CSPI01G12590.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI01G12590.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein SINE1-like
Location	Chr1: 8030731 .. 8031778 (+)
Sequence length	866
RNA-Seq Expression	CSPI01G12590.1
Synteny	CSPI01G12590.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTGTATGCCAGCCTCAAAGCATATCACCCTTCGACCAAAGTGGGCCTAGAAGAAGGTATTTGACCTCAATTAAGGTCGAAGATGACTCTGGCCAAATACGAAACATGGGATGTCCCTCAATCAATGATAATATTGAGCCATTTGTGGTTCTTATTAAAGTGGCATGCTCATACTTCTAAGATTGTTAATAAGAAAAGTTTAAGCTTGGCCCCAAAGTGGTCACCTAGAAACAAGTTTATAGGAAAATGGGATCAATATAGTAAATAACAAGAAGAGACCATATTGTTTTTCTAATAAAACGCCTCGGAAGCTTGTCCATTCCCTTCAGGATCTAAACGAGGGGAAATCTGACTATGCTAGCGGAAGTAGCCGATGTAGGCATAGGAGTTTGTCATCAGGGAATTTGGAGTGGAGTCCTCCAAGAGCATTTCTAAATCAAAACGGTTTTGCCGATGAACCAAAACTCAGCAAAGAGGATGAAGATGGCTTAGGCAACGGTAATGGTGAGCAATCACAAGGTAGTTACGAATCGATCTCTTCAGCCGATGGTGCCCCTACCCATGTTGATGTCCAAGCTATACCTGTGGCAGTGGCTTGTCAAAGTAAAATGAAACCTCAATATTATGGCATGGAGATGGCATATAAGAAGACTGCTTTGAAATTGGTATGTGGCTTTTCATTTTTGCTTTTTACAATATTCACTTCATTGCTATGGATTGATGATCACGACCAAGGTTCCTATCTTGTACCAACATAATGTTCTTGTTGTGCTTCAACTAAAATTGGGTTGAAGCTGTTTGTTGTAAGTTTTGTTGAGTTCAAATGTTGTGTGTCAAGTAGCAAGAAAGGCATATAGAAGTTTGAAGCAAAAGCAAATGTATTAGATTAGATGGATTTGGACAATGACTCAATGTAAGAATCCCAGTGTGGTCAATGAAGTTCTTGACTACAATAGGTATCTTTCTACCTTTGCAAATTATAGAATATGCTCGCTTTCTAGATTGATGTTGTAACATTTAGTTTGAATAGAGTACTTAGCTC

mRNA sequence

ATGTTTTGTGTATGCCAGCCTCAAAGCATATCACCCTTCGACCAAAGTGGGCCTAGAAGAAGGTATTTGACCTCAATTAAGGTCGAAGATGACTCTGGCCAAATACGAAACATGGGATGTCCCTCAATCAATGATAATATTGAGCCATTTGTGGATCTAAACGAGGGGAAATCTGACTATGCTAGCGGAAGTAGCCGATGTAGGCATAGGAGTTTGTCATCAGGGAATTTGGAGTGGAGTCCTCCAAGAGCATTTCTAAATCAAAACGGTTTTGCCGATGAACCAAAACTCAGCAAAGAGGATGAAGATGGCTTAGGCAACGGTAATGGTGAGCAATCACAAGGTAGTTACGAATCGATCTCTTCAGCCGATGGTGCCCCTACCCATGTTGATGTCCAAGCTATACCTGTGGCAGTGGCTTGTCAAAGTAAAATGAAACCTCAATATTATGGCATGGAGATGGCATATAAGAAGACTGCTTTGAAATTGGTATGTGGCTTTTCATTTTTGCTTTTTACAATATTCACTTCATTGCTATGGATTGATGATCACGACCAAGGTTCCTATCTTGTACCAACATAATGTTCTTGTTGTGCTTCAACTAAAATTGGGTTGAAGCTGTTTGTTGTAAGTTTTGTTGAGTTCAAATGTTGTGTGTCAAGTAGCAAGAAAGGCATATAGAAGTTTGAAGCAAAAGCAAATGTATTAGATTAGATGGATTTGGACAATGACTCAATGTAAGAATCCCAGTGTGGTCAATGAAGTTCTTGACTACAATAGGTATCTTTCTACCTTTGCAAATTATAGAATATGCTCGCTTTCTAGATTGATGTTGTAACATTTAGTTTGAATAGAGTACTTAGCTC

Coding sequence (CDS)

