Bhi05M000240 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi05M000240
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr5: 6868272 .. 6868761 (-)
Sequence length	423
RNA-Seq Expression	Bhi05M000240
Synteny	Bhi05M000240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAGAGATTTGGACTCGATAACTGCAAGTGTCGCTTGGGAAGAATTCTCAAGGTTGGTGGAAGCAATAATGAGAGTAGAAAAGAGTTTGACGATGGGGGAAAATGGAGAAGGAGGTGGCTCAACAAGAAAACAAATAGGAAAGGAAGGAAACGGGAAGTTTGTTCCAGGAGTAGCAAACAAAGGAACATTTAGAAAGAAAGGTGCTTCACGATTTGTTTCAGGAAGCACTAGTCAATGCTACTCCAAAATCAGTTGCTAGTTATACTAGGAGACCTTGGTGCTCCAAATGTAATAGGTATAACTGAGGGTAATCGTGCTCGGAGAAAACAAATGTCTTTTATAACCATGGACAAACTAGACACTTCATAAGGGAATGTCCACAAATGGCATCTGGGAATGAAAAGACCACTTCCCAGACGAATAATCAAGAGATTGGACCATCGGTGGAAGATAGAAAACAACCGGAGGAATTAAAGAAGAAGGGAATA

mRNA sequence

ACAAGAGATTTGGACTCGATAACTGCAAGTGTCGCTTGGGAAGAATTCTCAAGGTTGGTGGAAGCAATAATGAGAGTAGAAAAGAGTTTGACGATGGGGGAAAATGGAGAAGGAGGTGGCTCAACAAGAAAACAAATAGGAAAGGAAGGAAACGGGAAGTTTGTTCCAGGAGTAGCAAACAAAGGAACATTTAGAAAGAAAGGTGCTTCACGATTTGTTTCAGGAAGCACTATTATACTAGGAGACCTTGGTGCTCCAAATGTAATAGGTATAACTGAGGGTAATCGTGCTCGGAGAAAACAAATGGAATGTCCACAAATGGCATCTGGGAATGAAAAGACCACTTCCCAGACGAATAATCAAGAGATTGGACCATCGGTGGAAGATAGAAAACAACCGGAGGAATTAAAGAAGAAGGGAATA

Coding sequence (CDS)

ACAAGAGATTTGGACTCGATAACTGCAAGTGTCGCTTGGGAAGAATTCTCAAGGTTGGTGGAAGCAATAATGAGAGTAGAAAAGAGTTTGACGATGGGGGAAAATGGAGAAGGAGGTGGCTCAACAAGAAAACAAATAGGAAAGGAAGGAAACGGGAAGTTTGTTCCAGGAGTAGCAAACAAAGGAACATTTAGAAAGAAAGGTGCTTCACGATTTGTTTCAGGAAGCACTATTATACTAGGAGACCTTGGTGCTCCAAATGTAATAGGTATAACTGAGGGTAATCGTGCTCGGAGAAAACAAATGGAATGTCCACAAATGGCATCTGGGAATGAAAAGACCACTTCCCAGACGAATAATCAAGAGATTGGACCATCGGTGGAAGATAGAAAACAACCGGAGGAATTAAAGAAGAAGGGAATA

Protein sequence

TRDLDSITASVAWEEFSRLVEAIMRVEKSLTMGENGEGGGSTRKQIGKEGNGKFVPGVANKGTFRKKGASRFVSGSTIILGDLGAPNVIGITEGNRARRKQMECPQMASGNEKTTSQTNNQEIGPSVEDRKQPEELKKKGI

Homology

The following BLAST results are available for this feature:

BLAST of Bhi05M000240 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05M000240 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05M000240 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..58

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi05G000240	Bhi05G000240	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M000240.exon3	Bhi05M000240.exon3	exon
Bhi05M000240.exon2	Bhi05M000240.exon2	exon
Bhi05M000240.exon1	Bhi05M000240.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi05M000240	cds.Bhi05M000240_3	CDS
cds.Bhi05M000240	cds.Bhi05M000240_2	CDS
cds.Bhi05M000240	cds.Bhi05M000240	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi05M000240	Bhi05M000240-protein	polypeptide