Tan0022186 (gene) Snake gourd v1

Overview


Name	Tan0022186
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-CH-type domain-containing protein
Location	LG11: 1928095 .. 1931431 (-)
RNA-Seq Expression	Tan0022186
Synteny	Tan0022186

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGGAAAGGCTCGATGAATTTTTCTTTGTTTTGTACACAATTTGTGATGTAAATTTTGTCTCTAAAAGATTTCTCTTTTCCCTCGAACAATGATTTGGGTGATCACGTTTCTACTTTTTCTTTTGAGTGAAAAAAAATTATAAAAAAAAAAAAGGGAAAAAAGAAGTTCAATGATACTCTGCATAATGCAGTGCAAAAATTGTCTCCTAAATCTTTCTTCGTCTTTTTCCTCTCTGCAACTCTGTTTTAGGCTGCACATCGCCACTGACACCCAACAAAGCCGCTGAAAGAGGGGACACCCACCACACTTACTTCTACTTCTCACTCGATTAGTGATTATCATATCAAAATCAGACCCTAAATCAAAATCATTTTTGTTTATGGGAGTCCTTTGTCTCTGTGGGTATTCATGGTTTTGGCCTCACAGAGCCATTACATGAGGATTCTCTTTCTGGGTCTTTGCGATGACGACGATCGAAAACTCCTGCGTTGTCGCAATGGAAGAAGAGCAAGAAGAACGGCCTCGCCGGGTTTCTAACGCCGGCACTGACGCCTCGCCGGTTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGCGGAGAAAAGAAGGGAATCCTCTGTCTCCGAGTTCTCTGTTGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATGTAAGTTCCCCCCAAATAGAACATGCCTAATTTTTCTTGCCTTCAAGTTTCATTTCCCTTATCAGTTATCTCCTGAGTTTTGTTCATTCAAGTGGTCAATTACATTTCAGTTAATGCGAATCATGTTTCATGCATCGAATGTAATGAATGATATAGTACGAGAATCATGGCTTGAATCTGGAATAAGAACTTTGTTTTCTTGATTCAAACTTGTAGTTCAAATTTCCTTATTCCTTTTGGTGTTTTATATTTTTAGTTTTGTATTCTTTTTTTCTTGTTACTGACTACTCTTGACTGCTACAGTTCTTGGTTTCTTAGTTATGTTAAAGAATTTGGTTTGCAATTGTCTTTGATCGTGTCAAATTAGCCTGCTTTGACTAAAATTGACCGATTCCTTGTCTTCTGTCTTCAAAACACCTTTATCCAAATGCTACACATTTGAGAGTATGTGGTAATCTGGATTTTTGCTTCTTGCTCAATCCATCAGCCCTTTTTTAGGATCCATGTCTTTATTTCGTGTCAAAGAACAAAGCCAGAACGAAAGGTGCTTCTTTCTCAAAACGAAGAGAAGTTGGGTTTTGCTTTGGACGACATGGGAATGAGACGGTGTTTAATCGAGGAGGCTGCAGCTCGTGGCGTGGATGTGTTTCTTGCACAAGAACTTTGACTTCATCTCGTGGAAAAAGGCCCATTTCTTAGCCTAGAAATGCTTTTGCTTGCTTTAGTCTGATGTACCGTTGATTAGAGCCCATATCTCTCAGCTGAGTTCAGATGTTTGAATTCTTTCTCCAATATGTTCTGTCCTTTTTGTTTGACTTTCTGGTCAACTGTAGTGTGAGTTGGACCCAATGGAGTGAGCATTCATAACTCTTGCAATATTTCCTTCATTACTTCATTGCATGATGTTGGTATCTACAAAAGTATATGGAATCAACATTTATTCCAAAAATGGGCAATCAGTGAGATTCTTTCCTTTTTAACCATTCCTTTATCCTAATTTATGACAGAAGACGTTACAAAGATTAGTACAAATATCATGATGCAATATAGAATGGTTTTGTTTTGAGTTTCAAATAGCTTCCTTTGAGGTTTTACTGATATTGGCATCTCTAGAAATTCTACGATCGGCATATCTATCGATATTAATTTCATCTTTAGTTCAAAATGTGTTGAACTTATATGGGACAAAGTTACAGCTTCAGTTCGAGGTAGATTGTAATTTCATTTCACCTCTCTCAAATCACCATCCAAGAATGTGAAGCTAGTTTTGCTCCCGAGTAACTCACGGTAACGAACATGCATCTCTCGTAAAACCTGAGAAACACATTCAAGTTTATAATAGATAAAGATACTATATTTGAACAGGATTATTTTCTCATTCCTTGTACTGCAACCCGGATTAGTATCAGCTATCTAAAATCTCTTTCTGTTTTCATCTTTGTGGTCAAGCTGATTGATGGAAGCTTATTATTTTGGATACAGATCATGGTCAAAAGGGTTCCTAATAACTATCTTCATTGTGCTTATGCATAAGGTGGAAATATTTTTCTGTTCTCTTATTGAACCGCAAAGAATCTAGGAGCATATCGAAAGAATTGAGTTAATATAGTTGGATTTGTCAAGAACTTTATTGCTTTTGATCCTGCTAGCAACCATGTGTAGTTTGGCTAGGAAAATTTTTCATTATTGGAGAGTGATCTGTAGAAAACTTGCTGTCATTCATTTTCTAGAAGAAGATCAGGCAAAAAGCAGATTCTTTTCAAACAGGGAAAAACTTACTGTGTACCTGCGAAATCTGTGTAGTTTCTAACTTGAACTGACCCATCTGCAATTTGTTACAGCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCTGATTCGACCGAGCAGCGCAATGTGTCAAACGATGCAACGACAGCAACCACTGCAGCAGCTGTTGTGGTGCCACCACACTCCACAGAGGCTCAAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTCGCCTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAATGAAAACTAAACCTGAAAGTAAGCATCAAAAGATTGCCAAAAAGCTTCATCCCTCTTCATTCTGCATCGTCCATATCGTGTCGTTACTTTCTCAGGGGGTTGTGATTCGTTACTTTCTCAGGGGTTTGTGATTCGTATACCGATATCCTGTTAATATATATATTAGTGTTAGAGAACCTTGGAAGAAGAGTGGAGTACATGTAATGTTGCTGCCATTGTAAGATGTATAATGAACTGTCTGTAACTTTGTATTGTATTATTGGGGCTTTGTGTTGTTATAGCTTATTGCAACAGACAGATTAGATTGTTGGGCGATGAATTTCTCAATCAGTTGATGTTTGATAAGATGCTGTAACGATTCAGCTAGCTGGATTGGCC

mRNA sequence

GAAAAGGAAAGGCTCGATGAATTTTTCTTTGTTTTGTACACAATTTGTGATGTAAATTTTGTCTCTAAAAGATTTCTCTTTTCCCTCGAACAATGATTTGGGTGATCACGTTTCTACTTTTTCTTTTGAGTGAAAAAAAATTATAAAAAAAAAAAAGGGAAAAAAGAAGTTCAATGATACTCTGCATAATGCAGTGCAAAAATTGTCTCCTAAATCTTTCTTCGTCTTTTTCCTCTCTGCAACTCTGTTTTAGGCTGCACATCGCCACTGACACCCAACAAAGCCGCTGAAAGAGGGGACACCCACCACACTTACTTCTACTTCTCACTCGATTAGTGATTATCATATCAAAATCAGACCCTAAATCAAAATCATTTTTGTTTATGGGAGTCCTTTGTCTCTGTGGGTATTCATGGTTTTGGCCTCACAGAGCCATTACATGAGGATTCTCTTTCTGGGTCTTTGCGATGACGACGATCGAAAACTCCTGCGTTGTCGCAATGGAAGAAGAGCAAGAAGAACGGCCTCGCCGGGTTTCTAACGCCGGCACTGACGCCTCGCCGGTTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGCGGAGAAAAGAAGGGAATCCTCTGTCTCCGAGTTCTCTGTTGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCTGATTCGACCGAGCAGCGCAATGTGTCAAACGATGCAACGACAGCAACCACTGCAGCAGCTGTTGTGGTGCCACCACACTCCACAGAGGCTCAAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTCGCCTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAATGAAAACTAAACCTGAAAGTAAGCATCAAAAGATTGCCAAAAAGCTTCATCCCTCTTCATTCTGCATCGTCCATATCGTGTCGTTACTTTCTCAGGGGGTTGTGATTCGTTACTTTCTCAGGGGTTTGTGATTCGTATACCGATATCCTGTTAATATATATATTAGTGTTAGAGAACCTTGGAAGAAGAGTGGAGTACATGTAATGTTGCTGCCATTGTAAGATGTATAATGAACTGTCTGTAACTTTGTATTGTATTATTGGGGCTTTGTGTTGTTATAGCTTATTGCAACAGACAGATTAGATTGTTGGGCGATGAATTTCTCAATCAGTTGATGTTTGATAAGATGCTGTAACGATTCAGCTAGCTGGATTGGCC

