Bhi07M000169 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi07M000169
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase
Location	chr7: 9823107 .. 9824391 (+)
Sequence length	1285
RNA-Seq Expression	Bhi07M000169
Synteny	Bhi07M000169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAACCCTCCTGGTTTCTGCTTTCGTTTATTGAGTTCAATTTTTGGTTTATTGAGTTCAATTTTTGCTACGGTTCCGAACCTAACCAGTCGACCGTTACACCGAACCTAACGCTAAGGCTATCCCCTCCCAACCCTACTCTTCAAATTCTCTTCCTCCAACTTCCACCTTCCTTCAACGTTCAACCATGGTCTCCAACTCCAAGATCATCAAAAGATCCCCCACCAAGCCCTTCCGCCGCCACCGCCGCAAGTCTCCGATCAAGAATGCCTCCTCCGCTGTCGTCGCCACCATCCACCGTTCTCTCTACACCTGCCACCGCCGTCTTCTCAAAATCTTCTCCAAGTTAGCCCGTATCAGCACCCCCAACCGCCACAAAGGCTACAAATCCTTGAGGAAAACCGCCTCCACCTCCTCTGAACCCGACATTGTCCGAACCCTAGTCTTCGACAACGGCCTCCTCCCTCCTCTCATTTCGCCGGCCAAGCGGACCGTTCTCCTCGACCTCGATGAGACTCTGGTCCATTCCAAACTCGATCCACCGCCAGAGAAGTTCGATTTCGTAGTCAGGCCGAAGATCGACGGCGAAATACTCAATTTCTATGTGCTCAAACGCCCTGGCGTGGACCAATTTCTGGAAGCCCTAGCGGATAAATTCGAAATCGTGGTGTTCACAGCGGGGTTGAAGGAATACGCGTCGCTCGTGCTGAACCATTTAGACAAGAAATCGGTGATCTCGCACAGGTTGTATCGCGATTCTTGCAAGGAGGTGGAAGGGAAATACGTGAAGGATTTGTCTGAAATTGGGAGGGATTTAAGAAGAGTAGTGATTGTGGATGATAATCCGAATGCTTACGTTTTTCAACCGGAAAATGCGATTCCGATTCCGTCGTTCATCGACGATCCGACGGACATGGAGCTTCGGAAATTGGTAAAGTTTTTTGAGGTATGTGAATGTTATGATGATATGAGGGATGCTGTGAAGCAATATCTGAGTAGAGAAGAAACTTGAAATTACTGAAGTTTGTTTGTTGATTGAAATGATATGATTACTAAAAATGTAGTTGAACAGTGAATGTTCAATTTCAAATGAAAAAGGAACATCTTCCTCTTTATGTAATCCAAATTCAATCCATAATACATAGATTTTGCAGAAGAGATGTTGTTTCGGCTTTCTTCATCGTTATGAGTCTAATCATTGATTTGATCAACACTTTGTGGTATTGTTTCAGCTGGGGGGAATAATAATATTTTTAGCAAATAACGTATAGATCATGTGCGGGA

