Tan0022762 (gene) Snake gourd v1

Overview
NameTan0022762
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L12-like
LocationLG08: 71159606 .. 71160682 (+)
RNA-Seq ExpressionTan0022762
SyntenyTan0022762
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCGTTGTATCAGCCATTTCAAAAACCCTAGCATAAATCAACTGAAATCCACGCCATTTTCTCTTCGCCGCTCTGCTAGGTTAACCAGTGGCTGTATCTTCCTTCTGTGGAATCTCTTGAATCCACTGACCTTCACGCCGCCGAATCATGCCTCCGAAGTTCGACCCAACTCAGGTGGTGGATGTGTTCGTTCGCGTCACCGGAGGTGAGGTCGGAGCCGCCAGTTCTCTCGCTCCGAAGATCGGTCCTCTCGGTCTTTCCCCTAAGAAGATCGGAGAAGACATTGCTAAAGAGACCGCAAAGGAATGGAAAGGTCTTAGGGTTACTGTAAAGCTCACCGTCCAAAATCGTCAGGCCAAGGTCTCCGTCGTACCCTCGGCGGCGGCTTTGGTAATTAAGGCCTTGAAGGAGCCGGAGCGTGACCGGAAGAAAACTAAAAATATCAAGCACAATGGGAACATCTCTCTTGATGATGTTATTGAGATTGCTAGGATTATGCGGCCCAGATCGATGGCTAAGGACCTCTCTGGCTCCGTCAAGGAGATCCTTGGAACCTGCGTCTCTGTTGGTTGTACTGTTGATGGCAAGGACCCTAAGGATCTTCAACAGGAGATTACTGATGGCGACGTTGAAGTCCCCCAAGATTGAGAGTAAAAGTTTCTTTGGCCACTCCTTTAGAATGAGAGATATTGAATTTACTACATCTTTGTTTTATCAGTTTTGCTATTTAACGTAAGTTTTAGGGTGGTTCTTCTATCTCTTGTTTATCTGCGCTTTTTGTTGGTTTTTTCTTAAAGCTTGAATTGGATTATTGCAATGAATATCAAAGCTTTATTTCTGTTCTGTCATTGGTGCAAGGACTGCTTTGAGATTATCTGGATAGATTTTTTATTTTTATCTAACACTTGCCTAATTGTTTTCTCCTGCTCAGCAATTGCTTGTCTTTATCTTTGGGGGGAATTTCTATGATTTGTTAGACACTTCCATTTCATCTTTGTTCAATTTTGGTTTCTTAGATATCAGTTTGTATATTCGTGTATCTATCATGTCTCTTGCTTACCCTTGCGTTGAAAATT

mRNA sequence

CGTCGTTGTATCAGCCATTTCAAAAACCCTAGCATAAATCAACTGAAATCCACGCCATTTTCTCTTCGCCGCTCTGCTAGGTTAACCAGTGGCTGTATCTTCCTTCTGTGGAATCTCTTGAATCCACTGACCTTCACGCCGCCGAATCATGCCTCCGAAGTTCGACCCAACTCAGGTGGTGGATGTGTTCGTTCGCGTCACCGGAGGTGAGGTCGGAGCCGCCAGTTCTCTCGCTCCGAAGATCGGTCCTCTCGGTCTTTCCCCTAAGAAGATCGGAGAAGACATTGCTAAAGAGACCGCAAAGGAATGGAAAGGTCTTAGGGTTACTGTAAAGCTCACCGTCCAAAATCGTCAGGCCAAGGTCTCCGTCGTACCCTCGGCGGCGGCTTTGGTAATTAAGGCCTTGAAGGAGCCGGAGCGTGACCGGAAGAAAACTAAAAATATCAAGCACAATGGGAACATCTCTCTTGATGATGTTATTGAGATTGCTAGGATTATGCGGCCCAGATCGATGGCTAAGGACCTCTCTGGCTCCGTCAAGGAGATCCTTGGAACCTGCGTCTCTGTTGGTTGTACTGTTGATGGCAAGGACCCTAAGGATCTTCAACAGGAGATTACTGATGGCGACGTTGAAGTCCCCCAAGATTGAGAGTAAAAGTTTCTTTGGCCACTCCTTTAGAATGAGAGATATTGAATTTACTACATCTTTGTTTTATCAGTTTTGCTATTTAACGTAAGTTTTAGGGTGGTTCTTCTATCTCTTGTTTATCTGCGCTTTTTGTTGGTTTTTTCTTAAAGCTTGAATTGGATTATTGCAATGAATATCAAAGCTTTATTTCTGTTCTGTCATTGGTGCAAGGACTGCTTTGAGATTATCTGGATAGATTTTTTATTTTTATCTAACACTTGCCTAATTGTTTTCTCCTGCTCAGCAATTGCTTGTCTTTATCTTTGGGGGGAATTTCTATGATTTGTTAGACACTTCCATTTCATCTTTGTTCAATTTTGGTTTCTTAGATATCAGTTTGTATATTCGTGTATCTATCATGTCTCTTGCTTACCCTTGCGTTGAAAATT

Coding sequence (CDS)

ATGCCTCCGAAGTTCGACCCAACTCAGGTGGTGGATGTGTTCGTTCGCGTCACCGGAGGTGAGGTCGGAGCCGCCAGTTCTCTCGCTCCGAAGATCGGTCCTCTCGGTCTTTCCCCTAAGAAGATCGGAGAAGACATTGCTAAAGAGACCGCAAAGGAATGGAAAGGTCTTAGGGTTACTGTAAAGCTCACCGTCCAAAATCGTCAGGCCAAGGTCTCCGTCGTACCCTCGGCGGCGGCTTTGGTAATTAAGGCCTTGAAGGAGCCGGAGCGTGACCGGAAGAAAACTAAAAATATCAAGCACAATGGGAACATCTCTCTTGATGATGTTATTGAGATTGCTAGGATTATGCGGCCCAGATCGATGGCTAAGGACCTCTCTGGCTCCGTCAAGGAGATCCTTGGAACCTGCGTCTCTGTTGGTTGTACTGTTGATGGCAAGGACCCTAAGGATCTTCAACAGGAGATTACTGATGGCGACGTTGAAGTCCCCCAAGATTGA

Protein sequence

MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPRSMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD
Homology
[Close]
BLAST of Tan0022762 vs. ExPASy Swiss-Prot
Match: P50883 (60S ribosomal protein L12-1 OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79
Identity = 147/166 (88.55%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIARIMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+V+EILGTCVSVGCTVDGKDPKD+QQEI DG+VE+P++
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPEN 166

[Close]
BLAST of Tan0022762 vs. ExPASy Swiss-Prot
Match: Q9FF52 (60S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.1e-79
Identity = 146/166 (87.95%), Postives = 160/166 (96.39%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDVIEIA+IMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+VKEILGTCVSVGCTVDGKDPKDLQ+EI  GD+++P +
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]
BLAST of Tan0022762 vs. ExPASy Swiss-Prot
Match: O50003 (60S ribosomal protein L12 OS=Prunus armeniaca OX=36596 GN=RPL12 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.1e-79
Identity = 150/166 (90.36%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA +WKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH+G+ISLDDVIEIA+IM+ R
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAK+L+G+VKEIL TCVSVGCTVDGKDPKDLQQEI DGDVE+P D
Sbjct: 121 SMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166

[Close]
BLAST of Tan0022762 vs. ExPASy Swiss-Prot
Match: Q9LFH5 (60S ribosomal protein L12-2 OS=Arabidopsis thaliana OX=3702 GN=RPL12B PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.7e-79
Identity = 146/166 (87.95%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIARIMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+V+EILGTCVSVGCTVDGKDPKDLQQEI +G++E+P++
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN 166

[Close]
BLAST of Tan0022762 vs. ExPASy Swiss-Prot
Match: P0CT83 (60S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1201 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.7e-64
Identity = 120/166 (72.29%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP +V  +F+R  GGEV   S+LAPKIGPLGLSPKK+GEDIAK T K+WKGLRVT
Sbjct: 1   MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLT+QNRQA VSVVPSA+ALVIKALKEP RDRKK KN+ H+GN+SLD++IE+AR MR +
Sbjct: 61  VKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFK 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+VKEILGT  SVGCTVDGK+P D+Q+EI +G++E+PQ+
Sbjct: 121 SLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165

[Close]
BLAST of Tan0022762 vs. NCBI nr
Match: XP_038883892.1 (60S ribosomal protein L12-1-like [Benincasa hispida])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE+PQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. NCBI nr
Match: XP_022935531.1 (60S ribosomal protein L12-1-like [Cucurbita moschata] >XP_022983536.1 60S ribosomal protein L12-1-like [Cucurbita maxima] >XP_038903166.1 60S ribosomal protein L12-1 [Benincasa hispida] >KAG6580604.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017359.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEI+DGDVE+PQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. NCBI nr
Match: XP_022950157.1 (60S ribosomal protein L12-3 [Cucurbita moschata] >XP_023005871.1 60S ribosomal protein L12-3 [Cucurbita maxima] >XP_023540179.1 60S ribosomal protein L12-3 [Cucurbita pepo subsp. pepo] >KAG6596472.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028017.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEVPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEVPQD 166

[Close]
BLAST of Tan0022762 vs. NCBI nr
Match: KAF7804454.1 (60S ribosomal protein L12 [Senna tora])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 161/166 (96.99%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAK+WKGLRVT
Sbjct: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIA++MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSG+VKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE+PQD
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. NCBI nr
Match: XP_022143990.1 (60S ribosomal protein L12-like [Momordica charantia])

HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDL G+VKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE+PQD
Sbjct: 121 SMAKDLGGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. ExPASy TrEMBL
Match: A0A6J1KW77 (60S ribosomal protein L12-3 OS=Cucurbita maxima OX=3661 GN=LOC111498745 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEVPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEVPQD 166

[Close]
BLAST of Tan0022762 vs. ExPASy TrEMBL
Match: A0A6J1J2K8 (60S ribosomal protein L12-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482107 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEI+DGDVE+PQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. ExPASy TrEMBL
Match: A0A6J1GE12 (60S ribosomal protein L12-3 OS=Cucurbita moschata OX=3662 GN=LOC111453329 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEVPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEVPQD 166

[Close]
BLAST of Tan0022762 vs. ExPASy TrEMBL
Match: A0A6J1F4X7 (60S ribosomal protein L12-1-like OS=Cucurbita moschata OX=3662 GN=LOC111442375 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEI+DGDVE+PQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. ExPASy TrEMBL
Match: A0A6J1CQD9 (60S ribosomal protein L12-like OS=Momordica charantia OX=3673 GN=LOC111013771 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP+QVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           SMAKDL G+VKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE+PQD
Sbjct: 121 SMAKDLGGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 166

[Close]
BLAST of Tan0022762 vs. TAIR 10
Match: AT2G37190.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-80
Identity = 147/166 (88.55%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIARIMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+V+EILGTCVSVGCTVDGKDPKD+QQEI DG+VE+P++
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPEN 166

[Close]
BLAST of Tan0022762 vs. TAIR 10
Match: AT5G60670.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 295.0 bits (754), Expect = 3.7e-80
Identity = 146/166 (87.95%), Postives = 160/166 (96.39%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDVIEIA+IMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+VKEILGTCVSVGCTVDGKDPKDLQ+EI  GD+++P +
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]
BLAST of Tan0022762 vs. TAIR 10
Match: AT3G53430.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 294.7 bits (753), Expect = 4.8e-80
Identity = 146/166 (87.95%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MPPKFDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIARIMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120

Query: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPQD 167
           S+AK+LSG+V+EILGTCVSVGCTVDGKDPKDLQQEI +G++E+P++
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN 166

The following BLAST results are available for this feature:
BLAST of Tan0022762 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P508833.0e-7988.5560S ribosomal protein L12-1 OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=2[more]
Q9FF525.1e-7987.9560S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1[more]
O500035.1e-7990.3660S ribosomal protein L12 OS=Prunus armeniaca OX=36596 GN=RPL12 PE=2 SV=1[more]
Q9LFH56.7e-7987.9560S ribosomal protein L12-2 OS=Arabidopsis thaliana OX=3702 GN=RPL12B PE=1 SV=1[more]
P0CT834.7e-6472.2960S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484... [more]
BLAST of Tan0022762 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883892.11.1e-8398.1960S ribosomal protein L12-1-like [Benincasa hispida][more]
XP_022935531.13.3e-8397.5960S ribosomal protein L12-1-like [Cucurbita moschata] >XP_022983536.1 60S riboso... [more]
XP_022950157.13.3e-8398.1960S ribosomal protein L12-3 [Cucurbita moschata] >XP_023005871.1 60S ribosomal p... [more]
KAF7804454.14.3e-8396.9960S ribosomal protein L12 [Senna tora][more]
XP_022143990.17.4e-8396.9960S ribosomal protein L12-like [Momordica charantia][more]
BLAST of Tan0022762 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KW771.6e-8398.1960S ribosomal protein L12-3 OS=Cucurbita maxima OX=3661 GN=LOC111498745 PE=3 SV=... [more]
A0A6J1J2K81.6e-8397.5960S ribosomal protein L12-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482107 PE=... [more]
A0A6J1GE121.6e-8398.1960S ribosomal protein L12-3 OS=Cucurbita moschata OX=3662 GN=LOC111453329 PE=3 S... [more]
A0A6J1F4X71.6e-8397.5960S ribosomal protein L12-1-like OS=Cucurbita moschata OX=3662 GN=LOC111442375 P... [more]
A0A6J1CQD93.6e-8396.9960S ribosomal protein L12-like OS=Momordica charantia OX=3673 GN=LOC111013771 PE... [more]
BLAST of Tan0022762 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37190.12.1e-8088.55Ribosomal protein L11 family protein [more]
AT5G60670.13.7e-8087.95Ribosomal protein L11 family protein [more]
AT3G53430.14.8e-8087.95Ribosomal protein L11 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 13..145
e-value: 8.0E-57
score: 204.8
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 1..166
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 9..146
score: 15.620409
IPR000911Ribosomal protein L11/L12CDDcd00349Ribosomal_L11coord: 13..144
e-value: 4.4743E-52
score: 160.309
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 1..81
e-value: 2.3E-35
score: 122.5
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 1..87
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 12..70
e-value: 1.6E-19
score: 69.5
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 82..164
e-value: 6.1E-41
score: 140.5
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 76..149
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 75..144
e-value: 1.9E-16
score: 60.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..166
NoneNo IPR availablePANTHERPTHR11661:SF2760S RIBOSOMAL PROTEIN L12coord: 1..166
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 131..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022762.1Tan0022762.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0070180 large ribosomal subunit rRNA binding
molecular_function GO:0003735 structural constituent of ribosome