Bhi11M000451 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi11M000451
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr11: 13417054 .. 13417673 (-)
Sequence length	620
RNA-Seq Expression	Bhi11M000451
Synteny	Bhi11M000451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCCTTCAACTTTCATTCTTAACCCATCTCAAACTCTCACAGGAAGATGAAGATGATGAAGATGAGGATGATGGGTACTCGTATCACTCGTAGAAGCAATATTATGTCCATGCCAAATCCATTCCATGCCATCGCTTGTACCTCTCTGGCTGATCATTGCACTTCTCCTTTTCATCGGCGCTATGGCAAAGCAAGTAAAGAGGGCGAGGACGACGGCAGCGAGCGATCGAAGACTGACCGAGCCCCGTCGACCGCGGAGGAGTTCGATAGAGTGGCGGCTGAAAAGCAGCCGAAGGAGGTGCACGATCAGGGCGTCACCAAAGAATCTGAAGCCATAGAAAAAAATGGCCCTAATGACGGCATAAACAAAGGGCCTAATTACCGGCCTTGTAGCTGATGGATCCGACTCAAATATGAATCATCCCATGGACTTTCCCAAAACTACTAAACTTTTTCCCTTTTTTGTTTTTTATTATTATTATCAAATATGTTATGTTGGTTGTGTTATGCTTATTTTGATATGGGTATTTAAAAGGTTAAAAACATATAATTTGGGTGTAATTTTGATCTGTTTCATTGATGTATAGAAAATTCAATGCAGTGTGTTCTCAACAA

mRNA sequence

ATGATCCCCTTCAACTTTCATTCTTAACCCATCTCAAACTCTCACAGGAAGATGAAGATGATGAAGATGAGGATGATGGGTACTCGTATCACTCGTAGAAGCAATATTATGTCCATGCCAAATCCATTCCATGCCATCGCTTGTACCTCTCTGGCTGATCATTGCACTTCTCCTTTTCATCGGCGCTATGGCAAAGCAAGTAAAGAGGGCGAGGACGACGGCAGCGAGCGATCGAAGACTGACCGAGCCCCGTCGACCGCGGAGGAGTTCGATAGAGTGGCGGCTGAAAAGCAGCCGAAGGAGGTGCACGATCAGGGCGTCACCAAAGAATCTGAAGCCATAGAAAAAAATGGCCCTAATGACGGCATAAACAAAGGGCCTAATTACCGGCCTTGTAGCTGATGGATCCGACTCAAATATGAATCATCCCATGGACTTTCCCAAAACTACTAAACTTTTTCCCTTTTTTGTTTTTTATTATTATTATCAAATATGTTATGTTGGTTGTGTTATGCTTATTTTGATATGGGTATTTAAAAGGTTAAAAACATATAATTTGGGTGTAATTTTGATCTGTTTCATTGATGTATAGAAAATTCAATGCAGTGTGTTCTCAACAA

Coding sequence (CDS)

ATGAAGATGATGAAGATGAGGATGATGGGTACTCGTATCACTCGTAGAAGCAATATTATGTCCATGCCAAATCCATTCCATGCCATCGCTTGTACCTCTCTGGCTGATCATTGCACTTCTCCTTTTCATCGGCGCTATGGCAAAGCAAGTAAAGAGGGCGAGGACGACGGCAGCGAGCGATCGAAGACTGACCGAGCCCCGTCGACCGCGGAGGAGTTCGATAGAGTGGCGGCTGAAAAGCAGCCGAAGGAGGTGCACGATCAGGGCGTCACCAAAGAATCTGAAGCCATAGAAAAAAATGGCCCTAATGACGGCATAAACAAAGGGCCTAATTACCGGCCTTGTAGCTGA

Protein sequence

MKMMKMRMMGTRITRRSNIMSMPNPFHAIACTSLADHCTSPFHRRYGKASKEGEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQGVTKESEAIEKNGPNDGINKGPNYRPCS

Homology

[Close]

