Tan0021738 (gene) Snake gourd v1

Overview


Name	Tan0021738
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA-binding protein 24 isoform X1
Location	LG10: 57569895 .. 57575870 (+)
RNA-Seq Expression	Tan0021738
Synteny	Tan0021738

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCTTTCCCTTCCCTCCTCCCCTTCTTCCCTTCTTCCCTCCCTCGCAGTCCCCATTTCACTTTCTCTTTTTTTTTTTCATCTCTGACCTAATTGTCTGTCTCTCTTCTTCTCATCTCCCCATTCTCTTTCTCTTTTCTCTCCTCACCCACCCTTTTCTTCTCCTCCGATCTAACCCCCAAAAATACAAAAAAAAAAAAACTCCATAGATTTAGAGAAGTCTCTCTGTAATAACAAAGAAAGAAAGAAAGAAAGAAAGCAAACAAGAAGATCAACGGAAGATATATCATTATAAGATTAAAGAAGATGATGACTCCATCTAACTTGGCCGGTCAGTTTGGAGACACCACTTACACCAAGGTTTTCGTGGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATATTTTGAACAGTTCGGCGATATCTTGGAAGCCGTTGTTATTACCGACAAGGCCACTGGTCGATCCAAAGGCTATGGTTTTGTAAGTTCCTTCTTCCTTCCTTCCTTCTTTCTTGTTACTCTTAAATCTTTTTTTTTTAATATCACATTTTTCCCCTTTTATTTCAGGTCACTTTCCGGGAACCCGACGCCGCCATGAGAGCTTGTGTTGACGCTGCTCCGGTCATCGATGGCCGGAGAGCTAATTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCCAAACCCTCCACACCCAAACACGGTATTCTGACTCTTAACTCAGATCTATAACGCCCCGTTTCATAACTATTTTTAAAAATTATGTTCACAATTTCTCTTTTATTATCTACCATCATTTTTATTTTTCTTGAATAACTATTTAATTTTTTAGCTAAAATACGAAAAAAAAAAGTTTAATATTAATTTTTTTAGTATATTTAAAAATATTTCATTATTTTTGGCAAACCCGCTTGTGGATTTTTTTTTTTTTTTTAAGATAACGTAAAAGATGAAATATTTATAGTCATCATTTAGGCAGACCCAGTTATAGTAATTTTTTTTTCTGGGACAATGTAAAAGATGAAATATTTGATTGGAGAAACGAAGGTTATGGTAATTTATGTTTTTTGTTTTGGGACGATGAAATAATATTTAATGTGTTGGATTTATGAAACATGTAGTTAGTTAGTTGATGACATGTACATGGTCTAAGTGTTTGATTTGTTTTTTCTTTTTTTTTTTTTTTTTTGGGTGTGTGCTTAAAATTTGTGTTAAAAGAAAAAAAGAAATGGGAATTGACAGGAGGAGGAGGTGGTGGAGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCAACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATGTCTATGGGTAATTATTATTATTTTTTTTTTATTTTTTATTTATTACTCTAATGTCTCTGTATATATATTATCATAATCATCATATGTATTTTTTTTCTCTTTCTCTCTCTACAACGTGCATTGCCAACTCATTTCTTCACTTTACTTTATTACAAACATTAAAGTTTTTCCTTCTTCATCACTCTAAATTCATTCATATAAATCATATCCTCTTTAAGTTACTACAAAACTCTTTCTCATCTCATGCATTAAATTCGCTTCCTTTTGCTCTTTCCATTTTTTCTTTTACTGCATGCATGCATTGCATTTTTTTTTTTTTTTTGGTTTTAATGTATCTACATTAATTAATTGGGTGTTGTTAATTACTTTATTATTGCTGTTTTTTTAGGTATTCTTCCTATTCGCCCGACTATACTTACCCTACGGTTTGTACTATCTTCTCCTTCTATAACTCTTTCTAGTTGTCATTTGTCAAATCATTCTATTCTAATATCTTTCATCATCCAATTCATAAAGAATCCTTAAATGGAATAATTTTTTACAAAGGAAAAAAAAATACTATACACAAGAAGAAAAAAAGAGTTTTGATTAAGATCTTAAATGTCAATCTCAATGAGAATGTTGTATAGATAAAATGTCAATGGCCATGAATATTTATAAAATATTCAAATGAAAAATTATTTTACCATTTTTGAATAAGTTCAAATTTTTATTGTTAACATTATGTCTAGTGTCTACCCATTATCAAAATTTTTTGATATTTTTCTTATATTTTATTAATTTGTTATTGTATCATGAAAATGTGGAGTATATAAATTATTAAATTTTTAACTTCAAATCAATTATTATTGAGTTACTATTTTCTTTTAAAAATATTGATTTATCCCTTGCAGCGATAGCTTGAGAATGATAGATTGAAATGTGACACATCCATGAAATTTAGGACGGTAAAATTTGTGGAGGGGAGGAGGCTATAATTGGAAGTGAATTGAAATAAAAGAATCTGTACATTGTCTGGTCAAACTGTTGAAAAGTGAAAGTTAAGAGACCCATTCTGGTGTTTCTTCTCTTGTCGTTTTATTCAAATGTTTGTTTCTAGATTTAATATGGTAACAGTAAATCACTTTGTTACTGTCTTACAACTTTTTTTTTTTTTTTTTTGGGTTAGTGAAACAGTTTTTCGTTACACTTTTTTCATGCACATAATCATGAACCTGCCGACTGCAAGCCGACCAATTTGGAATATAATTTTTTCTGAACAAAAACACACTTCTGATTCAGAATGCGACATCACCAACATAAGCAAAAAAACAAAAATAAAAATAAAAAATAACCAAATTATAGAATAAAAATAGTGTTGTTTATTTATTTATCTTTTTACATGTCGGTTTTCAATTTGTTTCAGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCTATGTACGGAACCGGTCCCGGCGGCATAATGAGCGGTGCGGCAGCTGCGGCGGCGGCGTTCTACCCGTATTTCCAGTTCGGGGAAGGAAGCGGCGGCGGAGCGAATGGGTTCACCGCCGGTTCCGGCCAGCAGGGTTATGGGGTTCAGTACCCTCACCATCTTTTTCAGTACTCGGCGGCCATTAATTCAACTGCAACGACGTTCCCTCAGCACTACGCTGGTCCTCCCATGTCTCTCCCACCCACGCCACCCACCTTGCCATCAGGTTTGTGCTGTTTATGTTTAACGGTTAAATATATGTTTTAGTCTCGGACTTTCGATATCATTTATGGCTTCGTTTGATGGCGATTTTATTTTTAGGGTTTAAATTTAAAAGATGATGCTGGCTTAGTTTCTTAGAATTTTTTTCCGACTCTTTAAACACATTTTAAGCCAATTTTAAAAACATAAATTAAAGTTTCTTTTTCTTCTCAAACTATATCACAAAATATATAGGACATGTTTGGAGTACAAGGTATAATATTTTGTAGAATGCTATGCACTCCAAGCATCTAGATTAAACAATTATGCATTTTAAATAATATTATATGACTTCATATATTATAATAACGTACAATTATTATAACTCATTCATTATTCAACACTCCTATTCATTAAGTGGGACGTGGAGGCAGTATTTATCAAATAAGATCTAAAAGTTTCATCTGGTCTCTTAGCAACCATTTTCAATTATACACACTTTTGGTTCTGAAAGCCAAATGTAGCAAAAATAAGCCTAAATAATATGATATTTAGTGAGCGGGTACAAATTCAATGAAAGAACTAAGCTATTCGTCTGGTAGATCAATTCTTTGTGATCGTTATTTTAAGTATTAGTTGGGTTTATTTTATTTATTTATTTTTTCAATTTTCGTGATATTAAAGTGGGTTACACAATATGTAGGTGCAACTCAAATTAGATTGAGGTTGTTTTTCTTCGCAAGACTAAATTAAAAGATTAGAAACATTAAGAATGAGTATATACATTTAGTGTTGTTGTTGTTTTATTTTAATTTTAAAGTTAAATAAGTGATTTTGGTTATGGGAGTGTGAATGGAAAGACGTACTAATATCTTTGACAGTGTTTTTTGCTGTCCCACAGGCGTGACCATGGCTCTTCCTGCACCAATCCCACATCGCTAGAGAGACACACAAAAGCTTCATCTCAACAGCCTATCCCACATCGTCAAAATTTCCCTCTCGAAGTATCAAACAAATTTAAAAACACCACGCCTTCGCCCTAACCATGGTTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTAACACCAAACACATGCCTTTAGCATATATTGTGTGTGGAATTCCATATATGCTTTTGGCCAATCCCAGCCCCTCGTCGGGACTGAACCATCCTCCAAATTGGAGCAAAATCATCATGCATTTTCATTTTTCATTTCAAAAGATAAAAGCTAAAGTGGTTCCTTTTATCAAGCGAACCAAAAGCACTTTTGTGATGGGGTCAAAAAACCCCAACTTTTGCCATCAACGGATTTGGCTTCTAAGTTGGCAAAATTCTGCACATAGCGTCGTTTTAGTCTATGCTATTATTATAAAAAGGGCTGATCCCCTTTTCTTTTCTTTTTTGTTGTAACTCTTGATGAGCCTAGGGACGGCTCTTAAGGATATAACAACAAACACTTTTCCAAAAAACACTTCTTGGGTTTGCAAATAAATTGTACATTTCATTCTAAACACAGCACACCCTTTTAAAAATCAATCAAGTTTTGGACTGAAAAAGCTAATATTTTTCTCAACTTGATCATCATCATCTGTAATTAAATTTCAATTAGGAGTAATATCAGAAGAAATTCAGATTTTAAAAGAATTGGTGGGGCAAGGGATGCCCCCACCTTTTTCTTCAAATTAGGACCAATCACCAAGTTTTAGAATTAGTGGATGGATAGATTGTCTCTTCTTCTTCTTCTTCTTCTTTGTTAATTTTTTTTTTTTCTTACAAATTAATTTAGTGTTAGTTTGGTCTAATCAACCAACCAGTTTGACATATTCCCTTTGGGCTAAGGGGAGTAGTACTGAAACCCTTTTTTATTCATTAACTCTTAAGCACATTAGTTTCTTGTAATTAAAATTCACAAACAATCGTGGTTGAACTTATGGGAGTTACAACCTCGTTTATTTTTGGTAAACCAAAGCACAAATATTGCTCTTGGTTTAACATTTTATTTTTATTATTATTATTTCTTTTTTTTTGGTGCATTTAGGTTTCATAATTAGAAATTTAGGATTAGGTTTAAGCATCCATCATTTTGAGAGTGTCCATTAATGGATATGGAGCTCTCAAAATAAGCATTTTGCATGTGAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTCTTCTTCACTAACCCTACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTTTCTTTCTTTCTTTCTTCATCATGTTTCCTTTCTTAATTTCTTCAGTATTCCCATTTTACCCCTCTTCATCATCCAATCATCTTCCCTTTGTTTCTTTTTATGTGCCTGTGTGTTCAAGGACTTTCTCTTCATGGAGTTGGTGGACCTTGGAAACACTGTTTTTAATTAATTATGTCTGTAAAAGAAGAGCCTTTTTCTTTTTTCTCTTTCTTTCTTCATGTCTTTTTATGGTTTGTAATGTAATTAGATATGATGCTCTACTACTACCTCTACCTTTCTTTTATATCAGGACTTCTACTAAGATTCAGTTCTTCATGATATCAGCCTGCTCTATCTTTTGCAGCTGCTTGAAGAATAACCTACCTACCTCAATATTAATTGCTTCTTTCTCTCTAAATTATTTAGTCTCTCAACTTCAATTTGTCCGACCTAGTTTTCATGTTTTCAAATTAGTCTTTTTGTTTGAGTTGGAGGATTCAAACTACAAATTTCATGATCGTTAACACATTCAGTATGTTAGTTGAGCTATGCTCTCTTTTGATTATTTTCAAATTAGTCTTGATAGTGAACAATCAATGTGTGTTGGCCTAGTGATCAATCCGAACCATATAAATAATAAAAGGTTTAGACGGAATGGATTCAAGCCAGTGTGGCAACCCTACC

mRNA sequence

TTTGCTTTCCCTTCCCTCCTCCCCTTCTTCCCTTCTTCCCTCCCTCGCAGTCCCCATTTCACTTTCTCTTTTTTTTTTTCATCTCTGACCTAATTGTCTGTCTCTCTTCTTCTCATCTCCCCATTCTCTTTCTCTTTTCTCTCCTCACCCACCCTTTTCTTCTCCTCCGATCTAACCCCCAAAAATACAAAAAAAAAAAAACTCCATAGATTTAGAGAAGTCTCTCTGTAATAACAAAGAAAGAAAGAAAGAAAGAAAGCAAACAAGAAGATCAACGGAAGATATATCATTATAAGATTAAAGAAGATGATGACTCCATCTAACTTGGCCGGTCAGTTTGGAGACACCACTTACACCAAGGTTTTCGTGGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATATTTTGAACAGTTCGGCGATATCTTGGAAGCCGTTGTTATTACCGACAAGGCCACTGGTCGATCCAAAGGCTATGGTTTTGTCACTTTCCGGGAACCCGACGCCGCCATGAGAGCTTGTGTTGACGCTGCTCCGGTCATCGATGGCCGGAGAGCTAATTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCCAAACCCTCCACACCCAAACACGAAAAAAAGAAATGGGAATTGACAGGAGGAGGAGGTGGTGGAGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCAACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATGTCTATGGGTATTCTTCCTATTCGCCCGACTATACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCTATGTACGGAACCGGTCCCGGCGGCATAATGAGCGGTGCGGCAGCTGCGGCGGCGGCGTTCTACCCGTATTTCCAGTTCGGGGAAGGAAGCGGCGGCGGAGCGAATGGGTTCACCGCCGGTTCCGGCCAGCAGGGTTATGGGGTTCAGTACCCTCACCATCTTTTTCAGTACTCGGCGGCCATTAATTCAACTGCAACGACGTTCCCTCAGCACTACGCTGGTCCTCCCATGTCTCTCCCACCCACGCCACCCACCTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATCCCACATCGCTAGAGAGACACACAAAAGCTTCATCTCAACAGCCTATCCCACATCGTCAAAATTTCCCTCTCGAAGTATCAAACAAATTTAAAAACACCACGCCTTCGCCCTAACCATGGTTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTAACACCAAACACATGCCTTTAGCATATATTGTGTGTGGAATTCCATATATGCTTTTGGCCAATCCCAGCCCCTCGTCGGGACTGAACCATCCTCCAAATTGGAGCAAAATCATCATGCATTTTCATTTTTCATTTCAAAAGATAAAAGCTAAAGTGGTTCCTTTTATCAAGCGAACCAAAAGCACTTTTGTGATGGGGTCAAAAAACCCCAACTTTTGCCATCAACGGATTTGGCTTCTAAGTTGGCAAAATTCTGCACATAGCGTCGTTTTAGTCTATGCTATTATTATAAAAAGGGCTGATCCCCTTTTCTTTTCTTTTTTGTTGTAACTCTTGATGAGCCTAGGGACGGCTCTTAAGGATATAACAACAAACACTTTTCCAAAAAACACTTCTTGGGTTTGCAAATAAATTGTACATTTCATTCTAAACACAGCACACCCTTTTAAAAATCAATCAAGTTTTGGACTGAAAAAGCTAATATTTTTCTCAACTTGATCATCATCATCTGTAATTAAATTTCAATTAGGAGTAATATCAGAAGAAATTCAGATTTTAAAAGAATTGGTGGGGCAAGGGATGCCCCCACCTTTTTCTTCAAATTAGGACCAATCACCAAGTTTTAGAATTAGTGGATGGATAGATTGTCTCTTCTTCTTCTTCTTCTTCTTTGTTAATTTTTTTTTTTTCTTACAAATTAATTTAGTGTTAGTTTGGTCTAATCAACCAACCAGTTTGACATATTCCCTTTGGGCTAAGGGGAGTAGTACTGAAACCCTTTTTTATTCATTAACTCTTAAGCACATTAGTTTCTTGTAATTAAAATTCACAAACAATCGTGGTTGAACTTATGGGAGTTACAACCTCGTTTATTTTTGGTAAACCAAAGCACAAATATTGCTCTTGGTTTAACATTTTATTTTTATTATTATTATTTCTTTTTTTTTGGTGCATTTAGGTTTCATAATTAGAAATTTAGGATTAGGTTTAAGCATCCATCATTTTGAGAGTGTCCATTAATGGATATGGAGCTCTCAAAATAAGCATTTTGCATGTGAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTCTTCTTCACTAACCCTACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTTTCTTTCTTTCTTTCTTCATCATGTTTCCTTTCTTAATTTCTTCAGTATTCCCATTTTACCCCTCTTCATCATCCAATCATCTTCCCTTTGTTTCTTTTTATGTGCCTGTGTGTTCAAGGACTTTCTCTTCATGGAGTTGGTGGACCTTGGAAACACTGTTTTTAATTAATTATGTCTGTAAAAGAAGAGCCTTTTTCTTTTTTCTCTTTCTTTCTTCATGTCTTTTTATGGTTTGTAATGTAATTAGATATGATGCTCTACTACTACCTCTACCTTTCTTTTATATCAGGACTTCTACTAAGATTCAGTTCTTCATGATATCAGCCTGCTCTATCTTTTGCAGCTGCTTGAAGAATAACCTACCTACCTCAATATTAATTGCTTCTTTCTCTCTAAATTATTTAGTCTCTCAACTTCAATTTGTCCGACCTAGTTTTCATGTTTTCAAATTAGTCTTTTTGTTTGAGTTGGAGGATTCAAACTACAAATTTCATGATCGTTAACACATTCAGTATGTTAGTTGAGCTATGCTCTCTTTTGATTATTTTCAAATTAGTCTTGATAGTGAACAATCAATGTGTGTTGGCCTAGTGATCAATCCGAACCATATAAATAATAAAAGGTTTAGACGGAATGGATTCAAGCCAGTGTGGCAACCCTACC

Coding sequence (CDS)

ATGATGACTCCATCTAACTTGGCCGGTCAGTTTGGAGACACCACTTACACCAAGGTTTTCGTGGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATATTTTGAACAGTTCGGCGATATCTTGGAAGCCGTTGTTATTACCGACAAGGCCACTGGTCGATCCAAAGGCTATGGTTTTGTCACTTTCCGGGAACCCGACGCCGCCATGAGAGCTTGTGTTGACGCTGCTCCGGTCATCGATGGCCGGAGAGCTAATTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCCAAACCCTCCACACCCAAACACGAAAAAAAGAAATGGGAATTGACAGGAGGAGGAGGTGGTGGAGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCAACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATGTCTATGGGTATTCTTCCTATTCGCCCGACTATACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCTATGTACGGAACCGGTCCCGGCGGCATAATGAGCGGTGCGGCAGCTGCGGCGGCGGCGTTCTACCCGTATTTCCAGTTCGGGGAAGGAAGCGGCGGCGGAGCGAATGGGTTCACCGCCGGTTCCGGCCAGCAGGGTTATGGGGTTCAGTACCCTCACCATCTTTTTCAGTACTCGGCGGCCATTAATTCAACTGCAACGACGTTCCCTCAGCACTACGCTGGTCCTCCCATGTCTCTCCCACCCACGCCACCCACCTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATCCCACATCGCTAG

Protein sequence

MMTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

Homology

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BLAST of Tan0021738 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-26
Identity = 104/275 (37.82%), Postives = 135/275 (49.09%), Query Frame = 0


Query: 1   MMTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGY 60
           M T +N+ G FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGY
Sbjct: 1   MTTSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGY 60

Query: 61  GFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGG 120
           GFVTF++  AA RAC D+ P+I+GRRANCNLASLG +  K  T    ++      G   G
Sbjct: 61  GFVTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQ------GPKNG 120

Query: 121 GRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQ--QGIPYNVYGYSSYSPDYTYPTSYY 180
            R      +     G +    + S  T   +  Q  Q +P+  YGY S    Y  P   +
Sbjct: 121 NR------ATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPF--YGYPS---AYVAPNMTF 180

Query: 181 NVYGGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQ 240
           N   G      M G          +     +Y +  +    GGG     A S    +   
Sbjct: 181 NQKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMY----GGGRVMVGAASPMVPFYTV 240

Query: 241 YPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPP 274
           YP+H         S A  FPQ     P+S   TPP
Sbjct: 241 YPYH--------QSQAIGFPQPSFSKPLSF-STPP 245

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BLAST of Tan0021738 vs. ExPASy Swiss-Prot
Match: Q5ZJX4 (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.1e-23
Identity = 87/212 (41.04%), Postives = 104/212 (49.06%), Query Frame = 0


Query: 13  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 72
           DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 73  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRVLSSFQT 132
           RAC D  P+IDGR+AN NLA LG   +KP                           S QT
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP--------------------------RSIQT 126

Query: 133 GFGGNVGS---AFHSTP--TFPHYAVQQG-------IPYNVYGYSSYSPDYTYPTSYYNV 192
           GF   V     AF   P    PHY   Q        IP  V   +S   DYT  +  Y+ 
Sbjct: 127 GFTIGVQQLHPAFIQRPFGLTPHYVYPQAIIQPSVVIPTPVQSIASPYIDYTAASQAYSQ 179

Query: 193 YGGATAQYPMYGTGPGGIMSGAAAAAAAFYPY 213
           Y   TA Y  Y          AA+ AA F  Y
Sbjct: 187 Y--TTAAYDQY--------PYAASPAAGFVGY 179

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BLAST of Tan0021738 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.1e-23
Identity = 89/229 (38.86%), Postives = 111/229 (48.47%), Query Frame = 0


Query: 13  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 72
           DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 73  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRVLSSFQT 132
           RAC D  P+IDGR+AN NLA LG   +KP                       R++   Q 
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP-----------------------RIM---QP 126

Query: 133 GFGGNVGSAFHSTPTFPHYAVQQGIP-YNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMY 192
           GF   V     +    P      GIP + VY  +   P    P         +T  Y  Y
Sbjct: 127 GFAFGVQQLHPALIQRPF-----GIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDY 186

Query: 193 GTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYP 241
                   S AAAAAAA   Y Q+   +   A G+    G  GY VQ P
Sbjct: 187 TGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGG-YGYAVQQP 200

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BLAST of Tan0021738 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 89/229 (38.86%), Postives = 111/229 (48.47%), Query Frame = 0


Query: 13  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 72
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 73  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRVLSSFQT 132
           RAC D  P+IDGR+AN NLA LG   +KP                       R++   Q 
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP-----------------------RIM---QP 126

Query: 133 GFGGNVGSAFHSTPTFPHYAVQQGIP-YNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMY 192
           GF   V     +    P      GIP + VY  +   P    P         +T  Y  Y
Sbjct: 127 GFAFGVQQLHPALIQRPF-----GIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDY 186

Query: 193 GTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYP 241
                   S AAAAAAA   Y Q+   +   A G+   +G   Y VQ P
Sbjct: 187 TGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVT-TGGYSYAVQQP 200

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BLAST of Tan0021738 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-22
Identity = 85/220 (38.64%), Postives = 108/220 (49.09%), Query Frame = 0


Query: 13  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 72
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 73  RACVDAAPVIDGRRANCNLASL-------------GVQRSKPS-------TPKHEKKKWE 132
           RAC D  P+IDGR+AN NLA L             GVQ+  P+        P H      
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALVQRPYGIPAHYVYPQA 126

Query: 133 LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYT 192
               G        +    QT          +++  +  YA      Y+ Y Y++      
Sbjct: 127 YVQQG------LVIPHVQQTAAASTSPYIDYTSAAYAQYAAAAAAAYDQYPYAASPATTG 186

Query: 193 YPTSYYNVYGGATAQYPMYGTGPGGIMSGAAAAAAAFYPY 213
           Y T+    YG A  Q P+    PG     AAAAAAAF  Y
Sbjct: 187 YVTA--AGYGYAVPQ-PLTAATPG----TAAAAAAAFAQY 213

