Tan0022339 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCGAGCGTACTGGAGACGATCGGCGTCGAGATCATCGGCGTCATGTCTCCGGTTTCAATCTGTATGCTTCTCGTCGTTTTATTGGTCTATTCCCTCTCCTCCGCCGATCCTCTCGCCTCCGCCCCGATTCGCACCGCCGCCAATCTCGTCTACCTCGAGAGCCCTTCCGATTCCGCCGCTCAGAAGCTCGAAGGTGCTCTTCTCAATGCCTTGGTCTTCGTCATCCTCATTGCCGTTGTTACTTTCCTTCTCGTTGTTCTTTATTACTACAACTTTACCAATTTCTTGAAGAATTATATGCGATTCTCTGCGTTTTTCGTTCTTGGTTCCATGGGAGGCTCCATCTTCTTGTCTATCATCCAACATTTTTCGATACCTGTTGATTCGATTACTTGTTTGATCTTACTGTTTAACTTTACGGTGGTGGGAGTGTTGGCGGTGTTCTCTGGAGGAATCCCTATTATTATGAGGCAATCGTATATGGTGTTTTTGGGGATAATTGTAGCTGCTTGGTTCACGAAGCTGCCTGAGTGGACTACTTGGAGTTTGCTTGTAGCCTTGGCTCTTTATGATTTGGTCGCTGTTTTAGCACCTGGTGGACCTCTTAAGCTGTTGGTGGAGTTGGCCTCGAGCAGGGATGAAGAGCTTCCAGCTCTGGTTTATGAGGCTCGACCTACCGTGTCGAGGGGTCCGGAGAATCGTGGGGGATTGGGACTATTGGTTGCTGGGGTCTCAGATTCTGGATCAATAGAGCTTCAGGCAGTTCCAGATAACAATTTGAACCGTAATGGGAATGCAAACCTTCGTAATTCTGATCGTTCTGCTGCTGACAATCAGAATTTTCGGGACGAAGAGGTTGAAAGAAATGGAGATGAAGGGGAGAGGTCGCCTTTAGTAGGTTACTTGAGAGAAAGACACTCATCAGATAGTGGATCATCTGGTTATTCAACTTCAACTGGAGTTCTTTCTCCAGAAATGAGACGGCACTTTGGCAACAGAGAAACTGGAATCCTTATGGATGAGGAAATGTCTCCTTTTGTTGAATTGCCTCGATTGCGAAACCAGATGGAAACTACAAGGGCTGCCCATACCGAGGTTACGAGTAGAGGTATTAGGCTTGGTCTCGGGGACTTTGTGTTCTACAGTGTCCTCGTGGGTAGAGCTGCAATGTATGATCTTATGACAGTATATGCTTGTTATCTTGCAATCATCTCAGGACTTGGATGCACTCTCATTTTGTTATCAGTTTGTCATCGAGCTCTGCCTGCACTTCCCATATCTATCACTTTGGGTGTCATGTTTTACTTCTTGACTCGGTTAGTTATGGAACCGTTTGTTGTAGGGGCTGCCACAAATTTAATGATGTTCTGATTCTTCATTTTTTGCCCAGAGTTTAAATCCCGTTTTAGAGAAAGGTGGTGATTTTCATAGGCACTGGATTTAATGACAGTGCAAACACATATATTCATATAGGAGTTCCTTTTCTCCTTGTGCATCTGTAAGTGTTTTGATGGTAGATTTTAAGCTCAGTAATGCTTACAGGTCACCATATCTAAATTGTTTAGAGAAACTGTCATCATAGTGATTTTTCATGTTCTCAATTAGATTTCAATTACTCTTTCTTCTGTACTACTTGTATTCTTTGCATATTTGTGTCTCGTTCTGTCCACACAAAATTGAGACAGGGCTTAATCTCAAATTCACGTGCTATTTTTATGTTTGGCTGAGCGAAAGGGGAAGGAATAGAAAATAATGGGGTGAGTCTGTTGAAATTGCTTTTGAATGCCTATTTTTCCTAGACATGAGTAGCAAAAATTACATAACTGACTACCATCTTGGGGCTCCACTGGTTTTTTCTTTTCTTTTTTTTTTAATTTTAATTTTGTGGATGGGAACCAAATATTTAATTGATATGATGAAATATACAAAAGAGGGGGAGATTCCACGGAGGGAGAGTTACAAAAAGGCCCTCCAGCTCATCAAAAGTTCACTTAGAACATAGTTTGTAAAAGGGGTGAAAAAAACATTTACACCTAGATAAGGCCATAACCAAAACATCATCAAGTAATTTGTGGAAAGCCTGCAATTTTCTAGCAAAATCGCATGAGATAAACAAGTGTCCCTGTGTTTCTGCTTCTTTACAGCACATTTACACCAGCTGGGGAAATGGTTAGGTGAGGCTGCTTTCTTTGAAAAACATCTTTGAGTATTAATGGCTTTGTTGCTGAGCTCCCAACAAAAAGAATTATCTTCCTGGGATATTTGTCTTTCCACATTCTATTGTAAAAAGAGCTAATGTGAGGGTCAGAAGACCTTGCGAGCTCCTTGATCATGAATTTGACAGAAAAACAGTTTGTGGATTCGTGGGGCCATGTCCATCTATCTTCTGAGGAGGAGGAGATGTTGAGCTGCTTTTGTGAAAAGATGTGTCATTCGGTTAATTCTTCCTACGGGTTACTAGCAACTTCATCAGAGATTTTATTGTCAATGACTTGATATAGAGTAGTATCCTCTTGTGTAACTTTTCTGTTCTCATCGGTGAAAGTAGTGTAATGAGCTGCCTTGTAGATTAGGTTGTTGCCTAGAATGACTTGTTTTTTTTTTAACCACCATGGGTTGGCGTAGTGGTCAATAAGGATCGAGAAGGGTCCAAGTTAGGTGAATGTAGGAGAGTTAGGCAACTGTCCCATAAGAATAGTCGAAGTGCGTGCGACCTGACCTGAATAGGCAGTTGTTATCTTTAATCAACCATTTCCGTTTCAACCCTCATCGGCGGGATGATCGTCTCTGGACTCCTTCCCCATCTAGGCTTTTCTTGTAGCTCCTTTTTTCAGCATCTTGTTTTTCACTAGGGGTTGGGTGGTTCCTCTTTCTCCTCTCTCTGGAAGATTAAGGTCCCGAAGAAGGTTAAGTTTTTTGTTTGACAGGTTTGGCACGGAAGGATTAACACCTTAGATCGGTTGATGGCCAGGGGGTTCCCTCCGTCAGGTTCTTTCGTTTGCATTTTGTGCAGGAGAGCAGCTGAAAACCTTGATCATTTACTGTGGTCGTGTGATTTTGCGAGGGAGGTATGGAGTCATTTCTTCCAGCAGTTCAATTTCAGTTACGTGGGTTATCTGAATAGCCGAGTGATGTTCACGAAACTTCTCACTGGGCTGCCATTTCGTAGGACAGGGTTATTTTTGTGGCATGCTAGAGTGTGTGCTATTTTGTGGGGTTGTGGAGGGAGAGAAATAATAGAATCTTTCGAGATTCTACGTTTCTCTTTGGGCCTCGGTGTCGAGGACTTTTTGTAATTATTCTCTTAGTCTTATTTTACTTGATTGGAGCCCTTTTTTATAGTGGGCTTCCTTTTGTGGGCTTCTTTTTTTGTATGCCCATGTATTTTTTTCATTCTTCTCAATGAAGGCTTGGTTTCCTCATCAAAAAAATAAAAATAAAAATAAAAATGACTTCTTTTTCTCAAGCTCGAGTTGGTTTAACCCACACCAACATCAAGGAAGTAAAGGAGTAGGATTGTTTTCCGGAGAAATGGAACTTAAATCCCAAATAACAATTAAGAATAGGCTCTGGGTAACTTTTAAACATTAAAGATTATTATGTATTTGAAATTATCATTTTTAGTCTATGATTTTCCATAGGAATCAACTTGTAAAAATAGTTGCAAGTGTGTTACCACTGAAATTTTGTTTAATATACTCCCAAACAGTCAACTTACAGCTAGATTGATTTCTTTGTAGGATTTTAGTTCCACTTCGTCCAAAGTTTAGGACATCATATAATTGGTTCCAAAATAGCATTATTTGTCTATGCAACGTCACTTCACATGTCTGTGAAAAGTGAAACCTTCTATTGCACAACTGGAAAATTTTGTTGATAGTAATGACTCATTTTTCTGCAGTTTCTTGGAGAGTTGTCTATTTATTGAGTATTGAATGTGCAAAACTCCGTTTTCATCCTTTATCATGGCTTGTAGTAGAATATGAGTAGGCATGGATGTTCTTATCTTTTTCTTTTAAAATGGTATCAACTCTCTCCATCATTCGGGACATTCCTATATTTGCTTTTACTGAGGAAAGAGGATATTGGCGACTGGACTTATTTTCAGCTTGGTATAGAATCTTTTTCTGGTTCTTTTGTTCTTTTTTGGTTGTTGAATCCTGTTTCTTGCTACATGGTGTTTTGGACCCTTCTACATTCATTCATTCTTCTCACTGACGTTTCTGTTCTTTAAAAGAAAGTCTTTTGAAACTCAGAAACTTACAAGAAGAAGTTTGCTTCTAAATACATGTGCTGTTATAACTGTTGTTATTTTCAGTCATTCCCTGATTGTTTAGACATTGTTGGTACTGTTTCTATTGCTGTTAGTTTCCTCCTAAAACTGCTGGTATGTGTTAATTTGTGAATAAATATTACAGCTGACAGAAAGTGGATAATCACATTTGGGGAACTTCTTGTACGGCTGGATTCTTCTACTTTTCACAAATTCTCTTCATCAGGTTTGTTTCTTTTCATATTTTCTCACCATTATTACTTACCTTAGCTGCTATTATGGGGAATATAATGGTAGATTACGGGTGATGTGAAATACCAAAAGTTAATTAATTTAGGGTTCAAAATTATATTTTCCGTCCATATAGTTTACCACATGGTGTTATAGATTCACCTGCGAGAGGCGGGTAGCCTAATCTGGTTCGGGCTTCCCGATCCTGTCAAGGGAGATGCCAACCATCTCTCCTTTAATTGAACACCACTTGGTCCTTTTAAAGTGCTATGTGCAGCAAACTGACATTTAGAAGCAACGTATCAAATTTCTTTTTTAAGGCCTGTCATGTTTTATCATTAACAGTGGGTGCTATACGGAATCACAATTGCATAAACAAGCTCTGTAATTTAATTTATGCAT ATGGAATCGAGCGTACTGGAGACGATCGGCGTCGAGATCATCGGCGTCATGTCTCCGGTTTCAATCTGTATGCTTCTCGTCGTTTTATTGGTCTATTCCCTCTCCTCCGCCGATCCTCTCGCCTCCGCCCCGATTCGCACCGCCGCCAATCTCGTCTACCTCGAGAGCCCTTCCGATTCCGCCGCTCAGAAGCTCGAAGGTGCTCTTCTCAATGCCTTGGTCTTCGTCATCCTCATTGCCGTTGTTACTTTCCTTCTCGTTGTTCTTTATTACTACAACTTTACCAATTTCTTGAAGAATTATATGCGATTCTCTGCGTTTTTCGTTCTTGGTTCCATGGGAGGCTCCATCTTCTTGTCTATCATCCAACATTTTTCGATACCTGTTGATTCGATTACTTGTTTGATCTTACTGTTTAACTTTACGGTGGTGGGAGTGTTGGCGGTGTTCTCTGGAGGAATCCCTATTATTATGAGGCAATCGTATATGGTGTTTTTGGGGATAATTGTAGCTGCTTGGTTCACGAAGCTGCCTGAGTGGACTACTTGGAGTTTGCTTGTAGCCTTGGCTCTTTATGATTTGGTCGCTGTTTTAGCACCTGGTGGACCTCTTAAGCTGTTGGTGGAGTTGGCCTCGAGCAGGGATGAAGAGCTTCCAGCTCTGGTTTATGAGGCTCGACCTACCGTGTCGAGGGGTCCGGAGAATCGTGGGGGATTGGGACTATTGGTTGCTGGGGTCTCAGATTCTGGATCAATAGAGCTTCAGGCAGTTCCAGATAACAATTTGAACCGTAATGGGAATGCAAACCTTCGTAATTCTGATCGTTCTGCTGCTGACAATCAGAATTTTCGGGACGAAGAGGTTGAAAGAAATGGAGATGAAGGGGAGAGGTCGCCTTTAGTAGGTTACTTGAGAGAAAGACACTCATCAGATAGTGGATCATCTGGTTATTCAACTTCAACTGGAGTTCTTTCTCCAGAAATGAGACGGCACTTTGGCAACAGAGAAACTGGAATCCTTATGGATGAGGAAATGTCTCCTTTTGTTGAATTGCCTCGATTGCGAAACCAGATGGAAACTACAAGGGCTGCCCATACCGAGGTTACGAGTAGAGCTGACAGAAAGTGGATAATCACATTTGGGGAACTTCTTGTACGGCTGGATTCTTCTACTTTTCACAAATTCTCTTCATCAGGTTTGTTTCTTTTCATATTTTCTCACCATTATTACTTACCTTAGCTGCTATTATGGGGAATATAATGGTAGATTACGGGTGATGTGAAATACCAAAAGTTAATTAATTTAGGGTTCAAAATTATATTTTCCGTCCATATAGTTTACCACATGGTGTTATAGATTCACCTGCGAGAGGCGGGTAGCCTAATCTGGTTCGGGCTTCCCGATCCTGTCAAGGGAGATGCCAACCATCTCTCCTTTAATTGAACACCACTTGGTCCTTTTAAAGTGCTATGTGCAGCAAACTGACATTTAGAAGCAACGTATCAAATTTCTTTTTTAAGGCCTGTCATGTTTTATCATTAACAGTGGGTGCTATACGGAATCACAATTGCATAAACAAGCTCTGTAATTTAATTTATGCAT