241 LKKKPKEEWSCALCQVSATSENGLNEHLRGKKHKAKEARLRATKMAK 244

[Close]

BLAST of CSPI01G17810.1 vs. ExPASy TrEMBL
Match: A0A6J1HN47 (uncharacterized protein LOC111465139 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465139 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-13
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 69  DDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTEGLLSFDNQ 128
           DDS   EL KQRIK +IT REI  +RM+EAE R E+++E+EL+I R  G TEG L+FD  
Sbjct: 29  DDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEH 88

Query: 129 FLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLN 162
           F +R ++ R+N I D SS R LLA PGS  SLN
Sbjct: 89  FPMRMLDLRLNQIVDQSSSRVLLAAPGSCSSLN 120

[Close]

BLAST of CSPI01G17810.1 vs. NCBI nr
Match: XP_008443847.1 (PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo] >KAA0035096.1 UBP1-associated proteins 1C-like isoform X3 [Cucumis melo var. makuwa] >TYJ95982.1 UBP1-associated proteins 1C-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 4.3e-97
Identity = 209/303 (68.98%), Postives = 225/303 (74.26%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
           MNF FRAIDNKSPATAASTS QP+Q                                   
Sbjct: 1   MNFRFRAIDNKSPATAASTSDQPIQ----------------------------------- 60

Query: 61  KLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTE 120
                   DDSL EELWKQRIKEEIT+REIVR+RM+EAEIRRE+L+ERELAIRR RGQTE
Sbjct: 61  --------DDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRELLVERELAIRRARGQTE 120

Query: 121 GLLSFDNQFLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLNLKK--NRSEDVMNRLITLK 180
           GLLSFDNQFLVRFMN  VN I DPSS  ALLAVPGSN SLNLK+     ED MN+LITL 
Sbjct: 121 GLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLNLKEEPKPEEDEMNKLITL- 180

Query: 181 LEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIGSKKLAKDEFVCSMCN 240
             ERPD GKF+GKRKA G QEA A +GG GERDQ QTIIPTPWIGSKKLAK+EFVCSMCN
Sbjct: 181 --ERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQTIIPTPWIGSKKLAKEEFVCSMCN 240

Query: 241 VKATSEISFNAHINGKKHQAKEGRTQVQQTTREEPNQREEDHKEKLDHPMNNIDKNLVVQ 300
           VKATSEISFNAHINGKKH+AKEGR QVQQTT +EPNQ EED KEKLDHP+ NIDKN  ++
Sbjct: 241 VKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQGEEDLKEKLDHPVKNIDKNPALE 257

Query: 301 KKK 302
           K K
Sbjct: 301 KNK 257

[Close]

BLAST of CSPI01G17810.1 vs. NCBI nr
Match: XP_038880353.1 (zinc finger protein 385B [Benincasa hispida])

HSP 1 Score: 188.7 bits (478), Expect = 7.2e-44
Identity = 148/312 (47.44%), Postives = 177/312 (56.73%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
           M+F FRA DNKSPATA STS                V   D + Q               
Sbjct: 1   MDFRFRANDNKSPATATSTS----------------VRSFDQLLQ--------------- 60

Query: 61  KLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTE 120
                    DSL  EL KQR+K+EI IREI  +RM+EAEIRRE+++E+ELA RRV G+TE
Sbjct: 61  ---------DSLNAELLKQRMKDEIMIREIASRRMLEAEIRRELIIEQELAKRRVEGRTE 120

Query: 121 GLLSFDNQFLVRFMNG-RVN-SIPDPSSFRALLAVPGSNPS----------LNLKKNRSE 180
           GLL FD+QF VR ++  R+N +I DP  FR LL VPGS+ S           N +    +
Sbjct: 121 GLL-FDDQFSVRLLDQIRMNHNIVDP--FRGLLTVPGSSSSPLPVCPVPNPQNEEPKPFD 180

Query: 181 DVMNRLITLKLEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIGSKKLA 240
           D  N+LI L    +PD  KF GKRKAEG  EA        E D  Q   PT WI SKKLA
Sbjct: 181 DKKNKLIVL---PKPDPAKFEGKRKAEG--EA-------AEVDTDQK-TPTHWISSKKLA 240

Query: 241 KDEFVCSMCNVKATSEISFNAHINGKKHQAKEGRTQVQQTTREEPNQREEDHKEKLDHPM 300
           K+EFVCSMCNV+ TSEISFNAH+ GKKH AKEGR+   QT    P    ED KEKLD+  
Sbjct: 241 KEEFVCSMCNVQVTSEISFNAHLKGKKHMAKEGRS--LQTQEPSP---AEDLKEKLDNQK 251

[Close]

BLAST of CSPI01G17810.1 vs. NCBI nr
Match: KAE8653058.1 (hypothetical protein Csa_020056, partial [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-39
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
          MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY
Sbjct: 1  MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60

Query: 61 KLFIVITSDDSLKEELWKQRIKEEITIREI 91
          KLFIVITSDDSLKEELWKQRIKEEITIR+I
Sbjct: 61 KLFIVITSDDSLKEELWKQRIKEEITIRKI 90

[Close]

BLAST of CSPI01G17810.1 vs. NCBI nr
Match: XP_022926958.1 (uncharacterized protein LOC111433915 [Cucurbita moschata])

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-15
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 69  DDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTEGLLSFDNQ 128
           DDS   EL KQRIKEEIT RE   +RM+EAEIRRE+++E+EL+I R  G+TEG L+FD  
Sbjct: 83  DDSPNAELVKQRIKEEITNRETASRRMLEAEIRRELIIEQELSILRATGRTEG-LAFDEH 142

Query: 129 FLVRFMNGRVNSIPDPSSFRALLAVPGSNPSLN 162
           F +R ++ R+N I D SS R LLAVPGS  SLN
Sbjct: 143 FAMRMLDLRLNHIVDQSSSRGLLAVPGSCSSLN 174

[Close]

BLAST of CSPI01G17810.1 vs. NCBI nr
Match: XP_037494531.1 (uncharacterized protein LOC105633612 [Jatropha curcas] >KDP38694.1 hypothetical protein JCGZ_04047 [Jatropha curcas])

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-15
Identity = 94/287 (32.75%), Postives = 133/287 (46.34%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDPITQTFPPASISIIQPVAY 60
           M F FRA+D +   T  S+S     G  S               Q F  A  +I+ P   
Sbjct: 1   MEFKFRAVDGRPRFTYESSS--TTAGYFS--------------EQEFRAAYTNILNP--- 60

Query: 61  KLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQTE 120
                +  ++ L+ E+ K+RI+EEI   EIVR+RM+EAE+RRE+++ERE+A   +R   E
Sbjct: 61  ----ELMRNEMLQREIKKERIREEIITGEIVRRRMLEAEVRRELMMEREMA---MRAGIE 120

Query: 121 GLLSFDNQFLV------------RFMNGRVN---SIPDPSSFRALLAVPGSNPSLNLK-- 180
           G LSF+ +  +            +F N R+      P    F   L  P  + +L     
Sbjct: 121 GGLSFEERLTMGIRPRVSCSLNDQFYNRRLEMRPPFPARGVFDQWLQPPRLSEALVAPDV 180

Query: 181 KNRSEDVMNRLITLKLEERPDSGKFIGKRKAEGYQEATATIGGRGERDQSQTIIPTPWIG 240
           K  SE   +RLI L    +PD      KRKA     AT   G  GE   +         G
Sbjct: 181 KPASEYNQSRLIVL---AKPDPNLCRAKRKA-----ATIPAGDAGELCLA---------G 240

Query: 241 SKKLAKDEFVCSMCNVKATSEISFNAHINGKKHQAKEGRTQVQQTTR 271
            KK  K+E+ C++C V ATSE   N H+ GKKH+AKE R +  +  +
Sbjct: 241 LKKKPKEEWSCALCQVSATSENGLNEHLRGKKHKAKEARLRATKMAK 244

[Close]

BLAST of CSPI01G17810.1 vs. TAIR 10
Match: AT2G24030.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 64/262 (24.43%), Postives = 110/262 (41.98%), Query Frame = 0


Query: 1   MNFTFRAIDNKSPATAASTSHQPLQGNLSLIEMLIFVLPSDP-ITQTFPPASISIIQPVA 60
           M F +RAIDN  P  A  T+  P             + P+ P +++   P   S  Q   
Sbjct: 1   MEFRYRAIDNNRPPPATDTTPSP------------SLKPNFPFLSERSMPGQQSEDQ--- 60

Query: 61  YKLFIVITSDDSLKEELWKQRIKEEITIREIVRQRMMEAEIRREILLERELAIRRVRGQT 120
                     +++K E+ K++I++EI I E  R+R + AE+ +E+ +ERE+AIRRV   T
Sbjct: 61  --------VREAIKREIEKEQIRQEIIIAEAARKRELIAEVLQEMAIEREMAIRRV-SDT 120

Query: 121 EGLL-------------------SFDNQFLVRFMNGRVNSIPDPSSFRALLAVP------ 180
           E  L                    F+N F  ++    ++S+ +  S+ +LL  P      
Sbjct: 121 EMSLEEKLTMWINQRKLPNQNQNQFNNFFRQKY--SYIDSLINTGSYNSLLTSPMMQLPQ 180

Query: 181 ------GSNPSLNLKKNRSEDVMNRLITLKLEERPDSGKFIGKRKAEGYQEATATIGGRG 231
                  +  S+      +  V+NR   +  + + DS   +   K +   EAT T     
Sbjct: 181 LQQMSEATGTSMLESNKENLIVLNRADIIGAKPKADSVGTMQLPKLQQMPEATGTSVLES 236

The following BLAST results are available for this feature:

BLAST of CSPI01G17810.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G17810.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B800	2.1e-97	68.98	UBP1-associated proteins 1C-like isoform X3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B9S7	2.1e-97	68.98	uncharacterized protein LOC103487343 OS=Cucumis melo OX=3656 GN=LOC103487343 PE=...	[more]
A0A6J1EJN4	5.3e-16	60.22	uncharacterized protein LOC111433915 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A067L3P2	1.5e-15	32.75	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04047 PE=4 SV=1	[more]
A0A6J1HN47	4.2e-13	55.91	uncharacterized protein LOC111465139 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI01G17810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443847.1	4.3e-97	68.98	PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo] >KAA0035096.1 UBP...	[more]
XP_038880353.1	7.2e-44	47.44	zinc finger protein 385B [Benincasa hispida]	[more]
KAE8653058.1	5.4e-39	98.89	hypothetical protein Csa_020056, partial [Cucumis sativus]	[more]
XP_022926958.1	1.1e-15	60.22	uncharacterized protein LOC111433915 [Cucurbita moschata]	[more]
XP_037494531.1	3.2e-15	32.75	uncharacterized protein LOC105633612 [Jatropha curcas] >KDP38694.1 hypothetical ...	[more]

BLAST of CSPI01G17810.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24030.1	1.1e-05	24.43	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 229..263 e-value: 4.3E-7 score: 39.6
None	No IPR available	PFAM	PF12874	zf-met	coord: 232..256 e-value: 5.2E-8 score: 33.0
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 218..262 e-value: 7.1E-10 score: 40.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..289
None	No IPR available	PANTHER	PTHR47487	OS06G0651300 PROTEIN-RELATED	coord: 1..283
None	No IPR available	PANTHER	PTHR47487:SF8	OS06G0651300 PROTEIN	coord: 1..283
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 225..259

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G17810	CSPI01G17810	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G17810.1.cds2	CSPI01G17810.1.cds2	CDS
CSPI01G17810.1.cds1	CSPI01G17810.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G17810.1	CSPI01G17810.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding