Bhi04M001854 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi04M001854
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr4: 62130811 .. 62131000 (+)
Sequence length	190
RNA-Seq Expression	Bhi04M001854
Synteny	Bhi04M001854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTCGCCCACGCAGAAGCCATCGCTCACGCCGCACTGTTCGTCCGCCGCTCACCCATCCAGCCACGCGCGTCAGATCTGTCTGACGTCGGACCGCCCGAAGTTACCACGCGCTCCAGCCGTCTCCGTCACTCCATCCCATTTGCGTGTTGAGACGTCGTCGACACCTTCCGGACACCGTCGGTCGTAG

mRNA sequence

GGTGTCGCCCACGCAGAAGCCATCGCTCACGCCGCACTGTTCGTCCGCCGCTCACCCATCCAGCCACGCGCGTCAGATCTGTCTGACGTCGGACCGCCCGAAGTTACCACGCGCTCCAGCCGTCTCCGTCACTCCATCCCATTTGCGTGTTGAGACGTCGTCGACACCTTCCGGACACCGTCGGTCGTAG

Coding sequence (CDS)

GGTGTCGCCCACGCAGAAGCCATCGCTCACGCCGCACTGTTCGTCCGCCGCTCACCCATCCAGCCACGCGCGTCAGATCTGTCTGACGTCGGACCGCCCGAAGTTACCACGCGCTCCAGCCGTCTCCGTCACTCCATCCCATTTGCGTGTTGAGACGTCGTCGACACCTTCCGGACACCGTCGGTCGTAG

Protein sequence

VSPTQKPSLTPHCSSAAHPSSHARQICLTSDRPKLPRAPAVSVTPSHLRVETSSTPSGHRRS

Homology

The following BLAST results are available for this feature:

BLAST of Bhi04M001854 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04M001854 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04M001854 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi04G001854	Bhi04G001854	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi04M001854.exon1	Bhi04M001854.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi04M001854	cds.Bhi04M001854	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi04M001854	Bhi04M001854-protein	polypeptide