ATGTTTTGTGTATGCCAGCCTCAAAGCATATCACCCTTCGACCAAAGTGGGCCTAGAAGAAGGTATTTGACCTCAATTAAGGTCGAAGATGACTCTGGCCAAATACGAAACATGGGATGTCCCTCAATCAATGATAATATTGAGCCATTTGTGGATCTAAACGAGGGGAAATCTGACTATGCTAGCGGAAGTAGCCGATGTAGGCATAGGAGTTTGTCATCAGGGAATTTGGAGTGGAGTCCTCCAAGAGCATTTCTAAATCAAAACGGTTTTGCCGATGAACCAAAACTCAGCAAAGAGGATGAAGATGGCTTAGGCAACGGTAATGGTGAGCAATCACAAGGTAGTTACGAATCGATCTCTTCAGCCGATGGTGCCCCTACCCATGTTGATGTCCAAGCTATACCTGTGGCAGTGGCTTGTCAAAGTAAAATGAAACCTCAATATTATGGCATGGAGATGGCATATAAGAAGACTGCTTTGAAATTGGTATGTGGCTTTTCATTTTTGCTTTTTACAATATTCACTTCATTGCTATGGATTGATGATCACGACCAAGGTTCCTATCTTGTACCAACATAA

Protein sequence

MFCVCQPQSISPFDQSGPRRRYLTSIKVEDDSGQIRNMGCPSINDNIEPFVDLNEGKSDYASGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDHDQGSYLVPT*

Homology

[Close]

BLAST of CSPI01G12590.1 vs. ExPASy TrEMBL
Match: A0A0A0KYP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192160 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.3e-75
Identity = 152/189 (80.42%), Postives = 157/189 (83.07%), Query Frame = 0


Query: 13  FDQSGPRRRYLTSIKVEDDSGQIRNMGCPSINDNI--------EPFVDLNEGKSDYASGS 72
           F  S PRRR   S      +  +R+    ++ D I            DLNEGKSDYASGS
Sbjct: 440 FQMSPPRRRLSRS----TTTSPLRSRSYINVEDMIFKTPRKLVHSLQDLNEGKSDYASGS 499

Query: 73  SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD 132
           SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD
Sbjct: 500 SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD 559

Query: 133 GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH 192
           GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH
Sbjct: 560 GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH 619

Query: 193 DQGSYLVPT 194
           DQGSYLVPT
Sbjct: 620 DQGSYLVPT 624

[Close]

BLAST of CSPI01G12590.1 vs. ExPASy TrEMBL
Match: A0A5A7UWA1 (ARM repeat superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00310 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.4e-64
Identity = 140/192 (72.92%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 13  FDQSGPRRRYLTS-----------IKVEDDSGQIRNMGCPSINDNIEPFVDLNEGKSDYA 72
           F  S PRRR   S           IKVED       M   +    +    DLNE  SDYA
Sbjct: 440 FQMSPPRRRLSRSTTTSPLRSRSYIKVED-------MIFKTPRKLVHSLQDLNETNSDYA 499

Query: 73  SGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESIS 132
           SGSSR RHRSLSSGNLEWSPPRAFLN+NG ADE KLSKEDEDGL   NGEQSQGS ESIS
Sbjct: 500 SGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDNGEQSQGSSESIS 559

Query: 133 SADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 192
           S DG PTHVDVQA+PVAV CQSK+KPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI
Sbjct: 560 STDGVPTHVDVQAMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 619

Query: 193 DDHDQGSYLVPT 194
           DDHDQGSYLVPT
Sbjct: 620 DDHDQGSYLVPT 624

[Close]

BLAST of CSPI01G12590.1 vs. ExPASy TrEMBL
Match: A0A5D3CDJ7 (ARM repeat superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00410 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.4e-64
Identity = 140/192 (72.92%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 13  FDQSGPRRRYLTS-----------IKVEDDSGQIRNMGCPSINDNIEPFVDLNEGKSDYA 72
           F  S PRRR   S           IKVED       M   +    +    DLNE  SDYA
Sbjct: 422 FQMSPPRRRLSRSTTTSPLRSRSYIKVED-------MIFKTPRKLVHSLQDLNETNSDYA 481

Query: 73  SGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESIS 132
           SGSSR RHRSLSSGNLEWSPPRAFLN+NG ADE KLSKEDEDGL   NGEQSQGS ESIS
Sbjct: 482 SGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDNGEQSQGSSESIS 541

Query: 133 SADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 192
           S DG PTHVDVQA+PVAV CQSK+KPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI
Sbjct: 542 STDGVPTHVDVQAMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 601

Query: 193 DDHDQGSYLVPT 194
           DDHDQGSYLVPT
Sbjct: 602 DDHDQGSYLVPT 606

[Close]

BLAST of CSPI01G12590.1 vs. ExPASy TrEMBL
Match: A0A1S3B5D3 (uncharacterized protein LOC103485976 OS=Cucumis melo OX=3656 GN=LOC103485976 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.4e-64
Identity = 140/192 (72.92%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 13  FDQSGPRRRYLTS-----------IKVEDDSGQIRNMGCPSINDNIEPFVDLNEGKSDYA 72
           F  S PRRR   S           IKVED       M   +    +    DLNE  SDYA
Sbjct: 440 FQMSPPRRRLSRSTTTSPLRSRSYIKVED-------MIFKTPRKLVHSLQDLNETNSDYA 499

Query: 73  SGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESIS 132
           SGSSR RHRSLSSGNLEWSPPRAFLN+NG ADE KLSKEDEDGL   NGEQSQGS ESIS
Sbjct: 500 SGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDNGEQSQGSSESIS 559

Query: 133 SADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 192
           S DG PTHVDVQA+PVAV CQSK+KPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI
Sbjct: 560 STDGVPTHVDVQAMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 619

Query: 193 DDHDQGSYLVPT 194
           DDHDQGSYLVPT
Sbjct: 620 DDHDQGSYLVPT 624

[Close]

BLAST of CSPI01G12590.1 vs. ExPASy TrEMBL
Match: A0A6J1DQ15 (uncharacterized protein LOC111023161 OS=Momordica charantia OX=3673 GN=LOC111023161 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 100/142 (70.42%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 52  DLNEGKSDYASGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGE 111
           DLNE  SD+AS S R  +RSLSSGNLEWSP  +F NQNGF D+ KLSKED  GL + NGE
Sbjct: 483 DLNEANSDHASKSFRRAYRSLSSGNLEWSPRSSFHNQNGFPDDQKLSKEDVGGL-DINGE 542

Query: 112 QSQGSYESISSADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLL 171
           QSQG  ES+SS DG P H D+QA PV VA QS MK Q  G++MAYKKTALKLVCGFSFLL
Sbjct: 543 QSQGGSESVSSTDGIPAHTDIQATPVEVAYQSNMKTQCSGIDMAYKKTALKLVCGFSFLL 602

Query: 172 FTIFTSLLWIDDHDQGSYLVPT 194
           FT+FTS L I+D DQGSYLVPT
Sbjct: 603 FTVFTSFLLINDQDQGSYLVPT 623

[Close]

BLAST of CSPI01G12590.1 vs. NCBI nr
Match: XP_004147557.1 (protein SINE1 [Cucumis sativus] >KGN53944.1 hypothetical protein Csa_021592 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.9e-74
Identity = 152/189 (80.42%), Postives = 157/189 (83.07%), Query Frame = 0


Query: 13  FDQSGPRRRYLTSIKVEDDSGQIRNMGCPSINDNI--------EPFVDLNEGKSDYASGS 72
           F  S PRRR   S      +  +R+    ++ D I            DLNEGKSDYASGS
Sbjct: 440 FQMSPPRRRLSRS----TTTSPLRSRSYINVEDMIFKTPRKLVHSLQDLNEGKSDYASGS 499

Query: 73  SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD 132
           SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD
Sbjct: 500 SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD 559

Query: 133 GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH 192
           GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH
Sbjct: 560 GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH 619

Query: 193 DQGSYLVPT 194
           DQGSYLVPT
Sbjct: 620 DQGSYLVPT 624

[Close]

BLAST of CSPI01G12590.1 vs. NCBI nr
Match: XP_008441975.1 (PREDICTED: uncharacterized protein LOC103485976 [Cucumis melo] >KAA0060112.1 ARM repeat superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63
Identity = 140/192 (72.92%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 13  FDQSGPRRRYLTS-----------IKVEDDSGQIRNMGCPSINDNIEPFVDLNEGKSDYA 72
           F  S PRRR   S           IKVED       M   +    +    DLNE  SDYA
Sbjct: 440 FQMSPPRRRLSRSTTTSPLRSRSYIKVED-------MIFKTPRKLVHSLQDLNETNSDYA 499

Query: 73  SGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESIS 132
           SGSSR RHRSLSSGNLEWSPPRAFLN+NG ADE KLSKEDEDGL   NGEQSQGS ESIS
Sbjct: 500 SGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDNGEQSQGSSESIS 559

Query: 133 SADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 192
           S DG PTHVDVQA+PVAV CQSK+KPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI
Sbjct: 560 STDGVPTHVDVQAMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 619

Query: 193 DDHDQGSYLVPT 194
           DDHDQGSYLVPT
Sbjct: 620 DDHDQGSYLVPT 624

[Close]

BLAST of CSPI01G12590.1 vs. NCBI nr
Match: TYK08426.1 (ARM repeat superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63
Identity = 140/192 (72.92%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 13  FDQSGPRRRYLTS-----------IKVEDDSGQIRNMGCPSINDNIEPFVDLNEGKSDYA 72
           F  S PRRR   S           IKVED       M   +    +    DLNE  SDYA
Sbjct: 422 FQMSPPRRRLSRSTTTSPLRSRSYIKVED-------MIFKTPRKLVHSLQDLNETNSDYA 481

Query: 73  SGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESIS 132
           SGSSR RHRSLSSGNLEWSPPRAFLN+NG ADE KLSKEDEDGL   NGEQSQGS ESIS
Sbjct: 482 SGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDNGEQSQGSSESIS 541

Query: 133 SADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 192
           S DG PTHVDVQA+PVAV CQSK+KPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI
Sbjct: 542 STDGVPTHVDVQAMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWI 601

Query: 193 DDHDQGSYLVPT 194
           DDHDQGSYLVPT
Sbjct: 602 DDHDQGSYLVPT 606

[Close]

BLAST of CSPI01G12590.1 vs. NCBI nr
Match: XP_038883420.1 (protein SINE1 [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-56
Identity = 127/189 (67.20%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 13  FDQSGPRRRYLTSIKVEDDSGQIRNMGCPSINDNI--------EPFVDLNEGKSDYASGS 72
           F  S PRRR   S      +  +R+ G  ++ D I        +   DLNE  S+Y S S
Sbjct: 440 FQMSPPRRRLSRS----TTTSPLRSRGYINVEDMIFKTPRKLVQSLQDLNEANSEYGSKS 499

Query: 73  SRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGEQSQGSYESISSAD 132
           SR RHRSLSSGNLEWSPPR+FLNQ  F D+ K SKED  GL N   EQSQGS ESISS+D
Sbjct: 500 SRRRHRSLSSGNLEWSPPRSFLNQK-FPDDQKPSKEDGGGLDNDKSEQSQGSSESISSSD 559

Query: 133 GAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH 192
           G PTH DV+AIPVAVACQSK+KPQY GMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH
Sbjct: 560 GVPTHGDVEAIPVAVACQSKIKPQYSGMEMAYKKTALKLVCGFSFLLFTIFTSLLWIDDH 619

Query: 193 DQGSYLVPT 194
           DQGSYLVPT
Sbjct: 620 DQGSYLVPT 623

[Close]

BLAST of CSPI01G12590.1 vs. NCBI nr
Match: XP_022156223.1 (uncharacterized protein LOC111023161 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 5.1e-43
Identity = 100/142 (70.42%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 52  DLNEGKSDYASGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGNGE 111
           DLNE  SD+AS S R  +RSLSSGNLEWSP  +F NQNGF D+ KLSKED  GL + NGE
Sbjct: 483 DLNEANSDHASKSFRRAYRSLSSGNLEWSPRSSFHNQNGFPDDQKLSKEDVGGL-DINGE 542

Query: 112 QSQGSYESISSADGAPTHVDVQAIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFSFLL 171
           QSQG  ES+SS DG P H D+QA PV VA QS MK Q  G++MAYKKTALKLVCGFSFLL
Sbjct: 543 QSQGGSESVSSTDGIPAHTDIQATPVEVAYQSNMKTQCSGIDMAYKKTALKLVCGFSFLL 602

Query: 172 FTIFTSLLWIDDHDQGSYLVPT 194
           FT+FTS L I+D DQGSYLVPT
Sbjct: 603 FTVFTSFLLINDQDQGSYLVPT 623

The following BLAST results are available for this feature:

BLAST of CSPI01G12590.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G12590.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYP2	9.3e-75	80.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192160 PE=4 SV=1	[more]
A0A5A7UWA1	7.4e-64	72.92	ARM repeat superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CDJ7	7.4e-64	72.92	ARM repeat superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B5D3	7.4e-64	72.92	uncharacterized protein LOC103485976 OS=Cucumis melo OX=3656 GN=LOC103485976 PE=...	[more]
A0A6J1DQ15	2.5e-43	70.42	uncharacterized protein LOC111023161 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of CSPI01G12590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147557.1	1.9e-74	80.42	protein SINE1 [Cucumis sativus] >KGN53944.1 hypothetical protein Csa_021592 [Cuc...	[more]
XP_008441975.1	1.5e-63	72.92	PREDICTED: uncharacterized protein LOC103485976 [Cucumis melo] >KAA0060112.1 ARM...	[more]
TYK08426.1	1.5e-63	72.92	ARM repeat superfamily protein [Cucumis melo var. makuwa]	[more]
XP_038883420.1	5.3e-56	67.20	protein SINE1 [Benincasa hispida]	[more]
XP_022156223.1	5.1e-43	70.42	uncharacterized protein LOC111023161 [Momordica charantia]	[more]

BLAST of CSPI01G12590.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G12590	CSPI01G12590	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G12590.1.cds1	CSPI01G12590.1.cds1	CDS
CSPI01G12590.1.cds2	CSPI01G12590.1.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G12590.1.utr3p1	CSPI01G12590.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G12590.1	CSPI01G12590.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0032797	SMN complex