BhiUN245M6 (mRNA) Wax gourd (B227) v1

Overview


Name	BhiUN245M6
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	rRNA-processing protein FYV7
Location	Contig245: 199883 .. 204122 (-)
Sequence length	1832
RNA-Seq Expression	BhiUN245M6
Synteny	BhiUN245M6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAATATTAACATTAAAATAACGTAAATAATAATTTGAAACCATCTCCTCGGATTTCCCCTTTCTTCTCCGTTTTTGACCTAATTCTTTCAAGCTCTCCGCAAACAATGAAGAATCCCACTGGAAAAGACGAAGATCAGAATCGCTCTAATTCGAAATTCATGAAGAGCAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTCGCGAATGCTAAATCAACCACCGATTACTATAATCCGGCTTTGATAAGTATGATACTGCTCAACTTTTGTTTACCTTTTATTTTTTTGTCAGGATGGCCGAGTGTTCTAAGTATCCTTTTAAGTTTACTTCTCACTTGTTGATAGTTCTGTAGAATCTAGATTTTGGGCTCTTTGTTTAGTTGTTATGGGATCGAAATATTGTTGCAATTCCAATATATTGGGGGAGAATGAAAAATGTGTATTCATTGTGTTCTATTTTGTGTTTAGAAGGGGGATTACATTGCAAAATTTTGGAAATTGGATACTGGAGACTGGATATAAGTGAATTTCTTCTGGTGTTATAACAGATTTATGAATTTTGTTGGTCTTTGTTTATGGTAGTGATTGACTCTTATGTATGTATCTTCTGTTCAGAAAAGCAAAGAGAGTTCTATAAAAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTGAAGTATCAGAATCAGCAGAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTTGAGGTATGACTGTATGATGAGTATCTAATATCGCCTAAAACTTCGATTATATTGGTTAACTTTCAGTGCTTGGTGAGTTTTGGACTCTTGAGATGCCTTTCTTTTTGTCGAATGAGAAAATAGTATTGTAAAATATTGCATTACATGATCTGTTGCAAGTGTTCCTATAGAGAGAGAGGGAGGGAGCTTTGTTTTCTTTTTGGTTATGGATAGGCATTCAACCCAATGAGCAGCTATTTCATTCCATTCTTGTTGTCGAGAGAGAGAGGAGCTTTGTTTCTTTTTGTTTGTTGAAGTTTTTTCATTTTCTCTCATAAAAGAAAAAAAAAGGTTTTTTCATTTTCAGGTGCCTCTTCTCACTATTTGTTTATTGTGATTTGAGTAGACATTGAACCTAACGACCATCTGTTTCATTTGATTCTTATAATCCAAAAAAAAAAAATCCAATTGTTTTGAACTTTTTTAGAATGGAATATTTATGGAAGTTAAGGTTCCCTATATTGGAGAGTGGAAGGGGACATCTCTATTTAATATCATAAAGGATGGGAATGAAGAACTGGTGCCCGTTCCATGCATCTTGAGCAGAGAGCTAACCTGGAATGAGATGCATTTGAATAAAAGAATGAACTCAACCAAAGAACTACAATTGACAAGACCATGATTTGAAAGAAGAACAAAAAACAAGAGATTATTTTTTGTCGAGAACCCTGGAAAATAAAATCGAAATTGTCGAAAGCTTTGCGAGAAAGAGTGGAGCACTGTTTCCTTTTGTTTGTTGAAGTGCATGTTACTTAAGGTGTTCAGAAAATTCGATGAACCCTACCCATAGAGTTTTTAGTTGGGTTATATAATGGTTTGAGTTAGGTTAATTTAAATGAAAACAGGTAGGCTAGATTGGTTTATGAGTTTACTTAAAAATCAGTTTAGTTGATTAAAACATATTTATTCTCCAACCACTTCTTAAAATTTTTTAGTGTTTATTTTTCGTTTCATAATATAAAATGGCGTTGAGTGAGTTACTAGTGTTGTTGAAGTGAGCCAAGGTGCTCACTTACTATTTAGGGAGGCTGCCAATATGTGGTGGGTAGTTATTTGGATGCTAACTAGCTAGAAAAACTATTTGGGAAGGGCCACTACAATGTGGCTGATAGTTATTAGTGAACCTCCAAATTTTTAATGTACATCCTTTCGTTATTAAAACCTGACCATATTGTGGCGGTCTCATTGAATAACTCATTTCCCAACTAACACTTACCACCTAATGGCGAGGTCCTTGAAGTTATGATGCCATGGTGTGCCATCACCGATAGGCATGGGAGTACCATGTTGAAGGCAGGCTTGATGGGCTTTCTCTAAAAAAAATAAAGAAATCCTTGGTAGCCCACGGAACATAAAAGGCTGTCTCCCTTATGGGGAGAGAAAAGTAAGAAGGGGACGAAGGGAGCTGATCGGAAGAGAATGAGTAAAAAATTCAAGATAAAATTCTAGTTTTTTTAATCTATTATTTATTAATTAATAATAATTATTAGGTACGCCTGCATCATTTAGTTGATTCCTTTTGGTTTAGTAGATTCCTTTTGGTTGCCACGTGCCTCAAGGCGATTTTGGAGATTCGTCGCCTTAAAGATACATCGATTACTTTGAATATAGTGAGTTACTAATCTTAATTCAATGTTTGAGAATGGATAGATAAAGGTTTCAGATATTAATATTTTACTATTTCTTTTGTTAAACAGAATTTTGTGTAAGCGACCTAAGTAATCATAACGTACTCTACCCGTTGGTTTGGAATGTTTCATTACTTTATTGTGGTTGTTTCGTTGAAAAAGTTTACAATCCGAAGTCCGAACAATTGGGTTTGATCTAAAGTATAAATCCATCTAATCCAAACCAACCAACTCCCATGAATTCCCTTTGTCATTGCTCATTTATTGTGATCTGAACGAGCATCTGTTTCATTCCATTCTTGTTATAAAAAGAATCTGCTGTGCAAATGTGCTGCTTGAACTATCAGCTGACTCACTTTATTTCTGGTTCATAAAGGATGAAAATGAAACAAAATTCGAGAATCATACGAACGGCAGACGTGGGAAAGAAAGGAATAAAGGTGTACCTAGTCTCCAGGCACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATTGCTGCAAAAAAGGAAGAACAAGAAAGGGCTAAAGCTAGACGAAACGCTACAAGAGAAAAAATGTTCAAAAGAACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAGACTATTGGTGGAGCCTCGATGAAGCACTGAGGCCTTTGGTTTTTTTCAATGAACTTTGTAGAAGAATTTTTTGTCGCTTTAGGAATGTATATTTTCTCTTGTACCTTTAGTTTGCTTCATTATTCAATCAAATGATTCCAGTGTATTACAATTTTTAATCTAATCTAAATAATCCAAATGCTTAATATTATCATATTGCCGTCCATTTGCAAGTGTTTGGATGTATGTCTCTGAGCTTTTTGTTGAATGTTCAATGAGAAATGATTCTTTTCTCTTCCAATTAGGTGTTCAAACACGTAAAGTCCCTTTCATAATGTTTCTTAAAGAATCTCGACTTATTTATAACGTCATATTACCTTTTCAGAGGTAGGACGACATGGTTGACTCTGTGTTATCAAGTAGTCTCTCTTTCTCACATATAGATACATAATTACATACACACACAAATGGTTGAATGTTCGTGATGCATCGGTCACAAGAAGGTTTAAGGAGAATCAGAATGGATTCATCATCTAAGCGATTAGCCAACAACATTACAGTATCATAGAATTCAGCATGAGAAGAAGGTTTTCATTAGAATTGGAATTGGTATGTTCTGAATGAAACAACTCAGCATCTAAGAATTGGTTTCTTTTGAAAATTGAGATTACCCAACAAATTACAGTATAAAAGATGACTTTCCAAATAGAAAGGTGAATCTACAAAGAAAGATTAATAGCATACAAGAAACGAACTCGGAAAGCTTCGCCCTTTGGGACGATCAGAGTTGAGACTCAAGGCCAATGATGGATAATATAAGCTCGGCGCGGTTGAGGCTGGCAGATGACCATGAGGGTGAGAGCTATAACAATGGCCATCATAAGTCCCATAAGATCCAATCCTCCACCATCATCATCAGCAGAGCAACAAAGCTTCCCCATCTAATTTTACAGAGCAAAAAGAACTTCCTTCCCAACAAAGCCTCAAATTCAGCCTTATGAATCAATTTCCTCTAATTAATAAAGATGTAAACATTTGTGTCAATGTCAATAGCTGACCTCAAAAGAGGGCCCCATATGACAATTGTAGACTTAGAAATGTCTCAAGTCTTTGTTAATCTTTGTTTTTAGCCTACCAATTGGTTCTCCTTGCCTTTTTATTTATCATTTTATCTTCTCAAGGGGAAAATTAAGGGGG

mRNA sequence

AATAATATTAACATTAAAATAACGTAAATAATAATTTGAAACCATCTCCTCGGATTTCCCCTTTCTTCTCCGTTTTTGACCTAATTCTTTCAAGCTCTCCGCAAACAATGAAGAATCCCACTGGAAAAGACGAAGATCAGAATCGCTCTAATTCGAAATTCATGAAGAGCAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTCGCGAATGCTAAATCAACCACCGATTACTATAATCCGGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAAAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTGAAGTATCAGAATCAGCAGAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTTGAGGATGAAAATGAAACAAAATTCGAGAATCATACGAACGGCAGACGTGGGAAAGAAAGGAATAAAGGTGTACCTAGTCTCCAGGCACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATTGCTGCAAAAAAGGAAGAACAAGAAAGGGCTAAAGCTAGACGAAACGCTACAAGAGAAAAAATGTTCAAAAGAACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAGACTATTGGTGGAGCCTCGATGAAGCACTGAGGCCTTTGGTTTTTTTCAATGAACTTTGTAGAAGAATTTTTTGTCGCTTTAGGAATGTATATTTTCTCTTGTACCTTTAGTTTGCTTCATTATTCAATCAAATGATTCCAGTGTATTACAATTTTTAATCTAATCTAAATAATCCAAATGCTTAATATTATCATATTGCCGTCCATTTGCAAGTGTTTGGATGTATGTCTCTGAGCTTTTTGTTGAATGTTCAATGAGAAATGATTCTTTTCTCTTCCAATTAGGTGTTCAAACACGTAAAGTCCCTTTCATAATGTTTCTTAAAGAATCTCGACTTATTTATAACGTCATATTACCTTTTCAGAGGTAGGACGACATGGTTGACTCTGTGTTATCAAGTAGTCTCTCTTTCTCACATATAGATACATAATTACATACACACACAAATGGTTGAATGTTCGTGATGCATCGGTCACAAGAAGGTTTAAGGAGAATCAGAATGGATTCATCATCTAAGCGATTAGCCAACAACATTACAGTATCATAGAATTCAGCATGAGAAGAAGGTTTTCATTAGAATTGGAATTGGTATGTTCTGAATGAAACAACTCAGCATCTAAGAATTGGTTTCTTTTGAAAATTGAGATTACCCAACAAATTACAGTATAAAAGATGACTTTCCAAATAGAAAGGTGAATCTACAAAGAAAGATTAATAGCATACAAGAAACGAACTCGGAAAGCTTCGCCCTTTGGGACGATCAGAGTTGAGACTCAAGGCCAATGATGGATAATATAAGCTCGGCGCGGTTGAGGCTGGCAGATGACCATGAGGGTGAGAGCTATAACAATGGCCATCATAAGTCCCATAAGATCCAATCCTCCACCATCATCATCAGCAGAGCAACAAAGCTTCCCCATCTAATTTTACAGAGCAAAAAGAACTTCCTTCCCAACAAAGCCTCAAATTCAGCCTTATGAATCAATTTCCTCTAATTAATAAAGATGTAAACATTTGTGTCAATGTCAATAGCTGACCTCAAAAGAGGGCCCCATATGACAATTGTAGACTTAGAAATGTCTCAAGTCTTTGTTAATCTTTGTTTTTAGCCTACCAATTGGTTCTCCTTGCCTTTTTATTTATCATTTTATCTTCTCAAGGGGAAAATTAAGGGGG

Coding sequence (CDS)

ATGAAGAATCCCACTGGAAAAGACGAAGATCAGAATCGCTCTAATTCGAAATTCATGAAGAGCAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTCGCGAATGCTAAATCAACCACCGATTACTATAATCCGGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAAAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTGAAGTATCAGAATCAGCAGAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTTGAGGATGAAAATGAAACAAAATTCGAGAATCATACGAACGGCAGACGTGGGAAAGAAAGGAATAAAGGTGTACCTAGTCTCCAGGCACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATTGCTGCAAAAAAGGAAGAACAAGAAAGGGCTAAAGCTAGACGAAACGCTACAAGAGAAAAAATGTTCAAAAGAACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAGACTATTGGTGGAGCCTCGATGAAGCACTGA

Protein sequence

MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEHLLETIGGASMKH

Homology

[Close]

BLAST of BhiUN245M6 vs. TAIR 10
Match: AT4G03180.1 (CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-33
Identity = 84/179 (46.93%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 7   KDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAK 66
           ++ D     SK  ++KK KNM+RLGG GLSL+ FAN KS  + YNP+LIKKQ+EFYKNAK
Sbjct: 6   QNADHETDKSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAK 65

Query: 67  HVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSLQALYER 126
           +VSK++K +K QN  ++  +  T  + +D+++ K +  +N R G         ++ LY++
Sbjct: 66  YVSKFRKSLKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRIG---------VEDLYKQ 125

Query: 127 KHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEHLLETI 186
             EE E+ R E+EA+  AKKE +E A++RR   + KM ++T+ GQPVMKYRIEHLLE+I
Sbjct: 126 TREEMERVRKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESI 175

[Close]

BLAST of BhiUN245M6 vs. NCBI nr
Match: XP_038876713.1 (uncharacterized protein LOC120069103 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.3e-95
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL
Sbjct: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETIGGASMKH
Sbjct: 181 LLETIGGASMKH 192

[Close]

BLAST of BhiUN245M6 vs. NCBI nr
Match: XP_008451439.1 (PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 8.0e-81
Identity = 171/192 (89.06%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKNP GK E +NRS SKFM + KH N+KRLGGK LSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QNQQNERPSSSTVGLVE ENETKFEN TNGR GKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           QALYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GAS  H
Sbjct: 181 LLETI-GASTNH 191

[Close]

BLAST of BhiUN245M6 vs. NCBI nr
Match: XP_022960530.1 (uncharacterized protein LOC111461241 [Cucurbita moschata])

HSP 1 Score: 306.2 bits (783), Expect = 2.0e-79
Identity = 168/192 (87.50%), Postives = 177/192 (92.19%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKN  GKDE+Q RS SKFMK+ KHKNMKRLGGKG S +AFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QN QNERPSSS+VGLVE ENE KFEN TNGRRG ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GASM H
Sbjct: 181 LLETI-GASMNH 191

[Close]

BLAST of BhiUN245M6 vs. NCBI nr
Match: KAG6593160.1 (hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025559.1 hypothetical protein SDJN02_12055 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.7 bits (779), Expect = 5.7e-79
Identity = 167/192 (86.98%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKN  GKDE+Q RS SKFMK+ KHKNMKRLGGKG S +AFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QN QNERPSSS+VGLVE ENE  FEN TNGRRG ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMNFENQTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GASM H
Sbjct: 181 LLETI-GASMNH 191

[Close]

BLAST of BhiUN245M6 vs. NCBI nr
Match: XP_023004670.1 (uncharacterized protein LOC111497895 [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-78
Identity = 166/192 (86.46%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKN  GKDE+Q RS SKF K  KHKNMKRLGGKG S +AFANAKSTTDYYNPA IKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFTKGNKHKNMKRLGGKGPSPQAFANAKSTTDYYNPAFIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QN QNERPS+STVGLVE ENE KFEN TNGRRG ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSNSTVGLVEGENEMKFENRTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GASM H
Sbjct: 181 LLETI-GASMNH 191

[Close]

BLAST of BhiUN245M6 vs. ExPASy TrEMBL
Match: A0A1S3BRH3 (uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.9e-81
Identity = 171/192 (89.06%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKNP GK E +NRS SKFM + KH N+KRLGGK LSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QNQQNERPSSSTVGLVE ENETKFEN TNGR GKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           QALYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GAS  H
Sbjct: 181 LLETI-GASTNH 191

[Close]

BLAST of BhiUN245M6 vs. ExPASy TrEMBL
Match: A0A6J1H9B9 (uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC111461241 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.5e-80
Identity = 168/192 (87.50%), Postives = 177/192 (92.19%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKN  GKDE+Q RS SKFMK+ KHKNMKRLGGKG S +AFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QN QNERPSSS+VGLVE ENE KFEN TNGRRG ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GASM H
Sbjct: 181 LLETI-GASMNH 191

[Close]

BLAST of BhiUN245M6 vs. ExPASy TrEMBL
Match: A0A6J1KV89 (uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 166/192 (86.46%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKN  GKDE+Q RS SKF K  KHKNMKRLGGKG S +AFANAKSTTDYYNPA IKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFTKGNKHKNMKRLGGKGPSPQAFANAKSTTDYYNPAFIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QN QNERPS+STVGLVE ENE KFEN TNGRRG ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSNSTVGLVEGENEMKFENRTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GASM H
Sbjct: 181 LLETI-GASMNH 191

[Close]

BLAST of BhiUN245M6 vs. ExPASy TrEMBL
Match: A0A6J1GP14 (uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC111455827 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 165/188 (87.77%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK  TG+DE QNR  S FMK+KKHKNMKRLGGKGLSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHVSKYKKLVK+QN  NERPSSSTVGLVE EN TK EN TNGRRGKERNKG+PSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEEQERAKARRN TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGA 189
           LL+TIG +
Sbjct: 181 LLKTIGAS 188

[Close]

BLAST of BhiUN245M6 vs. ExPASy TrEMBL
Match: A0A0A0K7L3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.9e-78
Identity = 167/192 (86.98%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK+  GK E  NRS SKFM + KH N+KRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120
           FYKNAKHV+KYKKLVK+QNQ NERPSSSTV LVE ENETKFEN TN R GKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180
           QALYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGGASMKH 193
           LLETI GAS  H
Sbjct: 181 LLETI-GASTNH 191

The following BLAST results are available for this feature:

BLAST of BhiUN245M6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03180.1	3.9e-33	46.93	CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast ...	[more]

BLAST of BhiUN245M6 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of BhiUN245M6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876713.1	3.3e-95	100.00	uncharacterized protein LOC120069103 [Benincasa hispida]	[more]
XP_008451439.1	8.0e-81	89.06	PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]	[more]
XP_022960530.1	2.0e-79	87.50	uncharacterized protein LOC111461241 [Cucurbita moschata]	[more]
KAG6593160.1	5.7e-79	86.98	hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004670.1	2.2e-78	86.46	uncharacterized protein LOC111497895 [Cucurbita maxima]	[more]

BLAST of BhiUN245M6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRH3	3.9e-81	89.06	uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=...	[more]
A0A6J1H9B9	9.5e-80	87.50	uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A6J1KV89	1.1e-78	86.46	uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895...	[more]
A0A6J1GP14	1.8e-78	87.77	uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A0A0K7L3	8.9e-78	86.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..171
IPR013730	Fyv7/TAP26	PFAM	PF08524	rRNA_processing	coord: 55..185 e-value: 3.7E-12 score: 46.5
IPR013730	Fyv7/TAP26	PANTHER	PTHR15657	UNCHARACTERIZED	coord: 1..188

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
BhiUN245G6	BhiUN245G6	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
BhiUN245M6.exon3	BhiUN245M6.exon3	exon
BhiUN245M6.exon2	BhiUN245M6.exon2	exon
BhiUN245M6.exon1	BhiUN245M6.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
BhiUN245M6.utr3p1	BhiUN245M6.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.BhiUN245M6	cds.BhiUN245M6_3	CDS
cds.BhiUN245M6	cds.BhiUN245M6_2	CDS
cds.BhiUN245M6	cds.BhiUN245M6	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
BhiUN245M6.utr5p1	BhiUN245M6.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
BhiUN245M6	BhiUN245M6-protein	polypeptide