Bhi06M001567 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi06M001567
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Serine-rich protein-like protein
Location	chr6: 51437701 .. 51439230 (-)
Sequence length	1423
RNA-Seq Expression	Bhi06M001567
Synteny	Bhi06M001567

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATACATAGTGCGAGTGAAGACGGGTTTGCCAAACTCAACAGCCAAACGCGGCCTATTAGGCTTAGAAGAGCAGACCAGAAAGCTCTACATTCATCCCCCTTTCTCTCTCTTCTCTAACGAAAATGGCGGCAACTTCTCGAAGATCAAACGCATCAGTTCTCCGATCACTCTCACCGTCCGGAAGGTTCTACGGTTACCGGAGTTCATCTTCGTCGGCCTTCGCGTCCTCGTCCTCCAGTTTCTCCTCCGGATCCGCAACTTCCTTCTTCTGTAGATCGACTTCCCCGTCGCGTGTGAAGCTTCACGGTTCGCCTTCAGTTTCCGTGCCGTCCGTGCGGTTTTCTCTTGACCGTGCGACGTCTCCGAACAGATCCGTGTCTGTTTCTTCTCGCAGCGGAGGGAGTCATCGAGTCGTGCAGAGGCAGAGCAGTTCGAAGAGGACGTGTATGTGTTCTCCTACTACTCACCCTGGCTCGTTCCGGTGTAGTCTCCATAAAGGTATAATTTCGCAACCTACTGTTCCGTACTCGCCGAGTAGGTTGAATGCTCGTCGATCGGCGATGACGAATTCTCTTGTTAGAATCGGAGGCGTTGAAGGTGATCTCGTGAAGCGAGCTTTAGCTGCTTTGATTCGGCCTTCTTCTCATCAGCAACGCCGTCGATCTGATTTTAGGCCGAAGCGTAGCCGGCTCTCAATTATGTCAAAAGCCGAAGAAACACTATAATCATTCGGTATGATGAAATTGCCTAATCGATGAATTTCCGGAGATAGCCGCAGTTCTTCTAGTCCTCCGGCGGTTCGTGACGGTGACGATGCTATTCTTTTTCTCTGCGGAGACCGTTACCCACATTCATAGCTACAGATCTCTGAAATCTCCTTTGTACAAATTAATATTTTATACAGATTACTGGATATGAAATCGTTTGTGTTCGTCGCAATCGGCGCACAGATCAGACCTAAAATTGCGAGTAAATCGAGAAATCAATCACAATTTAATGAAATTCACATGAATTAAAAAAGGTGTTTAACCTCATCAATCGGACCAGATGTTAGAAATTAGGGTTTGGAAAATCCTCCATTAGCAGATTTGCCTCTCTTGCATCTTCTGTGTGTTCGTGCATTCCATTGTCTCCGCCGTCTGATTTGACGGTTCCGTCTCGATGAGCATACGGCACCGGCAGTGATCAGCCTCTTTCACCAGGGTTAAACCGCCGTTTGCTTTGTTGCTTTGTTCCCTTTCTTTATTTTTCTGGTAAAGAGGTATGATGGTAGGTGCTGCTTTTTCCTTTTTCTTCTCGTGATTCAGAATTTTTTTTTTCTTTGTGTTTTAATTTTTAATTTTATTTTTGTTTTTTTTGCAGGGATTGATTATCACCGCCAATGGATGGGGATTAATTATTATTATTATTAACATAAAGCAAAATTAGATATAATTTTTTTAAAAAAAATAGTTTGGATTATTATTATTATTCAAAGTTATTGGAAAATTATTTCAAATGGTAAAGTTCTTCAAAATATAGCAAAG

mRNA sequence

ATAAATACATAGTGCGAGTGAAGACGGGTTTGCCAAACTCAACAGCCAAACGCGGCCTATTAGGCTTAGAAGAGCAGACCAGAAAGCTCTACATTCATCCCCCTTTCTCTCTCTTCTCTAACGAAAATGGCGGCAACTTCTCGAAGATCAAACGCATCAGTTCTCCGATCACTCTCACCGTCCGGAAGGTTCTACGGTTACCGGAGTTCATCTTCGTCGGCCTTCGCGTCCTCGTCCTCCAGTTTCTCCTCCGGATCCGCAACTTCCTTCTTCTGTAGATCGACTTCCCCGTCGCGTGTGAAGCTTCACGGTTCGCCTTCAGTTTCCGTGCCGTCCGTGCGGTTTTCTCTTGACCGTGCGACGTCTCCGAACAGATCCGTGTCTGTTTCTTCTCGCAGCGGAGGGAGTCATCGAGTCGTGCAGAGGCAGAGCAGTTCGAAGAGGACGTGTATGTGTTCTCCTACTACTCACCCTGGCTCGTTCCGGTGTAGTCTCCATAAAGGTATAATTTCGCAACCTACTGTTCCGTACTCGCCGAGTAGGTTGAATGCTCGTCGATCGGCGATGACGAATTCTCTTGTTAGAATCGGAGGCGTTGAAGGTGATCTCGTGAAGCGAGCTTTAGCTGCTTTGATTCGGCCTTCTTCTCATCAGCAACGCCGTCGATCTGATTTTAGGCCGAAGCGTAGCCGGCTCTCAATTATGTCAAAAGCCGAAGAAACACTATAATCATTCGGTATGATGAAATTGCCTAATCGATGAATTTCCGGAGATAGCCGCAGTTCTTCTAGTCCTCCGGCGATTACTGGATATGAAATCGTTTGTGTTCGTCGCAATCGGCGCACAGATCAGACCTAAAATTGCGAGTAAATCGAGAAATCAATCACAATTTAATGAAATTCACATGAATTAAAAAAGGTGTTTAACCTCATCAATCGGACCAGATGTTAGAAATTAGGGTTTGGAAAATCCTCCATTAGCAGATTTGCCTCTCTTGCATCTTCTGTGTGTTCGTGCATTCCATTGTCTCCGCCGTCTGATTTGACGGTTCCGTCTCGATGAGCATACGGCACCGGCAGTGATCAGCCTCTTTCACCAGGGTTAAACCGCCGTTTGCTTTGTTGCTTTGTTCCCTTTCTTTATTTTTCTGGTAAAGAGGTATGATGGTAGGTGCTGCTTTTTCCTTTTTCTTCTCGTGATTCAGAATTTTTTTTTTCTTTGTGTTTTAATTTTTAATTTTATTTTTGTTTTTTTTGCAGGGATTGATTATCACCGCCAATGGATGGGGATTAATTATTATTATTATTAACATAAAGCAAAATTAGATATAATTTTTTTAAAAAAAATAGTTTGGATTATTATTATTATTCAAAGTTATTGGAAAATTATTTCAAATGGTAAAGTTCTTCAAAATATAGCAAAG

Coding sequence (CDS)

ATGGCGGCAACTTCTCGAAGATCAAACGCATCAGTTCTCCGATCACTCTCACCGTCCGGAAGGTTCTACGGTTACCGGAGTTCATCTTCGTCGGCCTTCGCGTCCTCGTCCTCCAGTTTCTCCTCCGGATCCGCAACTTCCTTCTTCTGTAGATCGACTTCCCCGTCGCGTGTGAAGCTTCACGGTTCGCCTTCAGTTTCCGTGCCGTCCGTGCGGTTTTCTCTTGACCGTGCGACGTCTCCGAACAGATCCGTGTCTGTTTCTTCTCGCAGCGGAGGGAGTCATCGAGTCGTGCAGAGGCAGAGCAGTTCGAAGAGGACGTGTATGTGTTCTCCTACTACTCACCCTGGCTCGTTCCGGTGTAGTCTCCATAAAGGTATAATTTCGCAACCTACTGTTCCGTACTCGCCGAGTAGGTTGAATGCTCGTCGATCGGCGATGACGAATTCTCTTGTTAGAATCGGAGGCGTTGAAGGTGATCTCGTGAAGCGAGCTTTAGCTGCTTTGATTCGGCCTTCTTCTCATCAGCAACGCCGTCGATCTGATTTTAGGCCGAAGCGTAGCCGGCTCTCAATTATGTCAAAAGCCGAAGAAACACTATAA

Protein sequence

MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKLHGSPSVSVPSVRFSLDRATSPNRSVSVSSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSFRCSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRSDFRPKRSRLSIMSKAEETL

Homology

[Close]

BLAST of Bhi06M001567 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 115/216 (53.24%), Postives = 145/216 (67.13%), Query Frame = 0


Query: 4   TSRRSNASVLRSLSPSGRFYGYRSS-------SSSAFASSSSSFSSGSATSFFC------ 63
           T+R + ++ LRS SPSGRF G  S+       SSS FASS+SS  S  +T+FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ----RSTSPSRVKLHGSPSVSVPSVRFSLD-RATSPNRSVSVSSRSGGSHRVVQRQSSSK 123
               RS SP+RV L  S  ++  S R+S+D R+ SPNRS++VSS    +H  +     S+
Sbjct: 68  HHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNKPSNHHKI---PDSR 127

Query: 124 RTCMCSPTTHPGSFRCSLHKGIIS---QPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLV 183
           R CMCSPTTHPGSFRCSLHK + +   Q T  Y+ + LN RRSAMTNSLVRIGGVEG+ V
Sbjct: 128 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 187

Query: 184 KRALAALIRPSSHQQRRRSDFRPKRSRLSIMSKAEE 199
           +RAL  LIRPSSHQ +RRS + P+RSRL+ MSKAE+
Sbjct: 188 RRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Bhi06M001567 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 115/216 (53.24%), Postives = 145/216 (67.13%), Query Frame = 0


Query: 4   TSRRSNASVLRSLSPSGRFYGYRSS-------SSSAFASSSSSFSSGSATSFFC------ 63
           T+R + ++ LRS SPSGRF G  S+       SSS FASS+SS  S  +T+FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ----RSTSPSRVKLHGSPSVSVPSVRFSLD-RATSPNRSVSVSSRSGGSHRVVQRQSSSK 123
               RS SP+RV L  S  ++  S R+S+D R+ SPNRS++VSS    +H  +     S+
Sbjct: 68  HHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNKPSNHHKI---PDSR 127

Query: 124 RTCMCSPTTHPGSFRCSLHKGIIS---QPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLV 183
           R CMCSPTTHPGSFRCSLHK + +   Q T  Y+ + LN RRSAMTNSLVRIGGVEG+ V
Sbjct: 128 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 187

Query: 184 KRALAALIRPSSHQQRRRSDFRPKRSRLSIMSKAEE 199
           +RAL  LIRPSSHQ +RRS + P+RSRL+ MSKAE+
Sbjct: 188 RRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Bhi06M001567 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 162.2 bits (409), Expect = 4.5e-40
Identity = 119/222 (53.60%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 1   MAATSRR--SNASVLRSLSPSGRFYG-----YRSSSSSAFASSSSSFSSGSATSFFC--- 60
           M  TS R  SN  VLRS SPSGRF G       SSSSSAFASS+SS  S  +++FF    
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHR 60

Query: 61  ---------RSTSPSRVKLHGSPSVSVPSVRFSLD-RATSP-NRSVSVSSRSGGSHRVVQ 120
                    RS SP+RV L+ +  +S  S R+SLD R+ SP N+S+SVS     SH    
Sbjct: 61  HHESNHSHHRSASPTRVNLYTAQPMS-QSFRYSLDSRSISPTNKSISVSKNQPPSH---- 120

Query: 121 RQSSSKRTCMCSPTTHPGSFRCSLHKGIIS---QPTVPYSPSRLNARRSAMTNSLVRIGG 180
                 R CMCSPTTHPGSFRCSLHK + +   Q T  Y+ + LN RRSAMTNSLVRIGG
Sbjct: 121 -NHKISRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGG 180

Query: 181 VEGDLVKRALAALIRPSSHQQRRRSDFRPKRSRLSIMSKAEE 199
           VEG+ V+RAL  LIRPSSH  +RR+ ++P+ SRLSIM+KA+E
Sbjct: 181 VEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of Bhi06M001567 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-12
Identity = 70/206 (33.98%), Postives = 93/206 (45.15%), Query Frame = 0


Query: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60
           MAAT  RS+ SVLR LS S R +          + S             C      R+K 
Sbjct: 1   MAATG-RSSRSVLRPLSSSQRLHNNHHHHHRQRSPSP------------CNKNLNLRLKF 60

Query: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSFR 120
           +   S+  PSV             V+VSS              +KR C+CSPTTHPGSFR
Sbjct: 61  YSPGSIPKPSV-------------VTVSS-----------NHQTKRKCLCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPTVPYSPSR----------------LNARRSAMTNSLVRIGGVEGDLVKR 180
           CS H+ +  + +   + S                 LN R+ A+ NSL +IG VE +  +R
Sbjct: 121 CSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRR 169

Query: 181 ALAA-LIRPSSHQQRRRSDFRPKRSR 190
           +LAA L +PSS    RR +FRP+ SR
Sbjct: 181 SLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Bhi06M001567 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 9.4e-06
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 93  GSHRVVQRQSSSKRTCMCSPTTHPGSFRCSLHKGIISQPT 133
           GS  + ++ S +K  C+CSPTTHPGSFRC +H+ +  Q T
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRT 68

[Close]

BLAST of Bhi06M001567 vs. ExPASy TrEMBL
Match: A0A5A7V7K3 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00990 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 186/201 (92.54%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60
           MAATSRRS+ASVLRSLSPSGRFYG+R+SSSSAFASS+S+FSS SATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSPSVSVPSVRFSLDRATSPNRSVSV-SSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSF 120
           HGSPSVSVPSVRFSLDRATSPNRSVSV SSRSGG++RVVQRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP   YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RSDFRPKRSRLSIMSKAEETL 201
           R DFRPKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Bhi06M001567 vs. ExPASy TrEMBL
Match: A0A1S4E2K6 (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 186/201 (92.54%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60
           MAATSRRS+ASVLRSLSPSGRFYG+R+SSSSAFASS+S+FSS SATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSS-RSGGSHRVVQRQSSSKRTCMCSPTTHPGSF 120
           HGSPSVSVPSVRFSLDRATSPNRSVSVSS RSGG++RVVQRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP   YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RSDFRPKRSRLSIMSKAEETL 201
           R DFRPKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Bhi06M001567 vs. ExPASy TrEMBL
Match: A0A0A0LL69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.4e-87
Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60
           MAATSRRS+ASVLRSLSPSGRFYG+R+SSSSAFASS+S+FSS SATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSPSVSVPSVRFSLDRATSPNRSVSV-SSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSF 120
           HGSPSVSVPSVRFSLDRATSPNRSVSV SSRSGG++RVVQRQSS+KRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP   YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RSDFRPKRSRLSIMSKAEETL 201
           R DFRPKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Bhi06M001567 vs. ExPASy TrEMBL
Match: A0A6J1HLP3 (uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 177/200 (88.50%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60
           MAATSRRSN SVLRS SPS RFYGYR+SS SAFASS+SSFSSGSATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGS SVSVPSVRF +DRA SPNRSVSVSSRS G ++VV+RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSSGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQP  PYSPSRL+ARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLSARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 SDFRPKRSRLSIMSKAEETL 201
            DF+PK SRLSIMSKA ETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Bhi06M001567 vs. ExPASy TrEMBL
Match: A0A6J1FCB9 (uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC111444107 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 176/200 (88.00%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60
           MAATSRRSN SVLRS SPS RFYGYR+SS SAFASS+SSFSSGSATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGS SVSVPSVRF +DRA SPNRSVSVSSR GG ++VV+RQ+SSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQP  PY PSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 SDFRPKRSRLSIMSKAEETL 201
            DF+PK SRLSIMSKA ETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

The following BLAST results are available for this feature:

BLAST of Bhi06M001567 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25280.1	2.1e-42	53.24	serine-rich protein-related	[more]
AT5G25280.2	2.1e-42	53.24	serine-rich protein-related	[more]
AT5G11090.1	4.5e-40	53.60	serine-rich protein-related	[more]
AT5G20370.1	1.8e-12	33.98	serine-rich protein-related	[more]
AT1G67910.1	9.4e-06	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi06M001567 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi06M001567 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7K3	2.9e-87	92.54	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S4E2K6	2.9e-87	92.54	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]
A0A0A0LL69	6.4e-87	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1	[more]
A0A6J1HLP3	1.1e-83	88.50	uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673...	[more]
A0A6J1FCB9	1.9e-83	88.00	uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC1114441...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..200
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..198
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi06G001567	Bhi06G001567	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M001567.exon2	Bhi06M001567.exon2	exon
Bhi06M001567.exon1	Bhi06M001567.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M001567.utr3p2	Bhi06M001567.utr3p2	three_prime_UTR
Bhi06M001567.utr3p1	Bhi06M001567.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi06M001567	cds.Bhi06M001567	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M001567.utr5p1	Bhi06M001567.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi06M001567	Bhi06M001567-protein	polypeptide