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Tan0021552 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAACAAGAGAGGCGAGGTCTCCAAACTCGGACGGCGGACCTCACCGTGTCAGCTAGAGAGTGTGCGCGATTTTATCTGTGCTAGATTCCGATCGGTTGCACACATGAGTGACGTGACGAAGGAGCGCGCCATCCTCTTGTACGCCATTGTCACTGGCAAGACGATTGATGTAGGCAAAGTCATCAGTCGATACATCAGGCACGTGCAGCGAGGCACGATCACGGGCGGACTAGGCCATCTCTCTCTCATCACCGCCCTCTTTCGTCTTGCCGGAGTGACCTGGACATCTGAGGAGGAGCTGATTCACCCCAAATGGATAAAAACAACATCATGGGACTTCGGGATCATGATCAAAGAGTACTTGTGGGGATGCAAGCAGACGAGCCAGAATTTTTCCTTGACGCAGTCGAGGGTGTGATGGGAGAGGAGAGGCAGCATGAGTCACCACAGCGCCCTGCCCCACAGGAGTACCAGGATCTGGTTCAAGCCATGGCTAGACTCGAGCAGTGGTTCGACCAGCATGAGACTCAGAGTCGTAGGGAGGAGCGCCGGATCATGAGACATCTGCAGTACAGTGAGGCCTCTCACCGCCATCTTTATGACTGTCTCCGACACATTCATGGTGCAGATCCTTCATTCCCGGGCCCTATGCCTCCCTACACCTCTTCTGATGAGGAATGA ATGGGTAACAAGAGAGGCGAGGTCTCCAAACTCGGACGGCGGACCTCACCGTGTCAGCTAGAGAGTGTGCGCGATTTTATCTGTGCTAGATTCCGATCGGTTGCACACATGAGTGACGTGACGAAGGAGCGCGCCATCCTCTTGTACGCCATTGTCACTGGCAAGACGATTGATGTAGGCAAAGTCATCAGTCGATACATCAGGCACGTGCAGCGAGGCACGATCACGGGCGGACTAGGCCATCTCTCTCTCATCACCGCCCTCTTTCACGAGCCAGAATTTTTCCTTGACGCAGTCGAGGGTGTGATGGGAGAGGAGAGGCAGCATGAGTCACCACAGCGCCCTGCCCCACAGGAGTACCAGGATCTGGTTCAAGCCATGGCTAGACTCGAGCAGTGGTTCGACCAGCATGAGACTCAGAGTCGTAGGGAGGAGCGCCGGATCATGAGACATCTGCAGTACAGTGAGGCCTCTCACCGCCATCTTTATGACTGTCTCCGACACATTCATGGTGCAGATCCTTCATTCCCGGGCCCTATGCCTCCCTACACCTCTTCTGATGAGGAATGA ATGGGTAACAAGAGAGGCGAGGTCTCCAAACTCGGACGGCGGACCTCACCGTGTCAGCTAGAGAGTGTGCGCGATTTTATCTGTGCTAGATTCCGATCGGTTGCACACATGAGTGACGTGACGAAGGAGCGCGCCATCCTCTTGTACGCCATTGTCACTGGCAAGACGATTGATGTAGGCAAAGTCATCAGTCGATACATCAGGCACGTGCAGCGAGGCACGATCACGGGCGGACTAGGCCATCTCTCTCTCATCACCGCCCTCTTTCACGAGCCAGAATTTTTCCTTGACGCAGTCGAGGGTGTGATGGGAGAGGAGAGGCAGCATGAGTCACCACAGCGCCCTGCCCCACAGGAGTACCAGGATCTGGTTCAAGCCATGGCTAGACTCGAGCAGTGGTTCGACCAGCATGAGACTCAGAGTCGTAGGGAGGAGCGCCGGATCATGAGACATCTGCAGTACAGTGAGGCCTCTCACCGCCATCTTTATGACTGTCTCCGACACATTCATGGTGCAGATCCTTCATTCCCGGGCCCTATGCCTCCCTACACCTCTTCTGATGAGGAATGA MGNKRGEVSKLGRRTSPCQLESVRDFICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITALFHEPEFFLDAVEGVMGEERQHESPQRPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIHGADPSFPGPMPPYTSSDEE Homology
BLAST of Tan0021552 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]) HSP 1 Score: 90.1 bits (222), Expect = 2.2e-14 Identity = 73/210 (34.76%), Postives = 101/210 (48.10%), Query Frame = 0
BLAST of Tan0021552 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]) HSP 1 Score: 90.1 bits (222), Expect = 2.2e-14 Identity = 73/210 (34.76%), Postives = 101/210 (48.10%), Query Frame = 0
BLAST of Tan0021552 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus]) HSP 1 Score: 89.7 bits (221), Expect = 2.8e-14 Identity = 71/210 (33.81%), Postives = 97/210 (46.19%), Query Frame = 0
BLAST of Tan0021552 vs. NCBI nr
Match: EOY08849.1 (Uncharacterized protein TCM_024087 [Theobroma cacao]) HSP 1 Score: 68.2 bits (165), Expect = 8.9e-08 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Tan0021552 vs. NCBI nr
Match: PON97548.1 (hypothetical protein TorRG33x02_067500 [Trema orientale]) HSP 1 Score: 66.2 bits (160), Expect = 3.4e-07 Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0
BLAST of Tan0021552 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 73/210 (34.76%), Postives = 101/210 (48.10%), Query Frame = 0
BLAST of Tan0021552 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 73/210 (34.76%), Postives = 101/210 (48.10%), Query Frame = 0
BLAST of Tan0021552 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14 Identity = 71/210 (33.81%), Postives = 97/210 (46.19%), Query Frame = 0
BLAST of Tan0021552 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 5.1e-09 Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Tan0021552 vs. ExPASy TrEMBL
Match: A0A061F2U9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.3e-08 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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