mRNA sequence

GTAAAACCCTCCTGGTTTCTGCTTTCGTTTATTGAGTTCAATTTTTGGTTTATTGAGTTCAATTTTTGCTACGGTTCCGAACCTAACCAGTCGACCGTTACACCGAACCTAACGCTAAGGCTATCCCCTCCCAACCCTACTCTTCAAATTCTCTTCCTCCAACTTCCACCTTCCTTCAACGTTCAACCATGGTCTCCAACTCCAAGATCATCAAAAGATCCCCCACCAAGCCCTTCCGCCGCCACCGCCGCAAGTCTCCGATCAAGAATGCCTCCTCCGCTGTCGTCGCCACCATCCACCGTTCTCTCTACACCTGCCACCGCCGTCTTCTCAAAATCTTCTCCAAGTTAGCCCGTATCAGCACCCCCAACCGCCACAAAGGCTACAAATCCTTGAGGAAAACCGCCTCCACCTCCTCTGAACCCGACATTGTCCGAACCCTAGTCTTCGACAACGGCCTCCTCCCTCCTCTCATTTCGCCGGCCAAGCGGACCGTTCTCCTCGACCTCGATGAGACTCTGGTCCATTCCAAACTCGATCCACCGCCAGAGAAGTTCGATTTCGTAGTCAGGCCGAAGATCGACGGCGAAATACTCAATTTCTATGTGCTCAAACGCCCTGGCGTGGACCAATTTCTGGAAGCCCTAGCGGATAAATTCGAAATCGTGGTGTTCACAGCGGGGTTGAAGGAATACGCGTCGCTCGTGCTGAACCATTTAGACAAGAAATCGGTGATCTCGCACAGGTTGTATCGCGATTCTTGCAAGGAGGTGGAAGGGAAATACGTGAAGGATTTGTCTGAAATTGGGAGGGATTTAAGAAGAGTAGTGATTGTGGATGATAATCCGAATGCTTACGTTTTTCAACCGGAAAATGCGATTCCGATTCCGTCGTTCATCGACGATCCGACGGACATGGAGCTTCGGAAATTGGTAAAGTTTTTTGAGGTATGTGAATGTTATGATGATATGAGGGATGCTGTGAAGCAATATCTGAGTAGAGAAGAAACTTGAAATTACTGAAGTTTGTTTGTTGATTGAAATGATATGATTACTAAAAATGTAGTTGAACAGTGAATGTTCAATTTCAAATGAAAAAGGAACATCTTCCTCTTTATGTAATCCAAATTCAATCCATAATACATAGATTTTGCAGAAGAGATGTTGTTTCGGCTTTCTTCATCGTTATGAGTCTAATCATTGATTTGATCAACACTTTGTGGTATTGTTTCAGCTGGGGGGAATAATAATATTTTTAGCAAATAACGTATAGATCATGTGCGGGA

Coding sequence (CDS)

ATGGTCTCCAACTCCAAGATCATCAAAAGATCCCCCACCAAGCCCTTCCGCCGCCACCGCCGCAAGTCTCCGATCAAGAATGCCTCCTCCGCTGTCGTCGCCACCATCCACCGTTCTCTCTACACCTGCCACCGCCGTCTTCTCAAAATCTTCTCCAAGTTAGCCCGTATCAGCACCCCCAACCGCCACAAAGGCTACAAATCCTTGAGGAAAACCGCCTCCACCTCCTCTGAACCCGACATTGTCCGAACCCTAGTCTTCGACAACGGCCTCCTCCCTCCTCTCATTTCGCCGGCCAAGCGGACCGTTCTCCTCGACCTCGATGAGACTCTGGTCCATTCCAAACTCGATCCACCGCCAGAGAAGTTCGATTTCGTAGTCAGGCCGAAGATCGACGGCGAAATACTCAATTTCTATGTGCTCAAACGCCCTGGCGTGGACCAATTTCTGGAAGCCCTAGCGGATAAATTCGAAATCGTGGTGTTCACAGCGGGGTTGAAGGAATACGCGTCGCTCGTGCTGAACCATTTAGACAAGAAATCGGTGATCTCGCACAGGTTGTATCGCGATTCTTGCAAGGAGGTGGAAGGGAAATACGTGAAGGATTTGTCTGAAATTGGGAGGGATTTAAGAAGAGTAGTGATTGTGGATGATAATCCGAATGCTTACGTTTTTCAACCGGAAAATGCGATTCCGATTCCGTCGTTCATCGACGATCCGACGGACATGGAGCTTCGGAAATTGGTAAAGTTTTTTGAGGTATGTGAATGTTATGATGATATGAGGGATGCTGTGAAGCAATATCTGAGTAGAGAAGAAACTTGA

Protein sequence

MVSNSKIIKRSPTKPFRRHRRKSPIKNASSAVVATIHRSLYTCHRRLLKIFSKLARISTPNRHKGYKSLRKTASTSSEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMRDAVKQYLSREET

Homology

[Close]

BLAST of Bhi07M000169 vs. TAIR 10
Match: AT5G45700.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 3.9e-63
Identity = 134/282 (47.52%), Postives = 187/282 (66.31%), Query Frame = 0


Query: 5   SKIIKRSPTKPFRRHR-------RKSPI----KNASSAVVATIHRSLYTCHRRLLKIFSK 64
           +K+I +  TK   RH+       RKS I      A++ V+ATI++S+Y CHR  L +FS+
Sbjct: 3   TKLILKKTTKSISRHQRNYLRRHRKSQIGCSPSPATTTVIATINKSIYRCHRTFLCLFSR 62

Query: 65  LARISTPNRHKGYKSLRKTASTSSEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVH 124
            A        KG+K L+      + P    +L  +           K+T++LDLDETLVH
Sbjct: 63  HAT-------KGFKILKPREDFQNSP---YSLFHERS--GKSFDETKKTIVLDLDETLVH 122

Query: 125 SKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLV 184
           S ++ P   +DFVV PKIDG+IL F+V+KRPGVD+FL+ + +K++IVVFTAGL+EYASLV
Sbjct: 123 SSMEKPEVPYDFVVNPKIDGQILTFFVIKRPGVDEFLKKIGEKYQIVVFTAGLREYASLV 182

Query: 185 LNHLD-KKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIP 244
           L+ LD ++ VIS   YRD+C E++G+ VKDL  + RDLRRVVIVDDNPN+Y  QPENA P
Sbjct: 183 LDKLDPERRVISRSFYRDACSEIDGRLVKDLGFVMRDLRRVVIVDDNPNSYALQPENAFP 242

Query: 245 IPSFIDDPTDMELRKLVKF-FEVCECYDDMRDAVKQYLSREE 274
           I  F DD  D+EL+KL +F +  C  ++DMR A+K+++ R+E
Sbjct: 243 IKPFSDDLEDVELKKLGEFLYGDCVKFEDMRVALKEFVGRDE 272

[Close]

BLAST of Bhi07M000169 vs. TAIR 10
Match: AT1G29770.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 6.7e-55
Identity = 115/254 (45.28%), Postives = 159/254 (62.60%), Query Frame = 0


Query: 28  ASSAVVATIHRSLYTCHRRLLKIFSKLARIST---------PNRHKGYKSLRKTASTSSE 87
           A+ ++  +++ S++T H RLL+  S+  R++T         P   +GYK L K      E
Sbjct: 39  AAGSIFTSLNMSIFTFHNRLLRCVSRFLRLATTSSATPTRRPTMKQGYKKLHK-----RE 98

Query: 88  PDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPE-KFDFVVRPKIDGEILN 147
           P I R             +  KRT+ LDLDETLVHS ++PP     DF+VR KI+G ++ 
Sbjct: 99  PLIRR-------------NDKKRTIFLDLDETLVHSTMEPPIRVNVDFMVRIKIEGAVIP 158

Query: 148 FYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEG 207
            +V+KRPGV +FLE ++  + + +FTAGL EYAS VL+ LDK  VIS RLYRDSC EV G
Sbjct: 159 MFVVKRPGVTEFLERISKNYRVAIFTAGLPEYASQVLDKLDKNRVISQRLYRDSCTEVNG 218

Query: 208 KYVKDLSEIGR-DLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPTDMELRKLVKFFEVCE 267
           +Y KDLS + + DL  V++VDDNP +Y  QP+N +PI  F+DD  D EL KL +FF+ C 
Sbjct: 219 RYAKDLSLVAKNDLGSVLLVDDNPFSYSLQPDNGVPIKPFMDDMEDQELMKLAEFFDGCY 274

Query: 268 CYDDMRDAVKQYLS 271
            Y+D+RDA  + LS
Sbjct: 279 QYEDLRDAAAELLS 274

[Close]

BLAST of Bhi07M000169 vs. TAIR 10
Match: AT1G29780.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-53
Identity = 102/172 (59.30%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 100 KRTVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEI 159
           KRT++LDLDETLVH+    P  K DF+V  K++ EI+  +V+KRPGV +FLE L + +++
Sbjct: 49  KRTIILDLDETLVHATTHLPGVKHDFMVMVKMEREIMPIFVVKRPGVTEFLERLGENYKV 108

Query: 160 VVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDLS-EIGRDLRRVVIVDD 219
           VVFTAGL+EYAS VL+ LDK  VIS RLYRDSC EV GKYVKDLS  +G+DLR  +IVDD
Sbjct: 109 VVFTAGLEEYASQVLDKLDKNGVISQRLYRDSCTEVNGKYVKDLSLVVGKDLRSALIVDD 168

Query: 220 NPNAYVFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMRDAVKQYLS 271
           NP++Y  QPEN +PI +F+DD  D EL  LV+F E C  Y+DMRDAV   L+
Sbjct: 169 NPSSYSLQPENGVPIKAFVDDLKDQELLNLVEFLESCYAYEDMRDAVTDLLA 220

[Close]

BLAST of Bhi07M000169 vs. TAIR 10
Match: AT5G11860.1 (SCP1-like small phosphatase 5 )

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-34
Identity = 79/174 (45.40%), Postives = 113/174 (64.94%), Query Frame = 0


Query: 102 TVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVV 161
           +++LDLDETLVHS L+P  E  DF      + E    YV  RP + +F+E ++  FEI++
Sbjct: 113 SLVLDLDETLVHSTLEPCGE-VDFTFPVNFNEEEHMVYVRCRPHLKEFMERVSRLFEIII 172

Query: 162 FTAGLKEYASLVLNHLD-KKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNP 221
           FTA    YA  +LN LD K+ +  HR+YRDSC   +G Y+KDLS +GRDL RV+IVD++P
Sbjct: 173 FTASQSIYAEQLLNVLDPKRKLFRHRVYRDSCVFFDGNYLKDLSVLGRDLSRVIIVDNSP 232

Query: 222 NAYVFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMRDAV-KQYLSREE 274
            A+ FQ EN +PI S+ +DP+D EL  L+ F E     +D+R  + K++  RE+
Sbjct: 233 QAFGFQVENGVPIESWFNDPSDKELLHLLPFLESLIGVEDVRPMIAKKFNLREK 285

[Close]

BLAST of Bhi07M000169 vs. TAIR 10
Match: AT5G11860.2 (SCP1-like small phosphatase 5 )

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-34
Identity = 79/174 (45.40%), Postives = 113/174 (64.94%), Query Frame = 0


Query: 102 TVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVV 161
           +++LDLDETLVHS L+P  E  DF      + E    YV  RP + +F+E ++  FEI++
Sbjct: 113 SLVLDLDETLVHSTLEPCGE-VDFTFPVNFNEEEHMVYVRCRPHLKEFMERVSRLFEIII 172

Query: 162 FTAGLKEYASLVLNHLD-KKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNP 221
           FTA    YA  +LN LD K+ +  HR+YRDSC   +G Y+KDLS +GRDL RV+IVD++P
Sbjct: 173 FTASQSIYAEQLLNVLDPKRKLFRHRVYRDSCVFFDGNYLKDLSVLGRDLSRVIIVDNSP 232

Query: 222 NAYVFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMRDAV-KQYLSREE 274
            A+ FQ EN +PI S+ +DP+D EL  L+ F E     +D+R  + K++  RE+
Sbjct: 233 QAFGFQVENGVPIESWFNDPSDKELLHLLPFLESLIGVEDVRPMIAKKFNLREK 285

[Close]

BLAST of Bhi07M000169 vs. ExPASy Swiss-Prot
Match: Q9XYL0 (Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum OX=44689 GN=fcpA PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.9e-40
Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 89  NGLLPPLISPAKR-----TVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKR 148
           NG +P ++    R     T++LDLDETLVHS   P     DF+V  +I+G I   YV+KR
Sbjct: 120 NGEIPLMVPMIPRHVGLKTLVLDLDETLVHSSFKPVHNP-DFIVPVEIEGTIHQVYVVKR 179

Query: 149 PGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDL 208
           P VD FL A+A+KFEIVVFTA L +YA  VL+ LD   VI +RL+R+SC   +G YVKDL
Sbjct: 180 PFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGRVIHYRLFRESCHNHKGNYVKDL 239

Query: 209 SEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMR 263
           S +GRDL+  +IVD++P++Y+F PENAIPI S+ DD  D EL  L+   +     +D+R
Sbjct: 240 SRLGRDLKSTIIVDNSPSSYLFHPENAIPIDSWFDDKDDRELLDLLPLLDDLIKVEDVR 297

[Close]

BLAST of Bhi07M000169 vs. ExPASy Swiss-Prot
Match: P58465 (CTD small phosphatase-like protein OS=Mus musculus OX=10090 GN=Ctdspl PE=2 SV=3)

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39
Identity = 94/228 (41.23%), Postives = 131/228 (57.46%), Query Frame = 0


Query: 66  YKSLRKTASTSSEPDIVRTLVFDNGLLP--------PLISP--------------AKRTV 125
           ++     A  ++ P ++  LV +NG L         P+ SP               K+ V
Sbjct: 50  FRDYNVEAPPANSPSVLPPLVEENGGLQKGDQRQVIPVPSPPAKYLLPEVTVLDYGKKCV 109

Query: 126 LLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFT 185
           ++DLDETLVHS    P    DF+V  +IDG I   YVLKRP VD+FL+ +   FE V+FT
Sbjct: 110 VIDLDETLVHSSF-KPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 169

Query: 186 AGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAY 245
           A L +YA  V + LD+  V   RL+R+SC    G YVKDLS +GR+L +V+IVD++P +Y
Sbjct: 170 ASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASY 229

Query: 246 VFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMRDAVKQYLSR 272
           +F PENA+P+ S+ DD TD EL  L+ FFE     DD+   + +  SR
Sbjct: 230 IFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHRLCSR 276

[Close]

BLAST of Bhi07M000169 vs. ExPASy Swiss-Prot
Match: O15194 (CTD small phosphatase-like protein OS=Homo sapiens OX=9606 GN=CTDSPL PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39
Identity = 94/228 (41.23%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 66  YKSLRKTASTSSEPDIVRTLVFDNGLLP--------PLISP--------------AKRTV 125
           ++     A   S P ++  LV +NG L         P+ SP               K+ V
Sbjct: 50  FRDYNVEAPPPSSPSVLPPLVEENGGLQKGDQRQVIPIPSPPAKYLLPEVTVLDYGKKCV 109

Query: 126 LLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFT 185
           ++DLDETLVHS    P    DF+V  +IDG I   YVLKRP VD+FL+ +   FE V+FT
Sbjct: 110 VIDLDETLVHSSF-KPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 169

Query: 186 AGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAY 245
           A L +YA  V + LD+  V   RL+R+SC    G YVKDLS +GR+L +V+IVD++P +Y
Sbjct: 170 ASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASY 229

Query: 246 VFQPENAIPIPSFIDDPTDMELRKLVKFFEVCECYDDMRDAVKQYLSR 272
           +F PENA+P+ S+ DD TD EL  L+ FFE     DD+   + +  +R
Sbjct: 230 IFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHRLCNR 276

[Close]

BLAST of Bhi07M000169 vs. ExPASy Swiss-Prot
Match: M9PFN0 (Phosphatase Herzog OS=Drosophila melanogaster OX=7227 GN=hzg PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.9e-39
Identity = 76/154 (49.35%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 100 KRTVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEI 159
           ++ +++DLDETLVHS   P P   DF+V  +IDG +   YVLKRP VD+FL+ + + +E 
Sbjct: 112 RKCMVIDLDETLVHSSFKPIPNA-DFIVPVEIDGTVHQVYVLKRPHVDEFLQKMGELYEC 171

Query: 160 VVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDN 219
           V+FTA L +YA  V + LDK +V   RL+R+SC    G Y+KDL+ +GRDL+++VIVD++
Sbjct: 172 VLFTASLAKYADPVADLLDKWNVFRARLFRESCVYYRGNYIKDLNRLGRDLQKIVIVDNS 231

Query: 220 PNAYVFQPENAIPIPSFIDDPTDMELRKLVKFFE 254
           P +Y+F P+NA+P+ S+ DD TD ELR+L+  FE
Sbjct: 232 PASYIFHPDNAVPVKSWFDDVTDCELRELIPLFE 264

[Close]

BLAST of Bhi07M000169 vs. ExPASy Swiss-Prot
Match: Q9PTJ6 (CTD small phosphatase-like protein OS=Gallus gallus OX=9031 GN=NFI1 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 84/165 (50.91%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 91  LLPPLISP--AKRTVLLDLDETLVHSKLDPPPEKFDFVVRPKIDGEILNFYVLKRPGVDQ 150
           LLP L +    K+ V++DLDETLVHS    P    DF+V  +IDG I   YVLKRP VD+
Sbjct: 94  LLPELTASDYGKKCVVIDLDETLVHSSF-KPISNADFIVPVEIDGTIHQVYVLKRPHVDE 153

Query: 151 FLEALADKFEIVVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVEGKYVKDLSEIGR 210
           FL+ + + FE V+FTA L +YA  V + LD+  V   RL+R+SC    G YVKDLS +GR
Sbjct: 154 FLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGR 213

Query: 211 DLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPTDMELRKLVKFFE 254
           +L +V+IVD++P +Y+F PENA+P+ S+ DD TD EL  L+ FFE
Sbjct: 214 ELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFE 257

[Close]

BLAST of Bhi07M000169 vs. ExPASy TrEMBL
Match: A0A5A7UBM8 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002050 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 0


Query: 5   SKIIKRSPTKPFRRHRRKSPIKNASSAVVATIHRSLYTCHRRLLKIFSKLARISTPNRHK 64
           SKIIKRSPT PFRRHRRKSPIKNASSAVVATI+RSLYTCHRRLLKIFSKLARISTPNRHK
Sbjct: 3   SKIIKRSPTHPFRRHRRKSPIKNASSAVVATINRSLYTCHRRLLKIFSKLARISTPNRHK 62

Query: 65  GYKSLRKT---ASTSSEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPE 124
           GYKSLRKT   +S+SSE DIVRTLVFDN LLPPLISPAKRTVLLDLDETLVHSKLDPPP+
Sbjct: 63  GYKSLRKTSSSSSSSSESDIVRTLVFDNRLLPPLISPAKRTVLLDLDETLVHSKLDPPPK 122

Query: 125 KFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 184
           KFDFVVRP+IDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS
Sbjct: 123 KFDFVVRPRIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 182

Query: 185 VISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPT 244
           VISHRLYRDSCKEV+GKYVKDLSEIGRDLRRVVIVDDNPNAYV+QPENAIPIPSF+DDP 
Sbjct: 183 VISHRLYRDSCKEVDGKYVKDLSEIGRDLRRVVIVDDNPNAYVYQPENAIPIPSFVDDPA 242

Query: 245 DMELRKLVKFFEVCECYDDMRDAVKQYLSREE 274
           DMELRKLV+FFEVC+CYDDMRDAVKQYLSREE
Sbjct: 243 DMELRKLVRFFEVCDCYDDMRDAVKQYLSREE 274

[Close]

BLAST of Bhi07M000169 vs. ExPASy TrEMBL
Match: A0A5D3CPX7 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008430 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 0


Query: 5   SKIIKRSPTKPFRRHRRKSPIKNASSAVVATIHRSLYTCHRRLLKIFSKLARISTPNRHK 64
           SKIIKRSPT PFRRHRRKSPIKNASSAVVATI+RSLYTCHRRLLKIFSKLARISTPNRHK
Sbjct: 156 SKIIKRSPTHPFRRHRRKSPIKNASSAVVATINRSLYTCHRRLLKIFSKLARISTPNRHK 215

Query: 65  GYKSLRKT---ASTSSEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPE 124
           GYKSLRKT   +S+SSE DIVRTLVFDN LLPPLISPAKRTVLLDLDETLVHSKLDPPP+
Sbjct: 216 GYKSLRKTSSSSSSSSESDIVRTLVFDNRLLPPLISPAKRTVLLDLDETLVHSKLDPPPK 275

Query: 125 KFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 184
           KFDFVVRP+IDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS
Sbjct: 276 KFDFVVRPRIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 335

Query: 185 VISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPT 244
           VISHRLYRDSCKEV+GKYVKDLSEIGRDLRRVVIVDDNPNAYV+QPENAIPIPSF+DDP 
Sbjct: 336 VISHRLYRDSCKEVDGKYVKDLSEIGRDLRRVVIVDDNPNAYVYQPENAIPIPSFVDDPA 395

Query: 245 DMELRKLVKFFEVCECYDDMRDAVKQYLSREE 274
           DMELRKLV+FFEVC+CYDDMRDAVKQYLSREE
Sbjct: 396 DMELRKLVRFFEVCDCYDDMRDAVKQYLSREE 427

[Close]

BLAST of Bhi07M000169 vs. ExPASy TrEMBL
Match: E5GC25 (Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 0


Query: 5   SKIIKRSPTKPFRRHRRKSPIKNASSAVVATIHRSLYTCHRRLLKIFSKLARISTPNRHK 64
           SKIIKRSPT PFRRHRRKSPIKNASSAVVATI+RSLYTCHRRLLKIFSKLARISTPNRHK
Sbjct: 3   SKIIKRSPTHPFRRHRRKSPIKNASSAVVATINRSLYTCHRRLLKIFSKLARISTPNRHK 62

Query: 65  GYKSLRKT---ASTSSEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPE 124
           GYKSLRKT   +S+SSE DIVRTLVFDN LLPPLISPAKRTVLLDLDETLVHSKLDPPP+
Sbjct: 63  GYKSLRKTSSSSSSSSESDIVRTLVFDNRLLPPLISPAKRTVLLDLDETLVHSKLDPPPK 122

Query: 125 KFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 184
           KFDFVVRP+IDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS
Sbjct: 123 KFDFVVRPRIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 182

Query: 185 VISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPT 244
           VISHRLYRDSCKEV+GKYVKDLSEIGRDLRRVVIVDDNPNAYV+QPENAIPIPSF+DDP 
Sbjct: 183 VISHRLYRDSCKEVDGKYVKDLSEIGRDLRRVVIVDDNPNAYVYQPENAIPIPSFVDDPA 242

Query: 245 DMELRKLVKFFEVCECYDDMRDAVKQYLSREE 274
           DMELRKLV+FFEVC+CYDDMRDAVKQYLSREE
Sbjct: 243 DMELRKLVRFFEVCDCYDDMRDAVKQYLSREE 274

[Close]

BLAST of Bhi07M000169 vs. ExPASy TrEMBL
Match: A0A1S3B010 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo OX=3656 GN=LOC103484427 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 0


Query: 5   SKIIKRSPTKPFRRHRRKSPIKNASSAVVATIHRSLYTCHRRLLKIFSKLARISTPNRHK 64
           SKIIKRSPT PFRRHRRKSPIKNASSAVVATI+RSLYTCHRRLLKIFSKLARISTPNRHK
Sbjct: 3   SKIIKRSPTHPFRRHRRKSPIKNASSAVVATINRSLYTCHRRLLKIFSKLARISTPNRHK 62

Query: 65  GYKSLRKT---ASTSSEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPE 124
           GYKSLRKT   +S+SSE DIVRTLVFDN LLPPLISPAKRTVLLDLDETLVHSKLDPPP+
Sbjct: 63  GYKSLRKTSSSSSSSSESDIVRTLVFDNRLLPPLISPAKRTVLLDLDETLVHSKLDPPPK 122

Query: 125 KFDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 184
           KFDFVVRP+IDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS
Sbjct: 123 KFDFVVRPRIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKS 182

Query: 185 VISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPT 244
           VISHRLYRDSCKEV+GKYVKDLSEIGRDLRRVVIVDDNPNAYV+QPENAIPIPSF+DDP 
Sbjct: 183 VISHRLYRDSCKEVDGKYVKDLSEIGRDLRRVVIVDDNPNAYVYQPENAIPIPSFVDDPA 242

Query: 245 DMELRKLVKFFEVCECYDDMRDAVKQYLSREE 274
           DMELRKLV+FFEVC+CYDDMRDAVKQYLSREE
Sbjct: 243 DMELRKLVRFFEVCDCYDDMRDAVKQYLSREE 274

[Close]

BLAST of Bhi07M000169 vs. ExPASy TrEMBL
Match: A0A0A0KIC7 (FCP1 homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G520310 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.1e-137
Identity = 250/271 (92.25%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 5   SKIIKRSPTKPFRRHRRKSPIKNASSAVVATIHRSLYTCHRRLLKIFSKLARISTPNRHK 64
           SKIIKRSPT PFRRHRRKSPIKNA SAVVATI+RSLYTCHRRLLKIFSKLARISTPNRHK
Sbjct: 3   SKIIKRSPTNPFRRHRRKSPIKNAPSAVVATINRSLYTCHRRLLKIFSKLARISTPNRHK 62

Query: 65  GYKSLRKTASTS--SEPDIVRTLVFDNGLLPPLISPAKRTVLLDLDETLVHSKLDPPPEK 124
           GYKSLRKT S+S  SEPDIVRTLVFDN LLPPLI PAKRTVLLDLDETLVHSKLDPPP K
Sbjct: 63  GYKSLRKTNSSSSESEPDIVRTLVFDNRLLPPLIYPAKRTVLLDLDETLVHSKLDPPPAK 122

