Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TACGTGAAAATTTTCAGATTAGTATTTCCTCATATTAGAAACTAAACATTTTGTTCATAACAATTAATTTTACATTATTTCATCTATATTCATGTATTATCGTATAAAAAAACGGAAATGCCTTATATTAAAAGGAAAAAAAAACACCAATATTTGTAATTAAAAAAAATGAAGAGAAATATATGCAAGCATAATAAAGCAATCCCAAAATATCCCCTAAACAAAAAATAAAAAAAGAATCGAAACGAAGATCCACAGAAACGAAAACCTAGAACCGAGGAGGAGGCGCAGCGAAGAAAGGCCTTCCACCGCCACCGCCACCGCCACCGCCGCCGCAGAGACCTCCATCGCAGTAATCGACCTTATCTTTAATCTTATGAAATCCGTCTTTGAAAACTCCGAATCCGAAAAGCAAACCGATGGCGACAACCACCAGAATCAGGCACGTGCAGAGCATGCAGACCTTTCCAAAGCAGCACATCGTCGCTCCGGCGGCCGGATCTTGGAATTGGCGATTGAGAGAGGGATAAGGAAGAAGGAAGATCGGAATGTTTATAGACGGGGAGAGCAGTGGCTTGAAAAGAAGGCAAAAGAGTTTGGGATTTGGTTGGGAAAGTGAGGTTTGTGATTTAATTTATATTTTTTTTAAAAAGAAAAAAGAATAAAGAATAAAAAGGAGTTTTGCTTTTGGAGAACGGCTGAAGAAGAC mRNA sequence TACGTGAAAATTTTCAGATTAGTATTTCCTCATATTAGAAACTAAACATTTTGTTCATAACAATTAATTTTACATTATTTCATCTATATTCATGTATTATCGTATAAAAAAACGGAAATGCCTTATATTAAAAGGAAAAAAAAACACCAATATTTGTAATTAAAAAAAATGAAGAGAAATATATGCAAGCATAATAAAGCAATCCCAAAATATCCCCTAAACAAAAAATAAAAAAAGAATCGAAACGAAGATCCACAGAAACGAAAACCTAGAACCGAGGAGGAGGCGCAGCGAAGAAAGGCCTTCCACCGCCACCGCCACCGCCACCGCCGCCGCAGAGACCTCCATCGCAGTAATCGACCTTATCTTTAATCTTATGAAATCCGTCTTTGAAAACTCCGAATCCGAAAAGCAAACCGATGGCGACAACCACCAGAATCAGGCACGTGCAGAGCATGCAGACCTTTCCAAAGCAGCACATCGTCGCTCCGGCGGCCGGATCTTGGAATTGGCGATTGAGAGAGGGATAAGGAAGAAGGAAGATCGGAATGTTTATAGACGGGGAGAGCAGTGGCTTGAAAAGAAGGCAAAAGAGTTTGGGATTTGGTTGGGAAAGTGAGGTTTGTGATTTAATTTATATTTTTTTTAAAAAGAAAAAAGAATAAAGAATAAAAAGGAGTTTTGCTTTTGGAGAACGGCTGAAGAAGAC Coding sequence (CDS) ATGAAATCCGTCTTTGAAAACTCCGAATCCGAAAAGCAAACCGATGGCGACAACCACCAGAATCAGGCACGTGCAGAGCATGCAGACCTTTCCAAAGCAGCACATCGTCGCTCCGGCGGCCGGATCTTGGAATTGGCGATTGAGAGAGGGATAAGGAAGAAGGAAGATCGGAATGTTTATAGACGGGGAGAGCAGTGGCTTGAAAAGAAGGCAAAAGAGTTTGGGATTTGGTTGGGAAAGTGA Protein sequence MKSVFENSESEKQTDGDNHQNQARAEHADLSKAAHRRSGGRILELAIERGIRKKEDRNVYRRGEQWLEKKAKEFGIWLGK
Homology
BLAST of Bhi11M000343 vs. NCBI nr
Match: KAG6577531.1 (Subtilisin-like protease 5.3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05 Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 0
Query: 1 MKSVFENSESEKQTDGDNHQNQARAEHADLSKAAHRRSGGRIL 44
+KSVFENSESE+++DG +HQNQARA+HA LS+AAHR GRIL
Sbjct: 758 VKSVFENSESEEESDGHDHQNQARAQHAHLSEAAHRGFAGRIL 800
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6577531.1 | 1.0e-05 | 72.09 | Subtilisin-like protease 5.3, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..37 |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Bhi11M000343.utr5p1 | Bhi11M000343.utr5p1 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Bhi11M000343.exon1 | Bhi11M000343.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.Bhi11M000343 | cds.Bhi11M000343 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Bhi11M000343.utr3p1 | Bhi11M000343.utr3p1 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Bhi11M000343 | Bhi11M000343-protein | polypeptide |
|