BLAST of Bhi11M000451 vs. NCBI nr
Match: KGN56105.1 (hypothetical protein Csa_009481 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12
Identity = 64/135 (47.41%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 1   MKMMKMRMMGTRITRRSNI-MSMPNPFHAIA-----CTSLADHC-TSPFHRRYGKASK-E 60
           +KM K+ +  T     +N  M M NPF  +A       S+AD+   S F RRYGK SK E
Sbjct: 44  IKMKKIGIFPTACRSNNNTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDE 103

Query: 61  GEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQGV---------TKESEAI--EKNG 117
            E  G ERSK +RAPSTAEEF+R+A EKQ K+  ++ V          KESEA   + + 
Sbjct: 104 AEHSGGERSKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHD 163

[Close]

BLAST of Bhi11M000451 vs. NCBI nr
Match: KAA0055854.1 (uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa] >TYK24078.1 uncharacterized protein E5676_scaffold943G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-10
Identity = 61/129 (47.29%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 6   MRMMGTRI-TRRSNI-MSMPNPFHAIACTSLADHC------TSPFHRR--YGK--ASKEG 65
           M+ +G  I TRRSN  M+M NP   +   S +          S F RR  YGK  +  E 
Sbjct: 1   MKKIGIPIPTRRSNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRSCYGKPISKDEA 60

Query: 66  EDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQ-----GVTKESEAIEKNG-PNDGIN 117
           E  G ERSK +RAPSTAEEF+R+A EK+ K+  ++      VTKES  +EK+  PN+ IN
Sbjct: 61  ERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMEKSSDPNNHIN 120

[Close]

BLAST of Bhi11M000451 vs. NCBI nr
Match: XP_016900655.1 (PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-10
Identity = 61/130 (46.92%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 4   MKMRMMGTRI-TRRSNI-MSMPNPFHAIACTSLADHC------TSPFHRR-YGK--ASKE 63
           +KM+ +G  I TRRSN  M+M NP   +   S +          S F RR YGK  +  E
Sbjct: 25  VKMKKIGIPIPTRRSNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRCYGKPISKDE 84

Query: 64  GEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQ-----GVTKESEAIEKNG-PNDGI 117
            E  G ERSK +RAPSTAEEF+R+A EK+ K+  ++      VTKES  + K+  PN+ I
Sbjct: 85  AERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDPNNHI 144

[Close]

BLAST of Bhi11M000451 vs. NCBI nr
Match: XP_016900656.1 (PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 8.4e-09
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 39  TSPFHRR-YGK--ASKEGEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQ-----GV 98
           TS F RR YGK  +  E E  G ERSK +RAPSTAEEF+R+A EK+ K+  ++      V
Sbjct: 39  TSLFPRRCYGKPISKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKV 98

Query: 99  TKESEAIEKNG-PNDGINKGPNYRPCS 117
           TKES  + K+  PN+ INKGPNYRPCS
Sbjct: 99  TKESGEMGKSSDPNNHINKGPNYRPCS 125

[Close]

BLAST of Bhi11M000451 vs. NCBI nr
Match: KAG6596946.1 (hypothetical protein SDJN03_10126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.6 bits (166), Expect = 4.2e-08
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 6   MRMMGTRITRRSNIMSMPNPFH-AIACTSLADHCTSPFHRRYGKA-------SKEGEDDG 65
           M M+G+R  R   I+   NP H  +AC+++  H  S   RRY K         +  E   
Sbjct: 1   MTMIGSRTCR---IIFNLNPIHPLLACSTVKGHWPSLLARRYDKPRTDEKDHHRSAEKGT 60

Query: 66  SERSKTDRAPSTAEEFDRVAAEKQPKEVHDQGVTKESEAIEKNGPNDGINKGPNYRPCS 117
             RS TDRAPS AEEF+R+A EK  KE   +   K+SE  +K   +  ++ GPNYRPCS
Sbjct: 61  DHRSNTDRAPSMAEEFNRIADEKHLKEAPGRSSDKQSETSQKTASDQNLDDGPNYRPCS 116

[Close]

BLAST of Bhi11M000451 vs. ExPASy TrEMBL
Match: A0A0A0L2C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073950 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.9e-13
Identity = 64/135 (47.41%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 1   MKMMKMRMMGTRITRRSNI-MSMPNPFHAIA-----CTSLADHC-TSPFHRRYGKASK-E 60
           +KM K+ +  T     +N  M M NPF  +A       S+AD+   S F RRYGK SK E
Sbjct: 44  IKMKKIGIFPTACRSNNNTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDE 103

Query: 61  GEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQGV---------TKESEAI--EKNG 117
            E  G ERSK +RAPSTAEEF+R+A EKQ K+  ++ V          KESEA   + + 
Sbjct: 104 AEHSGGERSKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHD 163

[Close]

BLAST of Bhi11M000451 vs. ExPASy TrEMBL
Match: A0A5A7UKZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00480 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.7e-11
Identity = 61/129 (47.29%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 6   MRMMGTRI-TRRSNI-MSMPNPFHAIACTSLADHC------TSPFHRR--YGK--ASKEG 65
           M+ +G  I TRRSN  M+M NP   +   S +          S F RR  YGK  +  E 
Sbjct: 1   MKKIGIPIPTRRSNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRSCYGKPISKDEA 60

Query: 66  EDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQ-----GVTKESEAIEKNG-PNDGIN 117
           E  G ERSK +RAPSTAEEF+R+A EK+ K+  ++      VTKES  +EK+  PN+ IN
Sbjct: 61  ERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMEKSSDPNNHIN 120

[Close]

BLAST of Bhi11M000451 vs. ExPASy TrEMBL
Match: A0A1S4DY64 (uncharacterized protein LOC107990980 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990980 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.7e-11
Identity = 61/130 (46.92%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 4   MKMRMMGTRI-TRRSNI-MSMPNPFHAIACTSLADHC------TSPFHRR-YGK--ASKE 63
           +KM+ +G  I TRRSN  M+M NP   +   S +          S F RR YGK  +  E
Sbjct: 25  VKMKKIGIPIPTRRSNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRCYGKPISKDE 84

Query: 64  GEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQ-----GVTKESEAIEKNG-PNDGI 117
            E  G ERSK +RAPSTAEEF+R+A EK+ K+  ++      VTKES  + K+  PN+ I
Sbjct: 85  AERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDPNNHI 144

[Close]

BLAST of Bhi11M000451 vs. ExPASy TrEMBL
Match: A0A1S4DXE7 (uncharacterized protein LOC107990980 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990980 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.1e-09
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 39  TSPFHRR-YGK--ASKEGEDDGSERSKTDRAPSTAEEFDRVAAEKQPKEVHDQ-----GV 98
           TS F RR YGK  +  E E  G ERSK +RAPSTAEEF+R+A EK+ K+  ++      V
Sbjct: 39  TSLFPRRCYGKPISKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKV 98

Query: 99  TKESEAIEKNG-PNDGINKGPNYRPCS 117
           TKES  + K+  PN+ INKGPNYRPCS
Sbjct: 99  TKESGEMGKSSDPNNHINKGPNYRPCS 125

The following BLAST results are available for this feature:

BLAST of Bhi11M000451 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M000451 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M000451 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56105.1	1.6e-12	47.41	hypothetical protein Csa_009481 [Cucumis sativus]	[more]
KAA0055854.1	1.2e-10	47.29	uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_016900655.1	2.0e-10	46.92	PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo]	[more]
XP_016900656.1	8.4e-09	55.17	PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo]	[more]
KAG6596946.1	4.2e-08	40.34	hypothetical protein SDJN03_10126, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Bhi11M000451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2C8	7.9e-13	47.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073950 PE=4 SV=1	[more]
A0A5A7UKZ4	5.7e-11	47.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DY64	9.7e-11	46.92	uncharacterized protein LOC107990980 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DXE7	4.1e-09	55.17	uncharacterized protein LOC107990980 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..99

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi11G000451	Bhi11G000451	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M000451.exon1	Bhi11M000451.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M000451.utr3p1	Bhi11M000451.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi11M000451	cds.Bhi11M000451	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M000451.utr5p1	Bhi11M000451.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi11M000451	Bhi11M000451-protein	polypeptide