Coding sequence (CDS)

ATGACGACGATCGAAAACTCCTGCGTTGTCGCAATGGAAGAAGAGCAAGAAGAACGGCCTCGCCGGGTTTCTAACGCCGGCACTGACGCCTCGCCGGTTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGCGGAGAAAAGAAGGGAATCCTCTGTCTCCGAGTTCTCTGTTGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCTGATTCGACCGAGCAGCGCAATGTGTCAAACGATGCAACGACAGCAACCACTGCAGCAGCTGTTGTGGTGCCACCACACTCCACAGAGGCTCAAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTCGCCTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAA

Protein sequence

MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRESSVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHSTEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS

Homology

[Close]

BLAST of Tan0022186 vs. NCBI nr
Match: XP_022957596.1 (uncharacterized protein LOC111458938 [Cucurbita moschata])

HSP 1 Score: 380.6 bits (976), Expect = 9.2e-102
Identity = 192/216 (88.89%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           M+TIE++ VVAMEEE+EERP RVS AGT ASP SDDVRRCS QS AEIVGAAA EKRR S
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVEKRRGS 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           SVSE SVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ N SND TTATTAAAVVVPPHS
Sbjct: 121 HKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           TEA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of Tan0022186 vs. NCBI nr
Match: KAG6602635.1 (hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.3 bits (970), Expect = 4.6e-101
Identity = 193/217 (88.94%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAA-EKRRE 60
           M+TIE++ VVAMEEE+EERP RVS AGT ASP SDDVRRCS QS AEIVGAAAA EKRR 
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAAVEKRRG 60

Query: 61  SSVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAA 120
           SSVSE SVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAA
Sbjct: 61  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 120

Query: 121 AHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPH 180
           AHKHCAEAWFK+KGDITCEICGSIAHNVTGT EADSTEQ N SND TTATT AAVVVPPH
Sbjct: 121 AHKHCAEAWFKVKGDITCEICGSIAHNVTGTCEADSTEQCNESNDGTTATTVAAVVVPPH 180

Query: 181 STEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           STEA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 STEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217

[Close]

BLAST of Tan0022186 vs. NCBI nr
Match: XP_022990745.1 (uncharacterized protein LOC111487535 [Cucurbita maxima])

HSP 1 Score: 378.3 bits (970), Expect = 4.6e-101
Identity = 192/216 (88.89%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           M+TI+N+ VVAMEEEQEERP RVS AGTDASP SDDVRRCS QS AEIVG AA EKRR S
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVG-AAVEKRRGS 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           SVSE SVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ N SND TTATTAAAVVVPPHS
Sbjct: 121 HKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           TE +NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Tan0022186 vs. NCBI nr
Match: XP_023524419.1 (uncharacterized protein LOC111788319 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 190/217 (87.56%), Postives = 198/217 (91.24%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAA-AEKRRE 60
           M+TI+N+ VVAMEEEQEERP RVS AGT ASP SDDVRRCS QS AEIVGAAA  EKRR 
Sbjct: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVVEKRRG 78

Query: 61  SSVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAA 120
           SSVSE SVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAA
Sbjct: 79  SSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAA 138

Query: 121 AHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPH 180
           AHKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ N SND TTATTAAAV+VPPH
Sbjct: 139 AHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPPH 198

Query: 181 STEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
             EA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 199 PMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235

[Close]

BLAST of Tan0022186 vs. NCBI nr
Match: XP_022938531.1 (uncharacterized protein LOC111444740 [Cucurbita moschata] >XP_022938532.1 uncharacterized protein LOC111444740 [Cucurbita moschata])

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 189/216 (87.50%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           MTT +NS VVAME  + E+PRR S AG DA   S+DVR+CSGQSRAEIVG AAAEKRRES
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVG-AAAEKRRES 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           SVSE SVEMDLECGLAEIK+HL K+ERDCRICHLSLDASN ESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFKIKGDITCEICGSIAHNVT TYE DSTEQRN SNDATTAT AAAVVVPPHS
Sbjct: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           TEA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Tan0022186 vs. ExPASy TrEMBL
Match: A0A6J1GZN3 (uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC111458938 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.5e-102
Identity = 192/216 (88.89%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           M+TIE++ VVAMEEE+EERP RVS AGT ASP SDDVRRCS QS AEIVGAAA EKRR S
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVEKRRGS 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           SVSE SVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ N SND TTATTAAAVVVPPHS
Sbjct: 121 HKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           TEA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of Tan0022186 vs. ExPASy TrEMBL
Match: A0A6J1JQX9 (uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.2e-101
Identity = 192/216 (88.89%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           M+TI+N+ VVAMEEEQEERP RVS AGTDASP SDDVRRCS QS AEIVG AA EKRR S
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVG-AAVEKRRGS 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           SVSE SVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ N SND TTATTAAAVVVPPHS
Sbjct: 121 HKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           TE +NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Tan0022186 vs. ExPASy TrEMBL
Match: A0A6J1FEB0 (uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC111444740 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 189/216 (87.50%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           MTT +NS VVAME  + E+PRR S AG DA   S+DVR+CSGQSRAEIVG AAAEKRRES
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVG-AAAEKRRES 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           SVSE SVEMDLECGLAEIK+HL K+ERDCRICHLSLDASN ESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFKIKGDITCEICGSIAHNVT TYE DSTEQRN SNDATTAT AAAVVVPPHS
Sbjct: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           TEA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Tan0022186 vs. ExPASy TrEMBL
Match: A0A6J1JXH7 (uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.8e-96
Identity = 186/216 (86.11%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRES 60
           MTT +NS VVAME  + E+P R S AG DA   SDDVR+CSGQSRAEIVG AAAEKRRES
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPSRTSAAGADALLASDDVRQCSGQSRAEIVG-AAAEKRRES 60

Query: 61  SVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAA 120
           S SE SVEMDLECGL+EIKVHL K+ RDCRICHLSLDASN ESGIPIELGCSCKDDLAAA
Sbjct: 61  SASECSVEMDLECGLSEIKVHLTKMGRDCRICHLSLDASNQESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHS 180
           HKHCAEAWFKIKGDITCEICGSIAHNVT TYE DSTEQRN SND TTATTAAAVVVPPHS
Sbjct: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTVTYEPDSTEQRNDSNDETTATTAAAVVVPPHS 180

Query: 181 TEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
            EA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 IEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Tan0022186 vs. ExPASy TrEMBL
Match: A0A0A0K8G0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009420 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.1e-91
Identity = 181/225 (80.44%), Postives = 193/225 (85.78%), Query Frame = 0


Query: 1   MTTIENSCVVAMEEEQ-EERPRRVSNAGTDASPVSDDVRRCSGQSRAEIV--------GA 60
           MTT++ S VVAM+ EQ ++RPR      TD    SDDVRRCS  SRA+I+         A
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPR------TD----SDDVRRCSVHSRADILEEDGVAVAAA 60

Query: 61  AAAEKRRESSVSEFSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGC 120
           AA EKRR SSVSE SVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGC
Sbjct: 61  AAVEKRRGSSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGC 120

Query: 121 SCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTA 180
           SCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRN  N+ATTAT  
Sbjct: 121 SCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATAT 180

Query: 181 AAVVVPPHSTEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217
           AA+V+PPHSTEA+NFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 AAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Tan0022186 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 215.3 bits (547), Expect = 4.8e-56
Identity = 115/195 (58.97%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 24  SNAGTDASPVSDDVRRCSG--QSRAEIVGAAAAEKRRESSVSEFSVEMDLECGLAEIKVH 83
           S++G D      + RR SG  +   EIV     ++ R S+ S  SVE+DLE GL E  VH
Sbjct: 19  SSSGCDG---DGEPRRSSGAVEKEEEIV----KDEERRSNASVCSVEIDLELGLPEKVVH 78

Query: 84  LAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICG 143
           L++ ERDCRICH+SLDA+N ESG+PIELGCSCK DLAAAHKHCAE WFKIKG+  CE+CG
Sbjct: 79  LSQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCG 138

Query: 144 SIAHNVTGTYEADSTEQRNVSNDATTATTAAAVVVPPHSTEAQNFWQGHRFLNFLLACMV 203
           SIA NV G+ E +S E RN +N     T   +    P   E ++FWQGHRFLNFLLACMV
Sbjct: 139 SIAGNVVGSVEVESEESRNEANGVENLTLRTS---GPRLVEGRSFWQGHRFLNFLLACMV 198

Query: 204 FAFVISWLFHFKIPS 217
           FAFVISWLFHF +PS
Sbjct: 199 FAFVISWLFHFNVPS 203

[Close]

BLAST of Tan0022186 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.7e-33
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 86  ERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 145
           E+DCRICHL L++S HE G P+ LGCSCKDDL   HK CA+ WFKIKG+ TCEIC SIA 
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 146 NV--TGTYEADSTEQRNVSNDATTATTAAAVVVPPHSTEAQNFWQGHRFLNFLLACMVFA 205
           N          +T + NV +D     T    +V    ++ +   +G+RFLNFLL CMV A
Sbjct: 135 NFFKVDNEIGQTTVETNV-DDVEAGNT--PTMVATSDSDDRRLCRGNRFLNFLLTCMVCA 194

Query: 206 FVISWLFHFKIPS 217
           FVISW FHF +PS
Sbjct: 195 FVISWFFHFNLPS 204

[Close]

BLAST of Tan0022186 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 70/133 (52.63%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 86  ERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 145
           E+DCRICHL ++ S    G  IELGCSCKDDLA AH+ CAE WFKIKGD TCEIC S+A 
Sbjct: 81  EKDCRICHLGVETS---GGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 146 NVTGTYE--ADSTEQRNVSNDATTATTAAAVVVPPHSTEAQNFWQGHRFLNFLLACMVFA 205
           NV G  E    + E+R + N   TA           +T  +N WQ  R +N +LACMVF 
Sbjct: 141 NVGGANEMVGSTMEERELRNGEETAAGEGG-----GATVVENRWQPQRVVNLVLACMVFG 200

Query: 206 FVISWLFHFKIPS 217
           F ISW+FHF + S
Sbjct: 201 FFISWIFHFHVSS 205

[Close]

BLAST of Tan0022186 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29
Identity = 70/159 (44.03%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 87  RDCRICHLSLDASNHES-------------------------------GIPIELGCSCKD 146
           RDCRICHL L+ +                                   G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 147 DLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSNDATTATTAAAVV 206
           DL  AH  CAE WFKIKG++TCEICG++A NV G       EQ N  + A+T + AAA  
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAA-G 198

Query: 207 VPPHSTEAQNFWQGHRFLNFLLACMVFAFVISWLFHFKI 215
                TE +  W G   +NFLLA MVFAFV+SWLFHFK+
Sbjct: 199 QSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Tan0022186 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17
Identity = 55/158 (34.81%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 15  EQEERPRRVSNAGTDASPVSDDVRRCSGQSRAEIVGAAAAEKRRESSVSEFSVEMDLECG 74
           E+EE  ++      + S ++ DV  CS    A +V    A+     S +E   ++     
Sbjct: 27  EEEEDVKKPQQGKENDSRMAKDVVSCSSNISAHVVHEEVADNVTAVSCNEAESDISKAKA 86

Query: 75  LAEIKVHLAKI-ERDCRICHLSLDASNHESGIP-------IELGCSCKDDLAAAHKHCAE 134
                + L+ + ER CRICH   D S   SG         IE+GC CK++L  AH HCAE
Sbjct: 87  KEFHTIDLSGVGERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAE 146

Query: 135 AWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNVSND 165
           AWFK++G+  CEICG  A NVT     D + +R+ + D
Sbjct: 147 AWFKLRGNSVCEICGCTAKNVTVRLMEDWSGERDNTLD 184

The following BLAST results are available for this feature:

BLAST of Tan0022186 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0022186 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957596.1	9.2e-102	88.89	uncharacterized protein LOC111458938 [Cucurbita moschata]	[more]
KAG6602635.1	4.6e-101	88.94	hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990745.1	4.6e-101	88.89	uncharacterized protein LOC111487535 [Cucurbita maxima]	[more]
XP_023524419.1	1.9e-99	87.56	uncharacterized protein LOC111788319 [Cucurbita pepo subsp. pepo]	[more]
XP_022938531.1	2.1e-98	87.50	uncharacterized protein LOC111444740 [Cucurbita moschata] >XP_022938532.1 unchar...	[more]

BLAST of Tan0022186 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZN3	4.5e-102	88.89	uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A6J1JQX9	2.2e-101	88.89	uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535...	[more]
A0A6J1FEB0	1.0e-98	87.50	uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]
A0A6J1JXH7	2.8e-96	86.11	uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196...	[more]
A0A0A0K8G0	6.1e-91	80.44	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00942...	[more]

BLAST of Tan0022186 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	4.8e-56	58.97	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	9.7e-33	52.63	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	4.8e-32	52.63	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.9e-29	44.03	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	5.7e-17	34.81	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 88..141 e-value: 5.6E-17 score: 72.4
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 89..140 e-value: 8.3E-9 score: 35.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 81..147 score: 16.952343
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 76..150 e-value: 9.7E-14 score: 52.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR46214:SF30	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 10..216
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 10..216
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 89..141 e-value: 2.58618E-10 score: 52.3296
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 86..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0022186.1	Tan0022186.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding