Bhi11M002034 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi11M002034
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	MADS-box transcription factor 50-like
Location	chr11: 65812436 .. 65812999 (+)
Sequence length	564
RNA-Seq Expression	Bhi11M002034
Synteny	Bhi11M002034

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGAATTTGAATGATAAAATTGGGGGAAGTAGTAGCAGTATGGTGGGGGAGTTAGGGATTGTTCAATCGGAAGTGAATATGGGCGATTTGATGAATGGAGGAAATTCGATGGTGGGAATTGGCGAATTAGGCGGAACGGAAACGATTATTGTTGAAGGAGATGGCGATGAGAACATTTTGTTATCGGAGTGGAATTTTGGGGTAAATAACAATTCTGGAATGAGTGAGATTGAGAAGCTTGTGAACGACATTAATGGCGTTGGAGTTGAGGCTACTGTTAGTCCTATGGATTTCACTCACCAAGTCGGTTTTGGAATCGATGGTGACGTCAATGATGGAGACCCTATGGGAAGTCTGTATTCCGATGGCTGCTACTATGGCGACGGTGGTAGTGTAGGGATTGATATGAATGATGATGCAGAGATGTTGCTTCAAGGATTGTTTGAAAGTGGAATAAGCTGTAGCAATGGAAATGGAAATGAGAATAAGAATAATGAAGGTAAAGACGTTAAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA

mRNA sequence

ATGGTGATGAATTTGAATGATAAAATTGGGGGAAGTAGTAGCAGTATGGTGGGGGAGTTAGGGATTGTTCAATCGGAAGTGAATATGGGCGATTTGATGAATGGAGGAAATTCGATGGTGGGAATTGGCGAATTAGGCGGAACGGAAACGATTATTGTTGAAGGAGATGGCGATGAGAACATTTTGTTATCGGAGTGGAATTTTGGGGTAAATAACAATTCTGGAATGAGTGAGATTGAGAAGCTTGTGAACGACATTAATGGCGTTGGAGTTGAGGCTACTGTTAGTCCTATGGATTTCACTCACCAAGTCGGTTTTGGAATCGATGGTGACGTCAATGATGGAGACCCTATGGGAAGTCTGTATTCCGATGGCTGCTACTATGGCGACGGTGGTAGTGTAGGGATTGATATGAATGATGATGCAGAGATGTTGCTTCAAGGATTGTTTGAAAGTGGAATAAGCTGTAGCAATGGAAATGGAAATGAGAATAAGAATAATGAAGGTAAAGACGTTAAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA

Coding sequence (CDS)

ATGGTGATGAATTTGAATGATAAAATTGGGGGAAGTAGTAGCAGTATGGTGGGGGAGTTAGGGATTGTTCAATCGGAAGTGAATATGGGCGATTTGATGAATGGAGGAAATTCGATGGTGGGAATTGGCGAATTAGGCGGAACGGAAACGATTATTGTTGAAGGAGATGGCGATGAGAACATTTTGTTATCGGAGTGGAATTTTGGGGTAAATAACAATTCTGGAATGAGTGAGATTGAGAAGCTTGTGAACGACATTAATGGCGTTGGAGTTGAGGCTACTGTTAGTCCTATGGATTTCACTCACCAAGTCGGTTTTGGAATCGATGGTGACGTCAATGATGGAGACCCTATGGGAAGTCTGTATTCCGATGGCTGCTACTATGGCGACGGTGGTAGTGTAGGGATTGATATGAATGATGATGCAGAGATGTTGCTTCAAGGATTGTTTGAAAGTGGAATAAGCTGTAGCAATGGAAATGGAAATGAGAATAAGAATAATGAAGGTAAAGACGTTAAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA

Protein sequence

MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDENILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTHQVGFGIDGDVNDGDPMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNENKNNEGKDVKDDLLSKEWQNNFTP

Homology

[Close]

BLAST of Bhi11M002034 vs. NCBI nr
Match: XP_038904450.1 (MADS-box transcription factor PHERES 1-like [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 7.3e-55
Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
           MVMN  DKIGGSSSSMV ELG VQSEVNMGDLMNGGNSMV IGELGGTETIIVEGDGDEN
Sbjct: 200 MVMNSIDKIGGSSSSMVEELGFVQSEVNMGDLMNGGNSMVEIGELGGTETIIVEGDGDEN 259

Query: 61  ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTHQVGFGIDGDVNDGDPMGS 120
           ILLSEWNFGVN+N GMSEIEKLVNDIN VGVEATVSP+DFTHQVGFGI GDVNDGDP G 
Sbjct: 260 ILLSEWNFGVNDNFGMSEIEKLVNDINAVGVEATVSPIDFTHQVGFGIGGDVNDGDPTGI 319

Query: 121 LYSDGCYY 129
           LY DGCYY
Sbjct: 320 LYFDGCYY 327

[Close]

BLAST of Bhi11M002034 vs. NCBI nr
Match: KAA0043801.1 (MADS-box transcription factor 50-like [Cucumis melo var. makuwa] >TYK25332.1 MADS-box transcription factor 50-like [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-47
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
           MVMN NDKIGGSSSSM GELG VQ+E N  DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 191 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 250

Query: 61  NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
           N LLSEWNFG N++SGMSEIEKLVNDI GVG  VE   S MD +H+ G FGI+ +V  G 
Sbjct: 251 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 310

Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
           PMGS+Y+D          G+++NDDAEM+L GL+E+GIS     N NGN      E+   
Sbjct: 311 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 370

Query: 181 EGKDVKDDLLSKEWQNNFTP 188
           E +D +DDLLSKEW NNFTP
Sbjct: 371 EDEDDEDDLLSKEWSNNFTP 379

[Close]

BLAST of Bhi11M002034 vs. NCBI nr
Match: XP_008442937.1 (PREDICTED: uncharacterized protein LOC103486691 [Cucumis melo])

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-47
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
           MVMN NDKIGGSSSSM GELG VQ+E N  DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 198 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 257

Query: 61  NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
           N LLSEWNFG N++SGMSEIEKLVNDI GVG  VE   S MD +H+ G FGI+ +V  G 
Sbjct: 258 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 317

Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
           PMGS+Y+D          G+++NDDAEM+L GL+E+GIS     N NGN      E+   
Sbjct: 318 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 377

Query: 181 EGKDVKDDLLSKEWQNNFTP 188
           E +D +DDLLSKEW NNFTP
Sbjct: 378 EDEDDEDDLLSKEWSNNFTP 386

[Close]

BLAST of Bhi11M002034 vs. NCBI nr
Match: XP_004136717.1 (uncharacterized protein LOC101219702 [Cucumis sativus] >KGN59225.1 hypothetical protein Csa_000777 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 5.8e-44
Identity = 116/199 (58.29%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLM--NGGNSMVGIGELGGTETIIVEGDGD 60
           MVMN NDK GGSSSSM GELG VQSE N  D+M   GGNSM+   E+GGT TIIVEGDG+
Sbjct: 199 MVMNTNDKTGGSSSSMAGELGFVQSEGNGVDMMTNGGGNSMMEASEIGGTGTIIVEGDGE 258

Query: 61  ENILLSEWNFGVNNNSGMSEIEKLVNDINGVG-VEATVSPMDFTH-QVGFGIDGDVNDGD 120
           EN LLSEWNFG N++ GMSEIEKLVNDI GVG  E   S MD +H Q  FGI  D N G 
Sbjct: 259 ENNLLSEWNFGGNDDCGMSEIEKLVNDIGGVGHAELNASSMDLSHAQADFGI--DCNVGG 318

Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGNENKNN------ 180
           PMGSL++D          G+D+NDD EM+L GLFE+ I+ +   N NGN+  N       
Sbjct: 319 PMGSLFTD----------GVDVNDDGEMMLSGLFENEITENENVNQNGNDQNNEEEDEEV 378

Query: 181 EGKDVKDDLLSKEWQNNFT 187
           E +D +DD+LSKEW NNF+
Sbjct: 379 EDEDDEDDILSKEWSNNFS 385

[Close]

BLAST of Bhi11M002034 vs. NCBI nr
Match: XP_023539789.1 (uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-28
Identity = 96/196 (48.98%), Postives = 115/196 (58.67%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
           MVMN NDKIGGSSSSM GELG  QSE N+     GGNSM+ + +LGG  TI  EGD DEN
Sbjct: 199 MVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEVVDLGGRTTITAEGDMDEN 258

Query: 61  ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTH-QVGFGIDGDVNDGDPMG 120
            LL +WNFG     GMSEIEKLV+++   GV+   SPMD  + Q  +GI GD        
Sbjct: 259 NLLCDWNFG-GTGCGMSEIEKLVSNLG--GVDDNASPMDLANPQANYGIIGD-------- 318

Query: 121 SLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNE--------NKNNEGKD 180
                    GDG SV      +AEM+L GLF SG    + NG E        N+  E ++
Sbjct: 319 --------GGDGASV------EAEMMLHGLFGSGTRSRSSNGTENETLIEKVNEEEEEEE 363

Query: 181 VKDDLLSKEWQNNFTP 188
            +DDLL+KEW NNFTP
Sbjct: 379 DEDDLLNKEWPNNFTP 363

[Close]

BLAST of Bhi11M002034 vs. ExPASy TrEMBL
Match: A0A5A7TQH1 (MADS-box transcription factor 50-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004710 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
           MVMN NDKIGGSSSSM GELG VQ+E N  DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 191 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 250

Query: 61  NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
           N LLSEWNFG N++SGMSEIEKLVNDI GVG  VE   S MD +H+ G FGI+ +V  G 
Sbjct: 251 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 310

Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
           PMGS+Y+D          G+++NDDAEM+L GL+E+GIS     N NGN      E+   
Sbjct: 311 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 370

Query: 181 EGKDVKDDLLSKEWQNNFTP 188
           E +D +DDLLSKEW NNFTP
Sbjct: 371 EDEDDEDDLLSKEWSNNFTP 379

[Close]

BLAST of Bhi11M002034 vs. ExPASy TrEMBL
Match: A0A1S3B6W2 (uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
           MVMN NDKIGGSSSSM GELG VQ+E N  DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 198 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 257

Query: 61  NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
           N LLSEWNFG N++SGMSEIEKLVNDI GVG  VE   S MD +H+ G FGI+ +V  G 
Sbjct: 258 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 317

Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
           PMGS+Y+D          G+++NDDAEM+L GL+E+GIS     N NGN      E+   
Sbjct: 318 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 377

Query: 181 EGKDVKDDLLSKEWQNNFTP 188
           E +D +DDLLSKEW NNFTP
Sbjct: 378 EDEDDEDDLLSKEWSNNFTP 386

[Close]

BLAST of Bhi11M002034 vs. ExPASy TrEMBL
Match: A0A0A0LB39 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.8e-44
Identity = 116/199 (58.29%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLM--NGGNSMVGIGELGGTETIIVEGDGD 60
           MVMN NDK GGSSSSM GELG VQSE N  D+M   GGNSM+   E+GGT TIIVEGDG+
Sbjct: 199 MVMNTNDKTGGSSSSMAGELGFVQSEGNGVDMMTNGGGNSMMEASEIGGTGTIIVEGDGE 258

Query: 61  ENILLSEWNFGVNNNSGMSEIEKLVNDINGVG-VEATVSPMDFTH-QVGFGIDGDVNDGD 120
           EN LLSEWNFG N++ GMSEIEKLVNDI GVG  E   S MD +H Q  FGI  D N G 
Sbjct: 259 ENNLLSEWNFGGNDDCGMSEIEKLVNDIGGVGHAELNASSMDLSHAQADFGI--DCNVGG 318

Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGNENKNN------ 180
           PMGSL++D          G+D+NDD EM+L GLFE+ I+ +   N NGN+  N       
Sbjct: 319 PMGSLFTD----------GVDVNDDGEMMLSGLFENEITENENVNQNGNDQNNEEEDEEV 378

Query: 181 EGKDVKDDLLSKEWQNNFT 187
           E +D +DD+LSKEW NNF+
Sbjct: 379 EDEDDEDDILSKEWSNNFS 385

[Close]

BLAST of Bhi11M002034 vs. ExPASy TrEMBL
Match: A0A6J1L3D4 (uncharacterized protein LOC111498747 OS=Cucurbita maxima OX=3661 GN=LOC111498747 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.3e-28
Identity = 97/196 (49.49%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
           MVMN NDKIGGSSSSM GELG  QSE N+     GGNSM+ + +LGG  TI  EGD DEN
Sbjct: 199 MVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEVVDLGGRTTITAEGDMDEN 258

Query: 61  ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTH-QVGFGIDGDVNDGDPMG 120
            LL +WNFG     GMSEIEKLV+++   GV+   SPMD  + Q  +G+ GD        
Sbjct: 259 NLLCDWNFG-GTGCGMSEIEKLVSNLG--GVDDNASPMDLANPQANYGMIGD-------- 318

Query: 121 SLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNEN-----KNNEGKDV-- 180
                    GDG SV      +AEM+L GLF SG    + NG EN     K NE ++   
Sbjct: 319 --------GGDGASV------EAEMMLHGLFGSGSRSRSSNGTENETLIEKVNEEEEEEA 363

Query: 181 -KDDLLSKEWQNNFTP 188
            +DDLL+KEW NNFTP
Sbjct: 379 DEDDLLNKEWPNNFTP 363

[Close]

BLAST of Bhi11M002034 vs. ExPASy TrEMBL
Match: A0A6J1F887 (MADS-box transcription factor PHERES 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443217 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.2e-28
Identity = 95/196 (48.47%), Postives = 114/196 (58.16%), Query Frame = 0


Query: 1   MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
           MVMN NDKIGGSSSSM GELG  QSE N+     GGNSM+   +LGG  TI  EGD DEN
Sbjct: 199 MVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEAVDLGGRTTITAEGDMDEN 258

Query: 61  ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTH-QVGFGIDGDVNDGDPMG 120
            LL +WNFG     GMSEIEKLV+++   GV+   SPMD  + Q  +G+ GD        
Sbjct: 259 NLLCDWNFG-GTGCGMSEIEKLVSNLG--GVDDNASPMDLANPQANYGMIGD-------- 318

Query: 121 SLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNE--------NKNNEGKD 180
                    GDG SV      +AEM+L GLF SG    + NG E        N+  E ++
Sbjct: 319 --------GGDGASV------EAEMMLHGLFGSGSRSRSSNGTENETLIEKVNEEEEEEE 363

Query: 181 VKDDLLSKEWQNNFTP 188
            +DDLL+KEW NNFTP
Sbjct: 379 DEDDLLNKEWPNNFTP 363

The following BLAST results are available for this feature:

BLAST of Bhi11M002034 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M002034 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M002034 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904450.1	7.3e-55	89.84	MADS-box transcription factor PHERES 1-like [Benincasa hispida]	[more]
KAA0043801.1	1.1e-47	61.50	MADS-box transcription factor 50-like [Cucumis melo var. makuwa] >TYK25332.1 MAD...	[more]
XP_008442937.1	1.1e-47	61.50	PREDICTED: uncharacterized protein LOC103486691 [Cucumis melo]	[more]
XP_004136717.1	5.8e-44	58.29	uncharacterized protein LOC101219702 [Cucumis sativus] >KGN59225.1 hypothetical ...	[more]
XP_023539789.1	2.0e-28	48.98	uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi11M002034 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQH1	5.5e-48	61.50	MADS-box transcription factor 50-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B6W2	5.5e-48	61.50	uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=...	[more]
A0A0A0LB39	2.8e-44	58.29	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE...	[more]
A0A6J1L3D4	6.3e-28	49.49	uncharacterized protein LOC111498747 OS=Cucurbita maxima OX=3661 GN=LOC111498747...	[more]
A0A6J1F887	8.2e-28	48.47	MADS-box transcription factor PHERES 1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..187

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi11G002034	Bhi11G002034	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M002034.exon1	Bhi11M002034.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi11M002034	cds.Bhi11M002034	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi11M002034	Bhi11M002034-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding