Bhi07M000231 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi07M000231
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Cytochrome b561 domain-containing protein
Location	chr7: 12633880 .. 12634095 (+)
Sequence length	216
RNA-Seq Expression	Bhi07M000231
Synteny	Bhi07M000231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGAAACGAGGTAAGATAATGGCAAGGCCAGTGACTTTGTTGGGTCATTTGGTAGCCGTGGCAGTTGCAGCTCTTATTCTTGTTTGGATCCTCCATTTTGGAGGAGGGGCTGCTATCAAATCAGATAACAAGCTCAAGATTCTAAATGTGAGTGTGTCTTCTCCAATACGTCCTATCGAAATGGCGACTCTTTCGATTCACCATTTTTGA

mRNA sequence

ATGGCGTCGAAACGAGGTAAGATAATGGCAAGGCCAGTGACTTTGTTGGGTCATTTGGTAGCCGTGGCAGTTGCAGCTCTTATTCTTGTTTGGATCCTCCATTTTGGAGGAGGGGCTGCTATCAAATCAGATAACAAGCTCAAGATTCTAAATGTGAGTGTGTCTTCTCCAATACGTCCTATCGAAATGGCGACTCTTTCGATTCACCATTTTTGA

Coding sequence (CDS)

ATGGCGTCGAAACGAGGTAAGATAATGGCAAGGCCAGTGACTTTGTTGGGTCATTTGGTAGCCGTGGCAGTTGCAGCTCTTATTCTTGTTTGGATCCTCCATTTTGGAGGAGGGGCTGCTATCAAATCAGATAACAAGCTCAAGATTCTAAATGTGAGTGTGTCTTCTCCAATACGTCCTATCGAAATGGCGACTCTTTCGATTCACCATTTTTGA

Protein sequence

MASKRGKIMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNVSVSSPIRPIEMATLSIHHF

Homology

[Close]

BLAST of Bhi07M000231 vs. ExPASy Swiss-Prot
Match: Q6I681 (Ascorbate-specific transmembrane electron transporter 1 OS=Zea mays OX=4577 GN=ZCYB PE=1 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.8e-04
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 8  IMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNV 53
          + A P T   H +AVA AA++LVW + F GG AI+S NK  I NV
Sbjct: 7  VRAAPFTYAAHALAVAAAAMVLVWSIQFRGGLAIESTNKNLIFNV 51

[Close]

BLAST of Bhi07M000231 vs. ExPASy Swiss-Prot
Match: A3A9H6 (Probable ascorbate-specific transmembrane electron transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0642300 PE=3 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.8e-04
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 8  IMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNV 53
          + A P T + H +AVA A ++LVW +HF GG A ++ NK  I NV
Sbjct: 5  VRAAPFTYVAHALAVAAATMVLVWCIHFRGGLAFEATNKNLIFNV 49

[Close]

BLAST of Bhi07M000231 vs. ExPASy Swiss-Prot
Match: C4IYS8 (Ascorbate-specific transmembrane electron transporter 2 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.8e-04
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 8  IMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNV 53
          + A P T   H +AVA AA++LVW ++F GG AI++ NK  I NV
Sbjct: 7  VRAAPFTYAAHALAVAAAAMVLVWAIYFRGGLAIEATNKNLIFNV 51

[Close]

BLAST of Bhi07M000231 vs. ExPASy TrEMBL
Match: A0A0A0KJD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G059140 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 1  MASKRGKIMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNVSVS 56
          MA    KIMARPVTLLGHLVA+A+A LILVWI HF GG AIKSDNKLKILNVS+S
Sbjct: 1  MAKGNLKIMARPVTLLGHLVAIAIATLILVWIFHFSGGVAIKSDNKLKILNVSLS 55

[Close]

BLAST of Bhi07M000231 vs. ExPASy TrEMBL
Match: A0A6J1DA84 (probable ascorbate-specific transmembrane electron transporter 1 OS=Momordica charantia OX=3673 GN=LOC111018308 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.9e-11
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 1  MASKRGK--IMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNVSV 55
          MASKRGK  I+ARPVT+LGH+VA+AVAALIL WILHF  G A+KS NKLKILN+ V
Sbjct: 1  MASKRGKFQILARPVTILGHVVAMAVAALILAWILHFREGVALKSANKLKILNLHV 56

[Close]

BLAST of Bhi07M000231 vs. ExPASy TrEMBL
Match: A0A6J1JK51 (probable ascorbate-specific transmembrane electron transporter 1 OS=Cucurbita maxima OX=3661 GN=LOC111485304 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1  MASKRG-KIMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNVSV 55
          MA KR   IMARPVTLLGHLVA+++A LILVWILHF  G A KSDNKLKILN+ V
Sbjct: 1  MAFKRNFNIMARPVTLLGHLVAISIAVLILVWILHFREGVAFKSDNKLKILNLHV 55

[Close]

BLAST of Bhi07M000231 vs. ExPASy TrEMBL
Match: A0A6J1FVA1 (probable ascorbate-specific transmembrane electron transporter 1 OS=Cucurbita moschata OX=3662 GN=LOC111447173 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1  MASKRG-KIMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNVSV 55
          MA KR   IMARPVTLLGHLVA+++A LILVWILHF  G A KSDNKLKILN+ V
Sbjct: 1  MAFKRNFNIMARPVTLLGHLVAISIAVLILVWILHFREGVAFKSDNKLKILNLHV 55

[Close]

BLAST of Bhi07M000231 vs. ExPASy TrEMBL
Match: A0A2R6P3M9 (Ascorbate-specific transmembrane electron transporter OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc32867 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 1  MASKRG---KIMARPVTLLGHLVAVAVAALILVWILHFGGGAAIKSDNKLKILNV 53
          MASK G   ++ A PVT+  HLVA+AV  L+LVW+LHF GG A KSD K KI N+
Sbjct: 1  MASKNGSSFRVSALPVTVFAHLVAIAVITLVLVWLLHFQGGLAFKSDIKTKIFNI 55

The following BLAST results are available for this feature:

BLAST of Bhi07M000231 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07M000231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6I681	8.8e-04	51.11	Ascorbate-specific transmembrane electron transporter 1 OS=Zea mays OX=4577 GN=Z...	[more]
A3A9H6	8.8e-04	46.67	Probable ascorbate-specific transmembrane electron transporter 1 OS=Oryza sativa...	[more]
C4IYS8	8.8e-04	48.89	Ascorbate-specific transmembrane electron transporter 2 OS=Zea mays OX=4577 PE=2...	[more]

BLAST of Bhi07M000231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJD9	2.2e-13	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G059140 PE=4 SV=1	[more]
A0A6J1DA84	5.9e-11	75.00	probable ascorbate-specific transmembrane electron transporter 1 OS=Momordica ch...	[more]
A0A6J1JK51	1.7e-10	74.55	probable ascorbate-specific transmembrane electron transporter 1 OS=Cucurbita ma...	[more]
A0A6J1FVA1	1.7e-10	74.55	probable ascorbate-specific transmembrane electron transporter 1 OS=Cucurbita mo...	[more]
A0A2R6P3M9	2.6e-06	58.18	Ascorbate-specific transmembrane electron transporter OS=Actinidia chinensis var...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.120.1770		coord: 5..65 e-value: 5.0E-7 score: 31.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi07G000231	Bhi07G000231	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M000231.exon1	Bhi07M000231.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi07M000231	cds.Bhi07M000231	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi07M000231	Bhi07M000231-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity