
Bhi04M000711 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCTTCAAACGCAAACCAACCTATTCTCTCTCTTGTTTAAGAGCCATAATTTTCTAGTGTTCTCTCTTAGCCACTTACTCTCTCTCTCTCTCTCTCACTATTTTATCTTCTCTCATTTTTCCACCAAAATTCCTCCAAAAAAAAAAAAAAAAAAAAAACCCAAAGAAAAAAAGAAAAAAAGAAAAAAAAAAGAGAAAATTTTGTAATTCCCACACACCCAAATGGAAGCTCCTGAATATTTCCAGATCAATGGGTACTGTTCCCAATTCTCAACGCACTCCTCCTCCGACACCGACACTACCACCGCCACCGCCACTGCCGGACCGGAGCATTTCATCGTGGAAGAGCTTCTGGATTTCTCCAACGACGATGACGGCGTAGTTGGCGACGGTGGAGGATTGTTTTACAATACTAACAATGGGAATAATAATAACAATAATTCAACGGAATCTTCCGCCGTTACGGTGATTGAGAGTTGCAATTCGTCGTCGTTTTCAGGTTGTGAACCAAACTCGTCGTTTTTGGAAGACATTAGTGGCTCTAATTTAGCCGACGCTCATTTCTCCAGCGAACTCTGCGTTCCGGTAATCCCCCCCTCATTTTTCTTCAAAACGATGAGTTTTGCGCTCTCTCTCTTCCCCCCCTTTTTCTTTCATTACCCAACCACCATCACGAACTTTTCTTTTCTGGATTTCTTACCTTTTTTTCCTTTTTCCTTTTTCCTTAATATTTTGTTTTGAAGGATTTTCAATATAATTTTTTTTCTTTTTAATGAGAAAATTTAAATGTTGCATTATATATATATTTTTCGGTGTGTGTTTTCTTTTTTAATTGTAAGCTTAAAGTTTTTACCTTATTTGTATATAAATGATTACTATTTCTTTTTGGTATTGGTCTTTGTTTTTTTCTTTTAAAACAAATATTGGTACTTTGAAAATTAACTTGTTAATAAAATTTGTATTATTAACATATTTGTACGTAGGAAGATGTCACTTGGATACCACTGGAAAGAAGTGGATTCTGTTGATGCTTAGTTAACTTTCACGTGTCTAAGTAGAATTAAGTGATAATTTTGTGTCGTTGAACGTAAATTGCAAATACTACTCTTAAAGTATGGCGATATTGATAATTATAGTCTCAAATTTTTAATTGTAAAAATTAAGTGCTTATGTAAGCGTGTAAATTGAACTCTTAAACTTATATAACTGTAGAAATTATAATAATGGTGTAAGTTTGAAAGTACAATTTTTATCATTTGGAATACAATATCTACAATTATTGTAAATTTGAGAAGTCCAATTTTAACATCAGTAAAAGTTTGAGGATTTAATTTTTATAATTGAAAGTTTGAAAGTGTAATTGCAATTACTATTTTTTTTTCAATTTGCTCTTTTATGTTATTATTAAAGTTTAACAATTATTTATCTGTTTAATATGAAATGGTTGGTTGCAAACTTTTTTATACTTTATAAGTAAAATGGAATACTAAAAGAAAAAAGTAAAATGGTCAATGGATAAAAACCAAATGGAAAATTATCTAAAATGCTAGAAACCCTTTCGTATATTTATTTAGCAATAATTTTTAATAGATATTTAAATACAGTTTTAACGCTCATTTTTAAAATTTATTGTTTTTTTATGGAAAAAAATTATAATTGTTCTTAACGTCAAATAAACCAGTTCATTTTTGTAATTTTCTTAGCAAATTTTTTTTTAAGATAGTAAAAAATAATATTTCAATAATTTTTCGACAAAATTGCAACGGGACAACTCTTTTCTATTTCTTTTTTTTTTTTTTTTAATTCTCTATGTAATGAAATCCTCAAAAACATATGTAATGAATATTATTATTATTATTATTAAAATATTTGTTTTTTATTTTATTTTTTGTACAGTACGACGATTTAGCTGAGTTGGAATGGCTTTCACATTTCGTAGAGGAATCATTTTCCAGTGAGGACATGCAAAAGTTGGAACTAATCTCCGGAGTCAAAGTCAGATCAGACGAACCCACCAATTCCCGACAACCCACCGCCACCCGAAACGCCGCCGCAATTTTCAAACCCGATATCGTTTCGGTTCCGGCAAAAGCCCGTAGCAAACGCTCACGCGCCGTCCCATCCAATTGGAACAACTCCCGCCTCCTTCCTCTTTCTCCAACCACCGAACCCGAAATTACCGCCACAGCCGGACCACCCCACCCCATAAAAAAAAACCCTCCCAAGGCCGCGACAGCCAAGAAGAAGGACAGCCCGGAGGTCGGAGTGTCATCCGGCGAGGGGCGGAAGTGCATGCACTGCGCCACCGACAAGACGCCGCAGTGGCGGACCGGCCCAATGGGCCCGAAAACGCTGTGTAACGCTTGCGGCGTTCGCTACAAATCCGGTCGCCTGGTGCCGGAGTACCGCCCCGCCGCTAGCCCCACCTTCGTTTTAACCAAACACTCCAATTCTCACCGGAAAGTTTTGGAGCTCCGGCGGCAGAAGGAGCTTCTTAGAGCCCAACAACAGCAACAACAACATTTGCTTTTGGATCATCATCAAGATATGATCTTTGATGCATCCAACGGTGATGATTATCTCATTCATCAACATATGGGCCCTGATTTCCGGCAGCTGATCTGACCGCCGCCCGCCGCCGCTAGGGGTAGAGTTCGGCCAATCTGATTCATTTTGGGTTTTTTCCCCCTGAAATTTTTAGATGATTTTGTTCGAAGTTCTAACATTTTGATTTTGATTTTTCTCTTCCCATAGACATTGTTTTTAATTGTCTGGAGAACAAGAAACAAATTACAAATGATGAAAAATAGTTGTTTGATTAATTAAAGAAAACATTAAATCC CCCCTTCAAACGCAAACCAACCTATTCTCTCTCTTGTTTAAGAGCCATAATTTTCTAGTGTTCTCTCTTAGCCACTTACTCTCTCTCTCTCTCTCTCACTATTTTATCTTCTCTCATTTTTCCACCAAAATTCCTCCAAAAAAAAAAAAAAAAAAAAAACCCAAAGAAAAAAAGAAAAAAAGAAAAAAAAAAGAGAAAATTTTGTAATTCCCACACACCCAAATGGAAGCTCCTGAATATTTCCAGATCAATGGGTACTGTTCCCAATTCTCAACGCACTCCTCCTCCGACACCGACACTACCACCGCCACCGCCACTGCCGGACCGGAGCATTTCATCGTGGAAGAGCTTCTGGATTTCTCCAACGACGATGACGGCGTAGTTGGCGACGGTGGAGGATTGTTTTACAATACTAACAATGGGAATAATAATAACAATAATTCAACGGAATCTTCCGCCGTTACGGTGATTGAGAGTTGCAATTCGTCGTCGTTTTCAGGTTGTGAACCAAACTCGTCGTTTTTGGAAGACATTAGTGGCTCTAATTTAGCCGACGCTCATTTCTCCAGCGAACTCTGCGTTCCGTACGACGATTTAGCTGAGTTGGAATGGCTTTCACATTTCGTAGAGGAATCATTTTCCAGTGAGGACATGCAAAAGTTGGAACTAATCTCCGGAGTCAAAGTCAGATCAGACGAACCCACCAATTCCCGACAACCCACCGCCACCCGAAACGCCGCCGCAATTTTCAAACCCGATATCGTTTCGGTTCCGGCAAAAGCCCGTAGCAAACGCTCACGCGCCGTCCCATCCAATTGGAACAACTCCCGCCTCCTTCCTCTTTCTCCAACCACCGAACCCGAAATTACCGCCACAGCCGGACCACCCCACCCCATAAAAAAAAACCCTCCCAAGGCCGCGACAGCCAAGAAGAAGGACAGCCCGGAGGTCGGAGTGTCATCCGGCGAGGGGCGGAAGTGCATGCACTGCGCCACCGACAAGACGCCGCAGTGGCGGACCGGCCCAATGGGCCCGAAAACGCTGTGTAACGCTTGCGGCGTTCGCTACAAATCCGGTCGCCTGGTGCCGGAGTACCGCCCCGCCGCTAGCCCCACCTTCGTTTTAACCAAACACTCCAATTCTCACCGGAAAGTTTTGGAGCTCCGGCGGCAGAAGGAGCTTCTTAGAGCCCAACAACAGCAACAACAACATTTGCTTTTGGATCATCATCAAGATATGATCTTTGATGCATCCAACGGTGATGATTATCTCATTCATCAACATATGGGCCCTGATTTCCGGCAGCTGATCTGACCGCCGCCCGCCGCCGCTAGGGGTAGAGTTCGGCCAATCTGATTCATTTTGGGTTTTTTCCCCCTGAAATTTTTAGATGATTTTGTTCGAAGTTCTAACATTTTGATTTTGATTTTTCTCTTCCCATAGACATTGTTTTTAATTGTCTGGAGAACAAGAAACAAATTACAAATGATGAAAAATAGTTGTTTGATTAATTAAAGAAAACATTAAATCC ATGGAAGCTCCTGAATATTTCCAGATCAATGGGTACTGTTCCCAATTCTCAACGCACTCCTCCTCCGACACCGACACTACCACCGCCACCGCCACTGCCGGACCGGAGCATTTCATCGTGGAAGAGCTTCTGGATTTCTCCAACGACGATGACGGCGTAGTTGGCGACGGTGGAGGATTGTTTTACAATACTAACAATGGGAATAATAATAACAATAATTCAACGGAATCTTCCGCCGTTACGGTGATTGAGAGTTGCAATTCGTCGTCGTTTTCAGGTTGTGAACCAAACTCGTCGTTTTTGGAAGACATTAGTGGCTCTAATTTAGCCGACGCTCATTTCTCCAGCGAACTCTGCGTTCCGTACGACGATTTAGCTGAGTTGGAATGGCTTTCACATTTCGTAGAGGAATCATTTTCCAGTGAGGACATGCAAAAGTTGGAACTAATCTCCGGAGTCAAAGTCAGATCAGACGAACCCACCAATTCCCGACAACCCACCGCCACCCGAAACGCCGCCGCAATTTTCAAACCCGATATCGTTTCGGTTCCGGCAAAAGCCCGTAGCAAACGCTCACGCGCCGTCCCATCCAATTGGAACAACTCCCGCCTCCTTCCTCTTTCTCCAACCACCGAACCCGAAATTACCGCCACAGCCGGACCACCCCACCCCATAAAAAAAAACCCTCCCAAGGCCGCGACAGCCAAGAAGAAGGACAGCCCGGAGGTCGGAGTGTCATCCGGCGAGGGGCGGAAGTGCATGCACTGCGCCACCGACAAGACGCCGCAGTGGCGGACCGGCCCAATGGGCCCGAAAACGCTGTGTAACGCTTGCGGCGTTCGCTACAAATCCGGTCGCCTGGTGCCGGAGTACCGCCCCGCCGCTAGCCCCACCTTCGTTTTAACCAAACACTCCAATTCTCACCGGAAAGTTTTGGAGCTCCGGCGGCAGAAGGAGCTTCTTAGAGCCCAACAACAGCAACAACAACATTTGCTTTTGGATCATCATCAAGATATGATCTTTGATGCATCCAACGGTGATGATTATCTCATTCATCAACATATGGGCCCTGATTTCCGGCAGCTGATCTGA MEAPEYFQINGYCSQFSTHSSSDTDTTTATATAGPEHFIVEELLDFSNDDDGVVGDGGGLFYNTNNGNNNNNNSTESSAVTVIESCNSSSFSGCEPNSSFLEDISGSNLADAHFSSELCVPYDDLAELEWLSHFVEESFSSEDMQKLELISGVKVRSDEPTNSRQPTATRNAAAIFKPDIVSVPAKARSKRSRAVPSNWNNSRLLPLSPTTEPEITATAGPPHPIKKNPPKAATAKKKDSPEVGVSSGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELLRAQQQQQQHLLLDHHQDMIFDASNGDDYLIHQHMGPDFRQLI Homology
BLAST of Bhi04M000711 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 ) HSP 1 Score: 268.1 bits (684), Expect = 1.0e-71 Identity = 178/355 (50.14%), Postives = 209/355 (58.87%), Query Frame = 0
BLAST of Bhi04M000711 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 ) HSP 1 Score: 232.6 bits (592), Expect = 4.9e-61 Identity = 160/345 (46.38%), Postives = 209/345 (60.58%), Query Frame = 0
BLAST of Bhi04M000711 vs. TAIR 10
Match: AT2G45050.1 (GATA transcription factor 2 ) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-43 Identity = 125/304 (41.12%), Postives = 156/304 (51.32%), Query Frame = 0
BLAST of Bhi04M000711 vs. TAIR 10
Match: AT3G60530.1 (GATA transcription factor 4 ) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-43 Identity = 124/291 (42.61%), Postives = 161/291 (55.33%), Query Frame = 0
BLAST of Bhi04M000711 vs. TAIR 10
Match: AT5G66320.1 (GATA transcription factor 5 ) HSP 1 Score: 148.7 bits (374), Expect = 9.2e-36 Identity = 121/315 (38.41%), Postives = 154/315 (48.89%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.5e-70 Identity = 178/355 (50.14%), Postives = 209/355 (58.87%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 6.8e-60 Identity = 160/345 (46.38%), Postives = 209/345 (60.58%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.2e-42 Identity = 125/304 (41.12%), Postives = 156/304 (51.32%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy Swiss-Prot
Match: O49743 (GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.2e-42 Identity = 124/291 (42.61%), Postives = 161/291 (55.33%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy Swiss-Prot
Match: Q9FH57 (GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.3e-34 Identity = 121/315 (38.41%), Postives = 154/315 (48.89%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy TrEMBL
Match: A0A5A7VCX1 (GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003790 PE=3 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 3.1e-156 Identity = 303/376 (80.59%), Postives = 322/376 (85.64%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy TrEMBL
Match: A0A1S3BBN7 (GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103488171 PE=3 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 3.1e-156 Identity = 303/376 (80.59%), Postives = 322/376 (85.64%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy TrEMBL
Match: A0A0A0LPR5 (GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_2G373450 PE=3 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 3.4e-155 Identity = 306/383 (79.90%), Postives = 322/383 (84.07%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy TrEMBL
Match: A0A6J1BSX6 (GATA transcription factor OS=Momordica charantia OX=3673 GN=LOC111005058 PE=3 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 2.2e-133 Identity = 284/379 (74.93%), Postives = 303/379 (79.95%), Query Frame = 0
BLAST of Bhi04M000711 vs. ExPASy TrEMBL
Match: A0A6J1KNT0 (GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111496245 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 3.0e-127 Identity = 257/381 (67.45%), Postives = 293/381 (76.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|