Query: 125 FDFVVRPKIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKSV 184
           FDFVVRP+IDGE+LNFYVLKRPGVDQFLEALADK+EIVVFTAGLKEYASLVLNHLDKKSV
Sbjct: 123 FDFVVRPRIDGEVLNFYVLKRPGVDQFLEALADKYEIVVFTAGLKEYASLVLNHLDKKSV 182

Query: 185 ISHRLYRDSCKEVEGKYVKDLSEIGRDLRRVVIVDDNPNAYVFQPENAIPIPSFIDDPTD 244
           ISHRLYRDSCKEV+GKYVKDLSEIGRDLRRVVIVDDNPNAYV+QPENAIPI SF+DDP D
Sbjct: 183 ISHRLYRDSCKEVDGKYVKDLSEIGRDLRRVVIVDDNPNAYVYQPENAIPITSFVDDPAD 242

Query: 245 MELRKLVKFFEVCECYDDMRDAVKQYLSREE 274
            ELRKLV+FFEVC+CYDDMRDAVKQYLSREE
Sbjct: 243 TELRKLVRFFEVCDCYDDMRDAVKQYLSREE 273

The following BLAST results are available for this feature:

BLAST of Bhi07M000169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45700.1	3.9e-63	47.52	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT1G29770.1	6.7e-55	45.28	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT1G29780.1	1.3e-53	59.30	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT5G11860.1	5.0e-34	45.40	SCP1-like small phosphatase 5	[more]
AT5G11860.2	5.0e-34	45.40	SCP1-like small phosphatase 5	[more]

BLAST of Bhi07M000169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XYL0	5.9e-40	49.72	Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum OX=4468...	[more]
P58465	2.3e-39	41.23	CTD small phosphatase-like protein OS=Mus musculus OX=10090 GN=Ctdspl PE=2 SV=3	[more]
O15194	2.9e-39	41.23	CTD small phosphatase-like protein OS=Homo sapiens OX=9606 GN=CTDSPL PE=1 SV=2	[more]
M9PFN0	3.9e-39	49.35	Phosphatase Herzog OS=Drosophila melanogaster OX=7227 GN=hzg PE=1 SV=1	[more]
Q9PTJ6	1.1e-38	50.91	CTD small phosphatase-like protein OS=Gallus gallus OX=9031 GN=NFI1 PE=2 SV=2	[more]

BLAST of Bhi07M000169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBM8	1.2e-139	93.75	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=C...	[more]
A0A5D3CPX7	1.2e-139	93.75	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=C...	[more]
E5GC25	1.2e-139	93.75	Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase OS=Cuc...	[more]
A0A1S3B010	1.2e-139	93.75	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=C...	[more]
A0A0A0KIC7	7.1e-137	92.25	FCP1 homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G5203...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004274	FCP1 homology domain	SMART	SM00577	forpap2	coord: 99..243 e-value: 9.5E-65 score: 231.1
IPR004274	FCP1 homology domain	PFAM	PF03031	NIF	coord: 102..262 e-value: 7.2E-52 score: 175.3
IPR004274	FCP1 homology domain	PROSITE	PS50969	FCP1	coord: 96..255 score: 44.759968
IPR011948	Dullard phosphatase domain, eukaryotic	TIGRFAM	TIGR02251	TIGR02251	coord: 100..264 e-value: 9.6E-61 score: 202.4
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 91..268 e-value: 1.3E-57 score: 196.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	PANTHER	PTHR12210	NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED	coord: 12..270
None	No IPR available	PANTHER	PTHR12210:SF148	C-TERMINAL DOMAIN SMALL PHOSPHATASE-RELATED	coord: 12..270
None	No IPR available	CDD	cd07521	HAD_FCP1-like	coord: 100..233 e-value: 8.36785E-53 score: 166.617
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 93..266

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi07G000169	Bhi07G000169	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M000169.utr5p1	Bhi07M000169.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M000169.exon1	Bhi07M000169.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi07M000169	cds.Bhi07M000169	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M000169.utr3p1	Bhi07M000169.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi07M000169	Bhi07M000169-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity