
Bhi04M000740 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACCAGACATATGACCAAGCAGTGTGTGGTGTTATTGTTTGTGTTGTGTTTGGCAATACTTGATGAGACCAAGGCTGCGGAGCTTGCAAAATGGCAAATCCACGTTGTGAATGGGCTCAACAATGGCCAAATCCTATTTGTTCATTGTAAATCTAAAGACAATGATTTAGGAGAACACAAACTAAATGTTGGAAGTGAATTCAATTGGAGGTTTAGAGTAAACTTTTGGAATACAACGTTGTTCTGGTGTTACTTGCAGAAGCCAAATGCACAACATTCATCGTTCCAAGCCTTCTGGACTGAGAGCACATCAGTTTGGCTCTATAATATGTGCTACGATTCTAACTGTATTTGGATTGCTAAAGATGATGGAATTTATTTAAAAGACAACACTAATCATAAAGATGTTTTGATTCATAAATGGGAATAA ATGAAAACCAGACATATGACCAAGCAGTGTGTGGTGTTATTGTTTGTGTTGTGTTTGGCAATACTTGATGAGACCAAGGCTGCGGAGCTTGCAAAATGGCAAATCCACGTTGTGAATGGGCTCAACAATGGCCAAATCCTATTTGTTCATTGTAAATCTAAAGACAATGATTTAGGAGAACACAAACTAAATGTTGGAAGTGAATTCAATTGGAGGTTTAGAGTAAACTTTTGGAATACAACGTTGTTCTGGTGTTACTTGCAGAAGCCAAATGCACAACATTCATCGTTCCAAGCCTTCTGGACTGAGAGCACATCAGTTTGGCTCTATAATATGTGCTACGATTCTAACTGTATTTGGATTGCTAAAGATGATGGAATTTATTTAAAAGACAACACTAATCATAAAGATGTTTTGATTCATAAATGGGAATAA ATGAAAACCAGACATATGACCAAGCAGTGTGTGGTGTTATTGTTTGTGTTGTGTTTGGCAATACTTGATGAGACCAAGGCTGCGGAGCTTGCAAAATGGCAAATCCACGTTGTGAATGGGCTCAACAATGGCCAAATCCTATTTGTTCATTGTAAATCTAAAGACAATGATTTAGGAGAACACAAACTAAATGTTGGAAGTGAATTCAATTGGAGGTTTAGAGTAAACTTTTGGAATACAACGTTGTTCTGGTGTTACTTGCAGAAGCCAAATGCACAACATTCATCGTTCCAAGCCTTCTGGACTGAGAGCACATCAGTTTGGCTCTATAATATGTGCTACGATTCTAACTGTATTTGGATTGCTAAAGATGATGGAATTTATTTAAAAGACAACACTAATCATAAAGATGTTTTGATTCATAAATGGGAATAA MKTRHMTKQCVVLLFVLCLAILDETKAAELAKWQIHVVNGLNNGQILFVHCKSKDNDLGEHKLNVGSEFNWRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWTESTSVWLYNMCYDSNCIWIAKDDGIYLKDNTNHKDVLIHKWE Homology
BLAST of Bhi04M000740 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Bhi04M000740 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 115.9 bits (289), Expect = 2.6e-26 Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Bhi04M000740 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 0
BLAST of Bhi04M000740 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 74.7 bits (182), Expect = 6.7e-14 Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 0
BLAST of Bhi04M000740 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 68.6 bits (166), Expect = 4.8e-12 Identity = 41/135 (30.37%), Postives = 59/135 (43.70%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26 Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.7e-25 Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 9.5e-13 Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 4.7e-12 Identity = 43/133 (32.33%), Postives = 64/133 (48.12%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 42/134 (31.34%), Postives = 66/134 (49.25%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 7.0e-51 Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48 Identity = 87/136 (63.97%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 4.2e-48 Identity = 85/130 (65.38%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 8.0e-47 Identity = 85/144 (59.03%), Postives = 110/144 (76.39%), Query Frame = 0
BLAST of Bhi04M000740 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 7.5e-37 Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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