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BLAST of Tan0021738 vs. NCBI nr
Match: XP_022930178.1 (RNA-binding protein 38 isoform X1 [Cucurbita moschata] >XP_022974074.1 RNA-binding protein 38 isoform X1 [Cucurbita maxima])

HSP 1 Score: 552.4 bits (1422), Expect = 2.4e-153
Identity = 272/289 (94.12%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTPSN+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT  GGGGG
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT--GGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYN+YGYSSYSPDY YPTSYYNVY
Sbjct: 121 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPH 241
           GGATAQYPMYGTGPGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPH
Sbjct: 181 GGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPH 240

Query: 242 HLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           HL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 287

[Close]

BLAST of Tan0021738 vs. NCBI nr
Match: KAG6592286.1 (putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 547.7 bits (1410), Expect = 5.9e-152
Identity = 270/289 (93.43%), Postives = 275/289 (95.16%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTPSN+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT   GGGG
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT---GGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYN+YGYSSYSPDY YPTSYYNVY
Sbjct: 121 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPH 241
           GGATAQYPMY TGPGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPH
Sbjct: 181 GGATAQYPMYSTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPH 240

Query: 242 HLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           HL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 286

[Close]

BLAST of Tan0021738 vs. NCBI nr
Match: XP_023535742.1 (RNA-binding protein 38-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.7 bits (1410), Expect = 5.9e-152
Identity = 270/289 (93.43%), Postives = 275/289 (95.16%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTPSN+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNIASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT    GGG
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT----GGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYN+YGYSSYSPDY YPTSYYNVY
Sbjct: 121 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPH 241
           GGATAQYPMYGTGPGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPH
Sbjct: 181 GGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPH 240

Query: 242 HLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           HL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 285

[Close]

BLAST of Tan0021738 vs. NCBI nr
Match: XP_022157230.1 (RNA-binding protein 24 isoform X1 [Momordica charantia])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 275/291 (94.50%), Postives = 282/291 (96.91%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTP+NLA QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT  GGGGG
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT--GGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYN+YGYSSYSPDYTYPTSYYNVY
Sbjct: 121 RNFRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQ-GYGVQY 241
           GGATAQYPMYGTGPGGIM+GAAAAAAAFYPYFQFGEGS GGG NGFTAGSGQQ GYGVQY
Sbjct: 181 GGATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQY 240

Query: 242 PHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           PHHLFQYSAAINS+AT+FPQHYA PPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 PHHLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 289

[Close]

BLAST of Tan0021738 vs. NCBI nr
Match: XP_022973423.1 (probable RNA-binding protein ARP1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 263/291 (90.38%), Postives = 273/291 (93.81%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           M+P+NL  QFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MSPANLGAQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTP HEKKKWEL GGGGGGG
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKWELAGGGGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLS FQ+GFGGNVGSAFHSTPTFPHYAV QGIPYN+YGYSSYSPD+TYPTSYYNVY
Sbjct: 121 RNFRVLSCFQSGFGGNVGSAFHSTPTFPHYAVHQGIPYNLYGYSSYSPDFTYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGS--GGGANGFTAGSGQQGYGVQY 241
           GGATAQYP+Y TGPGG+MSG    AAAFYPYFQFGEGS  GGGANGF+ GSGQQGYGVQY
Sbjct: 181 GGATAQYPVYSTGPGGLMSG----AAAFYPYFQFGEGSGGGGGANGFSVGSGQQGYGVQY 240

Query: 242 PHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           PHHLFQYSA INSTATTFPQHY GPPMSLPPTPPTLPSGVTMAL APIPHR
Sbjct: 241 PHHLFQYSAGINSTATTFPQHYGGPPMSLPPTPPTLPSGVTMALTAPIPHR 287

[Close]

BLAST of Tan0021738 vs. ExPASy TrEMBL
Match: A0A6J1IGG9 (RNA-binding protein 38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 272/289 (94.12%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTPSN+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT  GGGGG
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT--GGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYN+YGYSSYSPDY YPTSYYNVY
Sbjct: 121 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPH 241
           GGATAQYPMYGTGPGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPH
Sbjct: 181 GGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPH 240

Query: 242 HLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           HL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 287

[Close]

BLAST of Tan0021738 vs. ExPASy TrEMBL
Match: A0A6J1EUB1 (RNA-binding protein 38 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436682 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 272/289 (94.12%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTPSN+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT  GGGGG
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT--GGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYN+YGYSSYSPDY YPTSYYNVY
Sbjct: 121 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPH 241
           GGATAQYPMYGTGPGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPH
Sbjct: 181 GGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPH 240

Query: 242 HLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           HL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 287

[Close]

BLAST of Tan0021738 vs. ExPASy TrEMBL
Match: A0A6J1DSJ0 (RNA-binding protein 24 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023991 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.3e-152
Identity = 275/291 (94.50%), Postives = 282/291 (96.91%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTP+NLA QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT  GGGGG
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELT--GGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYN+YGYSSYSPDYTYPTSYYNVY
Sbjct: 121 RNFRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQ-GYGVQY 241
           GGATAQYPMYGTGPGGIM+GAAAAAAAFYPYFQFGEGS GGG NGFTAGSGQQ GYGVQY
Sbjct: 181 GGATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQY 240

Query: 242 PHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           PHHLFQYSAAINS+AT+FPQHYA PPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 PHHLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 289

[Close]

BLAST of Tan0021738 vs. ExPASy TrEMBL
Match: A0A6J1ID05 (probable RNA-binding protein ARP1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471971 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.2e-148
Identity = 263/291 (90.38%), Postives = 273/291 (93.81%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           M+P+NL  QFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MSPANLGAQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTP HEKKKWEL GGGGGGG
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKWELAGGGGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLS FQ+GFGGNVGSAFHSTPTFPHYAV QGIPYN+YGYSSYSPD+TYPTSYYNVY
Sbjct: 121 RNFRVLSCFQSGFGGNVGSAFHSTPTFPHYAVHQGIPYNLYGYSSYSPDFTYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGS--GGGANGFTAGSGQQGYGVQY 241
           GGATAQYP+Y TGPGG+MSG    AAAFYPYFQFGEGS  GGGANGF+ GSGQQGYGVQY
Sbjct: 181 GGATAQYPVYSTGPGGLMSG----AAAFYPYFQFGEGSGGGGGANGFSVGSGQQGYGVQY 240

Query: 242 PHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           PHHLFQYSA INSTATTFPQHY GPPMSLPPTPPTLPSGVTMAL APIPHR
Sbjct: 241 PHHLFQYSAGINSTATTFPQHYGGPPMSLPPTPPTLPSGVTMALTAPIPHR 287

[Close]

BLAST of Tan0021738 vs. ExPASy TrEMBL
Match: A0A6J1IAD7 (RNA-binding protein 24 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 264/289 (91.35%), Postives = 269/289 (93.08%), Query Frame = 0


Query: 2   MTPSNLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 61
           MTPSN+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 62  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 121
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH          GGGGG
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH----------GGGGG 120

Query: 122 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDYTYPTSYYNVY 181
           RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYN+YGYSSYSPDY YPTSYYNVY
Sbjct: 121 RNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVY 180

Query: 182 GGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPH 241
           GGATAQYPMYGTGPGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPH
Sbjct: 181 GGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPH 240

Query: 242 HLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR 291
           HL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 279

[Close]

BLAST of Tan0021738 vs. TAIR 10
Match: AT1G33470.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 261.5 bits (667), Expect = 7.8e-70
Identity = 159/275 (57.82%), Postives = 190/275 (69.09%), Query Frame = 0


Query: 13  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 72
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 73  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRVLSSFQT 132
           +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H          G  GGR  +V S F+T
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH----------GHVGGRGMKVTSPFKT 122

Query: 133 GFGGNVGSAFHSTPTFPHYAVQQGIPY-NVYGYSSYSPDYTYPTSYYNVYGGATAQYPMY 192
            F G   +A  S   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMY
Sbjct: 123 HF-GTAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMY 182

Query: 193 GTGPGGIMSGAAAA-AAAFYPYFQFGEGSGGGANGFTAGSGQQGYG-VQYPHHLFQYSAA 252
           G+GP   M+G AAA AA FYPY QF EG+G             GY  + YP+H+F YSA 
Sbjct: 183 GSGP---MTGVAAAPAAGFYPYLQFAEGNG----------PVTGYAPLHYPNHMFHYSA- 242

Query: 253 INSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP 285
                  +P H+ G P+SL P+ P +PS V  A+P
Sbjct: 243 ---PGGNYP-HHNGSPVSLAPS-PVIPS-VCFAVP 242

[Close]

BLAST of Tan0021738 vs. TAIR 10
Match: AT1G33470.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.9e-68
Identity = 159/276 (57.61%), Postives = 190/276 (68.84%), Query Frame = 0


Query: 13  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 72
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 73  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRVLSSFQT 132
           +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H          G  GGR  +V S F+T
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH----------GHVGGRGMKVTSPFKT 122

Query: 133 GFGGNVGSAFHSTPTFPHYAVQQGIPY-NVYGYSSYSPDYTYPT-SYYNVYGGATAQYPM 192
            F G   +A  S   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PM
Sbjct: 123 HF-GTAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHPM 182

Query: 193 YGTGPGGIMSGAAAA-AAAFYPYFQFGEGSGGGANGFTAGSGQQGYG-VQYPHHLFQYSA 252
           YG+GP   M+G AAA AA FYPY QF EG+G             GY  + YP+H+F YSA
Sbjct: 183 YGSGP---MTGVAAAPAAGFYPYLQFAEGNG----------PVTGYAPLHYPNHMFHYSA 242