ATGGAATCGAGCGTACTGGAGACGATCGGCGTCGAGATCATCGGCGTCATGTCTCCGGTTTCAATCTGTATGCTTCTCGTCGTTTTATTGGTCTATTCCCTCTCCTCCGCCGATCCTCTCGCCTCCGCCCCGATTCGCACCGCCGCCAATCTCGTCTACCTCGAGAGCCCTTCCGATTCCGCCGCTCAGAAGCTCGAAGGTGCTCTTCTCAATGCCTTGGTCTTCGTCATCCTCATTGCCGTTGTTACTTTCCTTCTCGTTGTTCTTTATTACTACAACTTTACCAATTTCTTGAAGAATTATATGCGATTCTCTGCGTTTTTCGTTCTTGGTTCCATGGGAGGCTCCATCTTCTTGTCTATCATCCAACATTTTTCGATACCTGTTGATTCGATTACTTGTTTGATCTTACTGTTTAACTTTACGGTGGTGGGAGTGTTGGCGGTGTTCTCTGGAGGAATCCCTATTATTATGAGGCAATCGTATATGGTGTTTTTGGGGATAATTGTAGCTGCTTGGTTCACGAAGCTGCCTGAGTGGACTACTTGGAGTTTGCTTGTAGCCTTGGCTCTTTATGATTTGGTCGCTGTTTTAGCACCTGGTGGACCTCTTAAGCTGTTGGTGGAGTTGGCCTCGAGCAGGGATGAAGAGCTTCCAGCTCTGGTTTATGAGGCTCGACCTACCGTGTCGAGGGGTCCGGAGAATCGTGGGGGATTGGGACTATTGGTTGCTGGGGTCTCAGATTCTGGATCAATAGAGCTTCAGGCAGTTCCAGATAACAATTTGAACCGTAATGGGAATGCAAACCTTCGTAATTCTGATCGTTCTGCTGCTGACAATCAGAATTTTCGGGACGAAGAGGTTGAAAGAAATGGAGATGAAGGGGAGAGGTCGCCTTTAGTAGGTTACTTGAGAGAAAGACACTCATCAGATAGTGGATCATCTGGTTATTCAACTTCAACTGGAGTTCTTTCTCCAGAAATGAGACGGCACTTTGGCAACAGAGAAACTGGAATCCTTATGGATGAGGAAATGTCTCCTTTTGTTGAATTGCCTCGATTGCGAAACCAGATGGAAACTACAAGGGCTGCCCATACCGAGGTTACGAGTAGAGCTGACAGAAAGTGGATAATCACATTTGGGGAACTTCTTGTACGGCTGGATTCTTCTACTTTTCACAAATTCTCTTCATCAGGTTTGTTTCTTTTCATATTTTCTCACCATTATTACTTACCTTAG MESSVLETIGVEIIGVMSPVSICMLLVVLLVYSLSSADPLASAPIRTAANLVYLESPSDSAAQKLEGALLNALVFVILIAVVTFLLVVLYYYNFTNFLKNYMRFSAFFVLGSMGGSIFLSIIQHFSIPVDSITCLILLFNFTVVGVLAVFSGGIPIIMRQSYMVFLGIIVAAWFTKLPEWTTWSLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPTVSRGPENRGGLGLLVAGVSDSGSIELQAVPDNNLNRNGNANLRNSDRSAADNQNFRDEEVERNGDEGERSPLVGYLRERHSSDSGSSGYSTSTGVLSPEMRRHFGNRETGILMDEEMSPFVELPRLRNQMETTRAAHTEVTSRADRKWIITFGELLVRLDSSTFHKFSSSGLFLFIFSHHYYLP Homology
BLAST of Tan0022339 vs. ExPASy Swiss-Prot
Match: O64668 (Presenilin-like protein At1g08700 OS=Arabidopsis thaliana OX=3702 GN=At1g08700 PE=1 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 3.2e-106 Identity = 238/371 (64.15%), Postives = 288/371 (77.63%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy Swiss-Prot
Match: Q9SIK7 (Presenilin-like protein At2g29900 OS=Arabidopsis thaliana OX=3702 GN=At2g29900 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.5e-58 Identity = 139/267 (52.06%), Postives = 179/267 (67.04%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy Swiss-Prot
Match: Q54ET2 (Presenilin-A OS=Dictyostelium discoideum OX=44689 GN=psenA PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.1e-26 Identity = 100/383 (26.11%), Postives = 196/383 (51.17%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy Swiss-Prot
Match: Q54DE8 (Presenilin-B OS=Dictyostelium discoideum OX=44689 GN=psenB PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 9.0e-24 Identity = 88/241 (36.51%), Postives = 134/241 (55.60%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy Swiss-Prot
Match: O02194 (Presenilin homolog OS=Drosophila melanogaster OX=7227 GN=Psn PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 4.5e-23 Identity = 88/280 (31.43%), Postives = 154/280 (55.00%), Query Frame = 0
BLAST of Tan0022339 vs. NCBI nr
Match: XP_022967797.1 (presenilin-like protein At1g08700 [Cucurbita maxima]) HSP 1 Score: 624.0 bits (1608), Expect = 9.1e-175 Identity = 346/374 (92.51%), Postives = 354/374 (94.65%), Query Frame = 0
BLAST of Tan0022339 vs. NCBI nr
Match: XP_038883203.1 (presenilin-like protein At1g08700 [Benincasa hispida] >XP_038883204.1 presenilin-like protein At1g08700 [Benincasa hispida]) HSP 1 Score: 622.5 bits (1604), Expect = 2.7e-174 Identity = 345/374 (92.25%), Postives = 351/374 (93.85%), Query Frame = 0
BLAST of Tan0022339 vs. NCBI nr
Match: XP_023543455.1 (presenilin-like protein At1g08700 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 621.7 bits (1602), Expect = 4.5e-174 Identity = 345/374 (92.25%), Postives = 353/374 (94.39%), Query Frame = 0
BLAST of Tan0022339 vs. NCBI nr
Match: KAG7033620.1 (Presenilin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 617.8 bits (1592), Expect = 6.6e-173 Identity = 342/374 (91.44%), Postives = 352/374 (94.12%), Query Frame = 0
BLAST of Tan0022339 vs. NCBI nr
Match: XP_022950738.1 (presenilin-like protein At1g08700 [Cucurbita moschata] >KAG6603435.1 Presenilin-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 615.9 bits (1587), Expect = 2.5e-172 Identity = 342/374 (91.44%), Postives = 351/374 (93.85%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy TrEMBL
Match: A0A6J1HRT4 (Presenilin OS=Cucurbita maxima OX=3661 GN=LOC111467203 PE=3 SV=1) HSP 1 Score: 624.0 bits (1608), Expect = 4.4e-175 Identity = 346/374 (92.51%), Postives = 354/374 (94.65%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy TrEMBL
Match: A0A6J1GFQ7 (Presenilin OS=Cucurbita moschata OX=3662 GN=LOC111453749 PE=3 SV=1) HSP 1 Score: 615.9 bits (1587), Expect = 1.2e-172 Identity = 342/374 (91.44%), Postives = 351/374 (93.85%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy TrEMBL
Match: A0A5D3CED1 (Presenilin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001120 PE=3 SV=1) HSP 1 Score: 607.1 bits (1564), Expect = 5.6e-170 Identity = 337/374 (90.11%), Postives = 346/374 (92.51%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy TrEMBL
Match: A0A1S3C188 (Presenilin OS=Cucumis melo OX=3656 GN=LOC103495868 PE=3 SV=1) HSP 1 Score: 607.1 bits (1564), Expect = 5.6e-170 Identity = 337/374 (90.11%), Postives = 346/374 (92.51%), Query Frame = 0
BLAST of Tan0022339 vs. ExPASy TrEMBL
Match: A0A1S3C2X4 (Presenilin OS=Cucumis melo OX=3656 GN=LOC103495868 PE=3 SV=1) HSP 1 Score: 607.1 bits (1564), Expect = 5.6e-170 Identity = 337/374 (90.11%), Postives = 346/374 (92.51%), Query Frame = 0
BLAST of Tan0022339 vs. TAIR 10
Match: AT1G08700.1 (Presenilin-1 ) HSP 1 Score: 386.7 bits (992), Expect = 2.3e-107 Identity = 238/371 (64.15%), Postives = 288/371 (77.63%), Query Frame = 0
BLAST of Tan0022339 vs. TAIR 10
Match: AT2G29900.1 (Presenilin-2 ) HSP 1 Score: 228.4 bits (581), Expect = 1.0e-59 Identity = 139/267 (52.06%), Postives = 179/267 (67.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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