Bhi05M000254 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi05M000254
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	outer envelope membrane protein 7-like
Location	chr5: 7233181 .. 7236781 (+)
Sequence length	1939
RNA-Seq Expression	Bhi05M000254
Synteny	Bhi05M000254

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAAGGAAAGGGTGATCTTTGGACTAATTGGCCTTTGTTTCCTGAATTGGCGCTTTGTATATTTACAATCTCAAATTTTCTTCGTCGCTAAGGTAAGGAGGAAAGATCAATAGGAGCTCTCAGTCTCAGCTTCTAGGAGACCTAGCCGGAGCCGCCACAGCAAGAAGTAAGGAACAATGGGGAAGAAACCGTCTGGGACCAAGCAAGCATTTTTCGTCTTCGGAGCCTTGGCACTGGGTTGGCTCGCTATTGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAACTCTGATCCCGCTCAGGATCCCGACGACCTTGTCGATAACCAATCTGATCAGAGCCCATCTGATGACGATCAAAGTACCACTGCCACTGCTTAAACAGGTGATTTCAAGGTACGTACGACAGAGTGGGATGATGGTGAATAGTTTGCCCCCATCATGATCTGGTTGTACTGTATGAAAATTAGAATTTTAGATCTCACCCCTTCGTATCGTATAAGTTCAGGATTAGACCATTTTAATTGAATTAATAATGATTCTGCTTTAACTTCAATAATTTGTGCCTCAAATATCGGTATGTGCTTGTTCTGACTCCCGTAAATTTAATTACGAGCTTGGAAGTAGGAGGTATGCAGGCTACCGGTTCGAAGAATGGTTTAAAAGGAATAAGGTGTTTAACTTGTTTAATGTGGTTGGTTTGTGACAATGCGGCTACGTGTTGCACACTTCTGTATAGAAATTAACTGAATTAAAGCCCCTGCTTATGAGCTTTCTCAGAGATAAATTACTCTCCGAACAAAGGCTTGTCTGTTGGAAATCACTTTCTCTTGTGCCCACGATAGAGCTGATAATTAAATTAGATGTTATCAAATGTCATTTGGGTGATTTAGCCTTGTTATGACAATCTTGGAACTGACAACTGATATTAGGCACAAAGTTGAGTAAAACTGGTAATTTTTTTAAGGATGACCTAAATTTGGTTGCGCTAACGTGGAATTACTTGGATTCTAAAAACAATAAAAGCTAACTGTTTGCTTATGTCACAAAGTACTTAGATCGCATTGGCTACTTTCTCCATGCCTCTCATTCACGCTCCTTTGTACTGGAAAAAAAGACTCAATTATGTTAAAATAAGAAATTGAAAGATTTCGGGGAAATCCTCGGGGCTTTTGTTTCTCTTTCTCCTATCAAACATTGGAAGAAGAGAAAATCTCCACGTTCCTCTCTCATATCCTCATGCTTACTATAGATGATTGGAAGGTGGCTAAAAGCATGAGCGTGAGGGTTCGTTGGATAGTGATGAAAAGTCGATCGATGGCTTGAAGTCCGAGTATGAGCGATGGTTGAAGCAGGTGATGAACAGTCAAAAAGTGGCCACAAGTGCAAGCGAGAGAGGAAAGGTAGAAGGAAGAAGTGGGTGGGAGAGGTGGAGGGAAGAAGGTTGTAAGAGTCTATAGGAGAAAGGCGTGCAAGAGAGAAAGGGACGAAAAAAGTAGGGAGTGCGATCTAAGTGGTATGCATAAGCAAAAGGTTAGAATTCATTATTTTTAAAATTTAGATCATTCGACATTAATGCAACACAGATTGGGTCATCCGTATAAAAAATGAGTGTTTTGCTTTTACATCAATGTCATACCTGTGTCAAACATTATTTGATGGCCTAGGTGCACCCCCACATCTATGGCTCGATTGATACCACTTGCATTCTCCTTCCACTTTGGTTTTTAATATCAAGATCCATTTTTAAGCTATGAACGTTTAACTACCTTTTAATGACATTAGATAGCTGTTTTATTTTTTATTTTTATTTTTTTTTAATCATGACATGCCAACTTTTGGTGCTGACCTTCATAGGATAAATGGTGAGAAGGAATAACGAAACTACAATCCGTTAGCCTATTTAAGTTTTGAATAGCACCTCCATCTTTTGATATGTCTTCTGGTTTCCTTTTATGTTTTTGTGAAGGAGGGTGGTTTATCTGTAGGGACAAAAAGGATGGAATGGAGAGACAGCGATGCAAATGGTTGTACCAAAATTGTTGAATAAACATGATCGCTAAGCGAGAGCTTCCGAAGCTTTCTTTTTGTCTTCGCGTACCCATCTGGGTATTGCGTTCGGAAAAATGAAAAAAATATCGTACAAATAAACATTTTGCCAGACAAGCTTTTAGCTTGTTGTTCTAATTTCTGAAATGTTAAGATATGATTGCAAGATTTTGGTTTTGTGAATCACTATGGGAACTCCAACATTAATATCGACTCATCTGCTTTGATTTAGTTTAAGAACCATGCATCTAACACTACTTGCTTTTTTGAGCATCATGTCATAGGAAAACAACCAATCAGCTTCCTGACTTCAAAAAGAAAAAACACAATCCCGAGCCTGGATCAATCCATATAAGACAATAGAGATAAGGAAGTGAAACCAAGTGGAATTGAAAGAAGGGATAACATTTAGACAGACCACTAGTCTAATCATCAAATGGGTATTGCTCGTACCTAATCATACAGTCATGGAGCACCGCACGGCCACCAATACTCATTTGACAAGTTCCCAACATGTTGGTCTTAGCAGCCCCAAGACAAGCGGTGCAGTCTGAGGTTGTGAGATTCTGGTTGCAGGAAGCATGACCATAAGCGAAGGAATTAGGATAAGGAGATATGTTGTAGAAATCATATTTCTTTATAGTGGGAGTTGAACTCTCCAATTCTTTGAGAACGTAATCCAGACTCACTGCGAAAGGATCGCCCCCTGTGAAAGTTCCGGAGTTGCACAAAACTGACCTCACTCCGGTGTTCGGAACGCTCACCACCATAGTAGACAACGCAAAGAAAGCGAAAAAAGCCGCTGAAATCTTCACACTAGAACCGATCATCTCTTCTTCTTCTTCCTCTTCTTCTTGATTTTTGATCTGGATTAGGTATAACAAGGCATTTGACGTTGAAGCAGAAGTGGGTCCCTACCTATTTTCTTGCTTCTGCCCAATTCTATGAATTTTTCTTTAGAAAAATCACAAATTCTTTTATGCCTTTGTTTTCTTCTCTGGTTTTGACACATTCCTTTGCCATTGGTCTCTTCCATAAAGTCAAAATTTTGTCTTAGTTTTCGAAGGAGAAATCAAAGAGTTCTAGTCACAATTTTAACTTCTTTTGCAGTAAGAAAAATAGTCAAGTGAAAGCTAATCGAAGTAGTTCTCATGTATAGTTCTATTCATAAGAAGACACGTCTTTATTGCATAGCCGTATAATTCCCTACTTGCTGAAACAGGATTTTAAAGTAATTAGAGTTTTATCTTCTAGAGATTTAGTAATGGTATAACACTCCTCTTGCTAACCTGGCTATAAGTAAGTTCTTATAAGCAAGAACCCCCAACCAATAGGATTTCCAAATTCATTCTCATCTATAATTGAAAATTAAGATGACTAAATTTCATCAACAGAAACCATAAATTTGGGAGATGTCAGAAACCATTCAAAAAAATTTCATCTTTCACATTTAACACCTTTTTGGTAATTCGTTGTAATAGTTTTTCTTGATAGGGACTTCGAGATTTGGATAAAAATTTAACTTCTTTTCATCG

mRNA sequence

ATTTTAAGGAAAGGGTGATCTTTGGACTAATTGGCCTTTGTTTCCTGAATTGGCGCTTTGTATATTTACAATCTCAAATTTTCTTCGTCGCTAAGGTAAGGAGGAAAGATCAATAGGAGCTCTCAGTCTCAGCTTCTAGGAGACCTAGCCGGAGCCGCCACAGCAAGAAGTAAGGAACAATGGGGAAGAAACCGTCTGGGACCAAGCAAGCATTTTTCGTCTTCGGAGCCTTGGCACTGGGTTGGCTCGCTATTGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAACTCTGATCCCGCTCAGGATCCCGACGACCTTGTCGATAACCAATCTGATCAGAGCCCATCTGATGACGATCAAAGTACCACTGCCACTGCTTAAACAGGTGATTTCAAGGAGGGTGGTTTATCTGTAGGGACAAAAAGGATGGAATGGAGAGACAGCGATGCAAATGGTTGTACCAAAATTGTTGAATAAACATGATCGCTAAGCGAGAGCTTCCGAAGCTTTCTTTTTGTCTTCGCGTACCCATCTGGGTATTGCGTTCGGAAAAATGAAAAAAATATCGTACAAATAAACATTTTGCCAGACAAGCTTTTAGCTTGTTGTTCTAATTTCTGAAATGTTAAGATATGATTGCAAGATTTTGGTTTTGTGAATCACTATGGGAACTCCAACATTAATATCGACTCATCTGCTTTGATTTAGTTTAAGAACCATGCATCTAACACTACTTGCTTTTTTGAGCATCATGTCATAGGAAAACAACCAATCAGCTTCCTGACTTCAAAAAGAAAAAACACAATCCCGAGCCTGGATCAATCCATATAAGACAATAGAGATAAGGAAGTGAAACCAAGTGGAATTGAAAGAAGGGATAACATTTAGACAGACCACTAGTCTAATCATCAAATGGCCCCAAGACAAGCGGTGCAGTCTGAGGTTGTGAGATTCTGGTTGCAGGAAGCATGACCATAAGCGAAGGAATTAGGATAAGGAGATATGTTGTAGAAATCATATTTCTTTATAGTGGGAGTTGAACTCTCCAATTCTTTGAGAACGTAATCCAGACTCACTGCGAAAGGATCGCCCCCTGTGAAAGTTCCGGAGTTGCACAAAACTGACCTCACTCCGGTGTTCGGAACGCTCACCACCATAGTAGACAACGCAAAGAAAGCGAAAAAAGCCGCTGAAATCTTCACACTAGAACCGATCATCTCTTCTTCTTCTTCCTCTTCTTCTTGATTTTTGATCTGGATTAGGTATAACAAGGCATTTGACGTTGAAGCAGAAGTGGGTCCCTACCTATTTTCTTGCTTCTGCCCAATTCTATGAATTTTTCTTTAGAAAAATCACAAATTCTTTTATGCCTTTGTTTTCTTCTCTGGTTTTGACACATTCCTTTGCCATTGGTCTCTTCCATAAAGTCAAAATTTTGTCTTAGTTTTCGAAGGAGAAATCAAAGAGTTCTAGTCACAATTTTAACTTCTTTTGCAGTAAGAAAAATAGTCAAGTGAAAGCTAATCGAAGTAGTTCTCATGTATAGTTCTATTCATAAGAAGACACGTCTTTATTGCATAGCCGTATAATTCCCTACTTGCTGAAACAGGATTTTAAAGTAATTAGAGTTTTATCTTCTAGAGATTTAGTAATGGTATAACACTCCTCTTGCTAACCTGGCTATAAGTAAGTTCTTATAAGCAAGAACCCCCAACCAATAGGATTTCCAAATTCATTCTCATCTATAATTGAAAATTAAGATGACTAAATTTCATCAACAGAAACCATAAATTTGGGAGATGTCAGAAACCATTCAAAAAAATTTCATCTTTCACATTTAACACCTTTTTGGTAATTCGTTGTAATAGTTTTTCTTGATAGGGACTTCGAGATTTGGATAAAAATTTAACTTCTTTTCATCG

Coding sequence (CDS)

ATGGGGAAGAAACCGTCTGGGACCAAGCAAGCATTTTTCGTCTTCGGAGCCTTGGCACTGGGTTGGCTCGCTATTGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAACTCTGATCCCGCTCAGGATCCCGACGACCTTGTCGATAACCAATCTGATCAGAGCCCATCTGATGACGATCAAAGTACCACTGCCACTGCTTAA

Protein sequence

MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQSPSDDDQSTTATA

Homology

[Close]

BLAST of Bhi05M000254 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-12
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 4  KPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDD 52
          K SG KQA  V  A+ALGWLAIE+AFKPFLDK RS++D SDP +DPDD
Sbjct: 3  KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKSDPTKDPDD 50

[Close]

BLAST of Bhi05M000254 vs. TAIR 10
Match: AT3G63160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 7.5e-06
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 3  KKPSGTKQ-AFFVFGALALGWLAIEMAFKPFLDKARSAMDNSD 45
          +KP+G KQ A  V G LA+GWLAIE+ FKP   K  S+ D SD
Sbjct: 15 EKPTGKKQTATVVVGVLAVGWLAIELVFKPLFKKLSSSKDKSD 57

[Close]

BLAST of Bhi05M000254 vs. ExPASy Swiss-Prot
Match: Q9SVC4 (Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-11
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 4  KPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDD 52
          K SG KQA  V  A+ALGWLAIE+AFKPFLDK RS++D SDP +DPDD
Sbjct: 3  KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKSDPTKDPDD 50

[Close]

BLAST of Bhi05M000254 vs. ExPASy TrEMBL
Match: A0A6J1DS29 (outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC111022685 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQS 60
          MGKKPSGTKQAF +FGALALGWLAIEMAFKPFLDKARSAMD SDP +DPDDLVDN SD  
Sbjct: 1  MGKKPSGTKQAFVLFGALALGWLAIEMAFKPFLDKARSAMDKSDPTRDPDDLVDNLSDHR 60

Query: 61 PSDDDQSTTA 71
          PSDDD+STTA
Sbjct: 61 PSDDDESTTA 70

[Close]

BLAST of Bhi05M000254 vs. ExPASy TrEMBL
Match: A0A6J1HGS4 (outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111463949 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-22
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 1  MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQS 60
          MGKKPSG+KQAFF+ GALALGWLAIEMAFKPFLDKARSAMDNSDP +DPDD +D QSD  
Sbjct: 1  MGKKPSGSKQAFFILGALALGWLAIEMAFKPFLDKARSAMDNSDPTRDPDDRLDKQSDHL 60

Query: 61 PSDDDQSTTA 71
           SDDD+STTA
Sbjct: 61 QSDDDRSTTA 70

[Close]

BLAST of Bhi05M000254 vs. ExPASy TrEMBL
Match: A0A5A7URM9 (6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00570 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.8e-22
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQS 60
          M K+PSGT QAFFVF ALA+GWLAIEMAFKPFLDKARSAMD SDPA+DPD+LVDNQSD +
Sbjct: 1  MSKRPSGTTQAFFVFSALAMGWLAIEMAFKPFLDKARSAMDKSDPARDPDELVDNQSDHT 60

Query: 61 PSDDDQSTTATA 73
           SDDDQST  T+
Sbjct: 61 SSDDDQSTIVTS 72

[Close]

BLAST of Bhi05M000254 vs. ExPASy TrEMBL
Match: A0A6J1HUQ5 (outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111467002 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.9e-22
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 1  MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQS 60
          MGKKPSG+KQAFF+ GALALGWLAIE+AFKPFLDKARSAMDNSDP +DPDDL+D QSD  
Sbjct: 1  MGKKPSGSKQAFFILGALALGWLAIEIAFKPFLDKARSAMDNSDPTRDPDDLLDKQSDHL 60

Query: 61 PSDDDQSTTA 71
           SDDD+ST A
Sbjct: 61 QSDDDRSTNA 70

[Close]

BLAST of Bhi05M000254 vs. ExPASy TrEMBL
Match: A0A0A0KJE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MGKKPSGTKQAFFVFGALALGWLAIEMAFKPFLDKARSAMDNSDPAQDPDDLVDNQSDQS 60
          M  K S TKQAFFVFGALA+GWLAIEMAFKP L KARSAMD SDPA+DPD+L+D+ S   
Sbjct: 1  MTNKSSETKQAFFVFGALAMGWLAIEMAFKPLLGKARSAMDKSDPARDPDELLDHTS--- 60

Query: 61 PSDDDQSTTATA 73
           SDDD++ T TA
Sbjct: 61 -SDDDRNATGTA 68

The following BLAST results are available for this feature:

BLAST of Bhi05M000254 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52420.1	1.1e-12	70.83	outer envelope membrane protein 7	[more]
AT3G63160.1	7.5e-06	55.81	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

BLAST of Bhi05M000254 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVC4	1.5e-11	70.83	Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 S...	[more]

BLAST of Bhi05M000254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS29	1.4e-23	87.14	outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HGS4	4.4e-22	82.86	outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A5A7URM9	5.8e-22	80.56	6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa ...	[more]
A0A6J1HUQ5	9.9e-22	81.43	outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC1114670...	[more]
A0A0A0KJE9	1.1e-15	70.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..72
None	No IPR available	PANTHER	PTHR33982:SF5	OUTER ENVELOPE MEMBRANE PROTEIN 7	coord: 4..65
IPR038944	Outer envelope membrane protein 7-like	PANTHER	PTHR33982	OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATED	coord: 4..65

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi05G000254	Bhi05G000254	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M000254.utr5p1	Bhi05M000254.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M000254.exon1	Bhi05M000254.exon1	exon
Bhi05M000254.exon2	Bhi05M000254.exon2	exon
Bhi05M000254.exon3	Bhi05M000254.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi05M000254	cds.Bhi05M000254	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M000254.utr3p1	Bhi05M000254.utr3p1	three_prime_UTR
Bhi05M000254.utr3p2	Bhi05M000254.utr3p2	three_prime_UTR
Bhi05M000254.utr3p3	Bhi05M000254.utr3p3	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi05M000254	Bhi05M000254-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031359	integral component of chloroplast outer membrane