Query: 253 AINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP 285
                   +P H+ G P+SL P+ P +PS V  A+P
Sbjct: 243 ----PGGNYP-HHNGSPVSLAPS-PVIPS-VCFAVP 243

[Close]

BLAST of Tan0021738 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-60
Identity = 145/262 (55.34%), Postives = 168/262 (64.12%), Query Frame = 0


Query: 12  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 71
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 72  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRV-LSSF 131
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP H         GGGG   N RV +S+ 
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH---------GGGGRINNMRVMMSTM 127

Query: 132 QTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 191
           QTGFG          PTF HY     +P N++GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 QTGFGPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 192 PMYG--TGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQY 251
            +YG     GG ++ AAA+A  FYP        GGG  G      Q  Y     HHL  Y
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYP-------CGGGHGGVQFSQPQPFY-----HHLSSY 232

Query: 252 SAAINSTATTFPQHYAGPPMSL 269
           +          P HY+ P  S+
Sbjct: 248 N----------PHHYSPPTFSM 232

[Close]

BLAST of Tan0021738 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 229.6 bits (584), Expect = 3.3e-60
Identity = 149/277 (53.79%), Postives = 173/277 (62.45%), Query Frame = 0


Query: 12  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 71
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 72  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRV-LSSF 131
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP H         GGGG   N RV +S+ 
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH---------GGGGRINNMRVMMSTM 127

Query: 132 QTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 191
           QTGFG          PTF HY     +P N++GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 QTGFGPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 192 PMYG--TGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQY 251
            +YG     GG ++ AAA+A  FYP        GGG  G      Q  Y     HHL  Y
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYP-------CGGGHGGVQFSQPQPFY-----HHLSSY 247

Query: 252 SAAINSTATTFPQHYAGPPMSL-------PPTPPTLP 277
           +          P HY+ P  S+       P  PP +P
Sbjct: 248 N----------PHHYSPPTFSMQQGVTGFPLQPPLIP 247

[Close]

BLAST of Tan0021738 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-59
Identity = 148/281 (52.67%), Postives = 173/281 (61.57%), Query Frame = 0


Query: 12  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 71
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 72  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGGRNFRV-LSSF 131
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP H         GGGG   N RV +S+ 
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH---------GGGGRINNMRVMMSTM 127

Query: 132 QTGFGGNVGSAFHSTPTFPHYAVQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 191
           QTGFG          PTF HY     +P N++GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 QTGFGPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 192 PMYG--TGPGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQY 251
            +YG     GG ++ AAA+A  FYP        GGG  G      Q  Y     HHL  Y
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYP-------CGGGHGGVQFSQPQPFY-----HHLSSY 247

Query: 252 SAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPI 288
           +          P HY+ P  S+        S  T +   P+
Sbjct: 248 N----------PHHYSPPTFSMQQGSRNRLSASTTSYSLPL 251

The following BLAST results are available for this feature:

BLAST of Tan0021738 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	2.3e-26	37.82	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q5ZJX4	4.1e-23	41.04	RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1	[more]
Q9BX46	9.1e-23	38.86	RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1	[more]
D3Z4I3	1.2e-22	38.86	RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1	[more]
Q9I8B3	1.6e-22	38.64	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]

BLAST of Tan0021738 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930178.1	2.4e-153	94.12	RNA-binding protein 38 isoform X1 [Cucurbita moschata] >XP_022974074.1 RNA-bindi...	[more]
KAG6592286.1	5.9e-152	93.43	putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023535742.1	5.9e-152	93.43	RNA-binding protein 38-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022157230.1	1.3e-151	94.50	RNA-binding protein 24 isoform X1 [Momordica charantia]	[more]
XP_022973423.1	1.5e-147	90.38	probable RNA-binding protein ARP1 isoform X1 [Cucurbita maxima]	[more]

BLAST of Tan0021738 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IGG9	1.2e-153	94.12	RNA-binding protein 38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE...	[more]
A0A6J1EUB1	1.2e-153	94.12	RNA-binding protein 38 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436682 ...	[more]
A0A6J1DSJ0	6.3e-152	94.50	RNA-binding protein 24 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023991...	[more]
A0A6J1ID05	7.2e-148	90.38	probable RNA-binding protein ARP1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1IAD7	2.1e-147	91.35	RNA-binding protein 24 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE...	[more]

BLAST of Tan0021738 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33470.2	7.8e-70	57.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G33470.1	1.9e-68	57.61	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.2	1.5e-60	55.34	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.1	3.3e-60	53.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.3	4.8e-59	52.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 18..90 e-value: 1.2E-21 score: 88.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 19..74 e-value: 1.7E-15 score: 56.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 17..101 score: 16.551298
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..120 e-value: 3.5E-23 score: 84.0
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 2..283
None	No IPR available	PANTHER	PTHR11176:SF16	OS01G0876800 PROTEIN	coord: 2..283
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 17..92 e-value: 1.30097E-40 score: 133.895
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 16..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021738.1	Tan0021738.1	mRNA
Tan0021738.2	Tan0021738.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding