
Tan0021638 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGAAGTGGAAACCCATAAACTTCCTCTTCATCTTTGGCTTCTTCAACTTTCACCATTTGGCAAATGGATTTTCATTTTGCTTGCAAATCGCTTTTGTTAACCTTCCTGCTAACGTCACCGGCGGTGAGATTTGTAGCGGGAGATGAAGAGAAAGACAAAGAGGAATGCACGCAGCAATTGGCTGGGATGGCCACGTGTCTGCCGTACGTGAGCGGTGACGCAAAGGCTCCGACGCACGACTGTTGCACTGGGCTGAAGGAAGTGCTTAACAACAACAAGAAGTGCTTGTGCGTTATAGTTAAAGACCGAAATGACCCTGACTTGGGGCTTCAAATTAATGTCACACTTGCCTTGGGCCTGCCTGATGTTTGCCATGCCCCTGCCAATGTCTCCAATTGTCCTGGTAAATTCGATTTTTCTAAGCTAAATATATGTTTTAATCTTTAACGTTGGTGTATTTTTTCAATTTAGTTTCCCGTTGTTTCAAATGTTTGGATTAGTTCGGTATGTATTAACATTTTTCAACTTAGTCCTTTATTGTTACTGGATGCTTAAATTGATTGATAACACGCTTACACGAAATAAAATTTGATGAATCGATGGAAATTTATAAAATTCAAAAGACCATCTAAGTGATGGGAACTTGAAATTTTAACGAATTTCTAACAAATTTGGAGGAATTAGAAACTCTGTCTCTTCAATGATTTTTTCCCCTTCTGTAGAAAGGAATTGAAACCTTCATCTTATATAATATAGCTTGAGCTGCACTCATCTATTGTGCAACCTATTTTTAACCACAAGATTTTTCTGTTTAAAAAAAATCAATTTTTTTTTCATGTGCTTGGAAAGTGGGTTGCATCTAAATATTTTATTAGAATTGGCTAATGATAAGCTTATCTTGCATAATCTTAAGTGAGTCATAGAAATTGAGAAGAGAAATTAAGTCACTTAAGAGTCATGTTAATAACAATTTTATTTGTAGTTTTATGTTTTTAAAACTTGTGTTTGTTTCCTCAGTGGTTTTCACATTTCTTACAAATTTTTTTTTTGAATTCTTAGTCAAATTCTAAATTCTAAAATCAAGTTTTTAAGAAATGCGATCCTATTTGATAACTATTTTGGTTTTTGAAAATTAAGCTTAAAAATACTACTTTACATGTGAGATTTTTTGTTTTGATATCTACTTTCTACCATTGTTTCTAAAAACCAAGTCAAGTTTTAAAAACTTAAAAAAAAAAGTTTTATTTTTAGAATTTGACTAAAAAAATTCAAATGTTTATTGAAGAAAGGTAAAAATCATAGTACGAAATTGTATGATAGATTTCAAAAATAAAAACACAATGTTTATTAAACATGCCTATTTTTTTTTTTAGTTTTTAAAATTTGACTTCATTTTTTAAAATTTTTTAAAAAATAGATAACAAAAAAATAAACTTATAGGTGAAACTAGTGTTTATAAGCCTAATTTTCAAATTCTAAAATCTAAAAACCATGGTCATCAAATTGAGGTCTAAAAGTTTTTTATTCCTCCTAAGAAGTTCGTTTCTCTAAAATATCATGTCATGCAAACTTACCTTAATTAATTAAAAAATATGAAAACATTAGAAACTAAATTGAAAAAGCGCTCCAACATTATCGACTTAAAAGCATACATGTAGCCAAATTTTTAAAAATATTCTAATGTGTGATTTGTGTAAAAAACAGCTCTTTTAAACTTGCCACCCAATTCACCAGAGGCTCAAGTTTTCTATCAATTGGGCATGGCCAAAAGCTCCTCTGCTGCTGCAGCAGCAGCAGCTGCTCCCATAAGTCCTTCTCCTACCATTAATTCCACTGGTAATTTGACTCTCAACTTTCTAAAATTTTTTACTTTGGAAAAAAAAAAAATATTGGGCATTAATGGTTTTGAATTTTTTTTTTTCATCTTCTTCAAAATTGCAGTTGGAGGGGGAAGTAGAATTGGACCAGACAAGGGTGAAGCTTACAACATTGGAAAGAAATGGCTGCCATTGAAGACTTTGGTTGTTGGAGCTCTTTCGCTTTTGTTTTTGTTGGAATCATATCATGTTTAGACAATAATGTGTTTGGTCATGTTCATGATGTTATATCTATAAATCCTATATTTGATGTGTTTTGTTTCA AAAAGGAAGTGGAAACCCATAAACTTCCTCTTCATCTTTGGCTTCTTCAACTTTCACCATTTGGCAAATGGATTTTCATTTTGCTTGCAAATCGCTTTTGTTAACCTTCCTGCTAACGTCACCGGCGGTGAGATTTGTAGCGGGAGATGAAGAGAAAGACAAAGAGGAATGCACGCAGCAATTGGCTGGGATGGCCACGTGTCTGCCGTACGTGAGCGGTGACGCAAAGGCTCCGACGCACGACTGTTGCACTGGGCTGAAGGAAGTGCTTAACAACAACAAGAAGTGCTTGTGCGTTATAGTTAAAGACCGAAATGACCCTGACTTGGGGCTTCAAATTAATGTCACACTTGCCTTGGGCCTGCCTGATGTTTGCCATGCCCCTGCCAATGTCTCCAATTGTCCTGCTCTTTTAAACTTGCCACCCAATTCACCAGAGGCTCAAGTTTTCTATCAATTGGGCATGGCCAAAAGCTCCTCTGCTGCTGCAGCAGCAGCAGCTGCTCCCATAAGTCCTTCTCCTACCATTAATTCCACTGTTGGAGGGGGAAGTAGAATTGGACCAGACAAGGGTGAAGCTTACAACATTGGAAAGAAATGGCTGCCATTGAAGACTTTGGTTGTTGGAGCTCTTTCGCTTTTGTTTTTGTTGGAATCATATCATGTTTAGACAATAATGTGTTTGGTCATGTTCATGATGTTATATCTATAAATCCTATATTTGATGTGTTTTGTTTCA ATGGATTTTCATTTTGCTTGCAAATCGCTTTTGTTAACCTTCCTGCTAACGTCACCGGCGGTGAGATTTGTAGCGGGAGATGAAGAGAAAGACAAAGAGGAATGCACGCAGCAATTGGCTGGGATGGCCACGTGTCTGCCGTACGTGAGCGGTGACGCAAAGGCTCCGACGCACGACTGTTGCACTGGGCTGAAGGAAGTGCTTAACAACAACAAGAAGTGCTTGTGCGTTATAGTTAAAGACCGAAATGACCCTGACTTGGGGCTTCAAATTAATGTCACACTTGCCTTGGGCCTGCCTGATGTTTGCCATGCCCCTGCCAATGTCTCCAATTGTCCTGCTCTTTTAAACTTGCCACCCAATTCACCAGAGGCTCAAGTTTTCTATCAATTGGGCATGGCCAAAAGCTCCTCTGCTGCTGCAGCAGCAGCAGCTGCTCCCATAAGTCCTTCTCCTACCATTAATTCCACTGTTGGAGGGGGAAGTAGAATTGGACCAGACAAGGGTGAAGCTTACAACATTGGAAAGAAATGGCTGCCATTGAAGACTTTGGTTGTTGGAGCTCTTTCGCTTTTGTTTTTGTTGGAATCATATCATGTTTAG MDFHFACKSLLLTFLLTSPAVRFVAGDEEKDKEECTQQLAGMATCLPYVSGDAKAPTHDCCTGLKEVLNNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPNSPEAQVFYQLGMAKSSSAAAAAAAAPISPSPTINSTVGGGSRIGPDKGEAYNIGKKWLPLKTLVVGALSLLFLLESYHV Homology
BLAST of Tan0021638 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.3e-49 Identity = 104/177 (58.76%), Postives = 129/177 (72.88%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 9.0e-46 Identity = 93/180 (51.67%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 3.0e-33 Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.1e-22 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12 Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 0
BLAST of Tan0021638 vs. NCBI nr
Match: XP_038899115.1 (non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida]) HSP 1 Score: 334.3 bits (856), Expect = 7.0e-88 Identity = 167/198 (84.34%), Postives = 177/198 (89.39%), Query Frame = 0
BLAST of Tan0021638 vs. NCBI nr
Match: KAG6593339.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025687.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 324.3 bits (830), Expect = 7.3e-85 Identity = 166/200 (83.00%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of Tan0021638 vs. NCBI nr
Match: XP_022150545.1 (protein YLS3-like [Momordica charantia]) HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84 Identity = 166/200 (83.00%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of Tan0021638 vs. NCBI nr
Match: XP_023004343.1 (protein YLS3-like [Cucurbita maxima]) HSP 1 Score: 322.0 bits (824), Expect = 3.6e-84 Identity = 163/200 (81.50%), Postives = 172/200 (86.00%), Query Frame = 0
BLAST of Tan0021638 vs. NCBI nr
Match: XP_023513729.1 (protein YLS3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.0 bits (824), Expect = 3.6e-84 Identity = 163/197 (82.74%), Postives = 171/197 (86.80%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy TrEMBL
Match: A0A6J1D8S3 (protein YLS3-like OS=Momordica charantia OX=3673 GN=LOC111018659 PE=3 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84 Identity = 166/200 (83.00%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy TrEMBL
Match: A0A6J1KZ76 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111497688 PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84 Identity = 163/200 (81.50%), Postives = 172/200 (86.00%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy TrEMBL
Match: A0A6J1H6P3 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111460690 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 8.7e-84 Identity = 162/197 (82.23%), Postives = 172/197 (87.31%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy TrEMBL
Match: A0A1S3CDS0 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103499877 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 3.1e-65 Identity = 139/193 (72.02%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Tan0021638 vs. ExPASy TrEMBL
Match: A0A0A0K6P6 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430130 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 3.4e-64 Identity = 135/185 (72.97%), Postives = 150/185 (81.08%), Query Frame = 0
BLAST of Tan0021638 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 196.8 bits (499), Expect = 1.6e-50 Identity = 104/177 (58.76%), Postives = 129/177 (72.88%), Query Frame = 0
BLAST of Tan0021638 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 184.9 bits (468), Expect = 6.4e-47 Identity = 93/180 (51.67%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of Tan0021638 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34 Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 0
BLAST of Tan0021638 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33 Identity = 75/187 (40.11%), Postives = 114/187 (60.96%), Query Frame = 0
BLAST of Tan0021638 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 6.5e-23 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|